KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:18 2014 Check: 00 .. Name: ENSTTRP00000015006/1-205 Len: 207 Check: 1229 Weight: 1.00 Name: ENSP00000328178/1-205 Len: 207 Check: 7233 Weight: 1.00 Name: ENSBTAP00000001128/1-207 Len: 207 Check: 5587 Weight: 1.00 Name: bmy_02293T0/1-190 Len: 207 Check: 8410 Weight: 1.00 Name: BACU003797/1-206 Len: 207 Check: 2928 Weight: 1.00 // 1 50 ENSTTRP00000015006/1-205 MAASTASHRP IKGILKIKSA ATSSVVASAE QPGRSVDEEL SKKSQKWDEM ENSP00000328178/1-205 MAASTASHRP IKGILKNKTS TTSSMVASAE QPRGNVDEEL SKKSQKWDEM ENSBTAP00000001128/1-207 MAASTASHRP IKGILKNKSS TTSSVVSSAE QPGKSVDEEL SKKSQKWDEM bmy_02293T0/1-190 MAASTASHRP IKGILKNKSS TTSSVVASAE QPGRSVDEEL SKKSQKWDEM BACU003797/1-206 MAASTASHRP IKGILKNKSS TTSSVVASAE QPGRSVDEEL SKKSQKWDEM 51 100 ENSTTRP00000015006/1-205 NILATYHPAD KDYGLMKIDE PSTPYHSMVG DDEDALSDSE TTEALTPDIL ENSP00000328178/1-205 NILATYHPAD KDYGLMKIDE PSTPYHSMMG DDEDACSDTE ATEAMAPDIL ENSBTAP00000001128/1-207 NILATYHPAD KDYGLMKIDE PSTPYHSMVA DDEDALSDSE TTEALTPDIL bmy_02293T0/1-190 NILATYHPAD KDYGLMKIDE PSTPYHSMVG DDEDALSDSE TTEALTPDIL BACU003797/1-206 NILATYHPAD KDYGLMKIDE PSTPYHSMVG DDEDALSDSE TTEALTPDIL 101 150 ENSTTRP00000015006/1-205 ARXX--XXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXKKR QFEMKRKLHY ENSP00000328178/1-205 ARKL--AAAE GLEPKYRIQE QESSGEEDSD LSPEEREKKR QFEMKRKLHY ENSBTAP00000001128/1-207 ARKLTAAAAE SLEPKYRVRE QESSGDEDSD LSPEEREKKR QFEMKRKLHY bmy_02293T0/1-190 ARKLT-AAAE SSEPKCRVRE QESSEDEDSD LSPEER---- ---------- BACU003797/1-206 ARKLT-AAAE SSEPKCRVRE QESSEDEDSD LSPEEQEKKR QFEMKRKLHY 151 200 ENSTTRP00000015006/1-205 NEGLNIKLAR QLISKDLRDE EEDEEMSETA AGESMNTEES NQGSTTCDQL ENSP00000328178/1-205 NEGLNIKLAR QLISKDLHDD DEDEEMLETA DGESMNTEES NQGSTPSDQQ ENSBTAP00000001128/1-207 NEGLNIKLAR QLISKDLNDE EEDEEMSETA AGESMNMEES SQGSATSDQL bmy_02293T0/1-190 --GLNIKLAR QLISKDLRDE EEDEEMSETA AGESMNTEES NQGSTTCDQL BACU003797/1-206 NEGLNIKLAR QLISKDLHDE EEDEEMSETA AGESMNTEES NQGSTTCDQL 201 250 ENSTTRP00000015006/1-205 QNKSQSS ENSP00000328178/1-205 QNKLRSS ENSBTAP00000001128/1-207 QNKSQSS bmy_02293T0/1-190 RNKSQSS BACU003797/1-206 QNKSQSS