KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:24 2014 Check: 00 .. Name: ENSTTRP00000016218/1-510 Len: 527 Check: 7973 Weight: 1.00 Name: ENSBTAP00000001147/1-486 Len: 527 Check: 3120 Weight: 1.00 Name: ENSP00000381634/1-487 Len: 527 Check: 4122 Weight: 1.00 Name: bmy_09836T0/1-356 Len: 527 Check: 9821 Weight: 1.00 Name: BACU007952/1-475 Len: 527 Check: 320 Weight: 1.00 // 1 50 ENSTTRP00000016218/1-510 MMHFKSGLEL TELQNMTVPE DDNISNDSNE FTEVENGQIN SKFISDRESR ENSBTAP00000001147/1-486 MMHFKSGLEL TELQNMTVPE DDNISNDSND FTEVENGQIN SKFISDRESR ENSP00000381634/1-487 MMHFKSGLEL TELQNMTVPE DDNISNDSND FTEVENGQIN SKFISDRESR bmy_09836T0/1-356 ---------- ---------- ---------- ---------- ---------- BACU007952/1-475 MMHFKSGLEL TELQNMTVPE DDNISNDSND FTEVENGQIN SKFISDRESR 51 100 ENSTTRP00000016218/1-510 RSLTNSHLEK KKCDDYIPGT TSLGMSVFNL SNAIMGSGIL GLAFALANTG ENSBTAP00000001147/1-486 RSLTNSHLEK KKCDDYIPGT TSLGMSVFNL SNAIMGSGIL GLAFALANTG ENSP00000381634/1-487 RSLTNSHLEK KKCDEYIPGT TSLGMSVFNL SNAIMGSGIL GLAFALANTG bmy_09836T0/1-356 ---------- ---------- ---------- ---------- ---------- BACU007952/1-475 RSLTNSHLEK KKCDDYIPGT TSLGMSVFNL SNAIMGSGIL GLAFALANTG 101 150 ENSTTRP00000016218/1-510 ILLF------ --LLSIYSIN LLLICSKRTG CMVYEKLGEQ VFGTTGKLVI ENSBTAP00000001147/1-486 ILLFLVLLTS VTLLSIYSIN LLLICSKETG CMVYEKLGEQ VFGTTGKLVI ENSP00000381634/1-487 ILLFLVLLTS VTLLSIYSIN LLLICSKETG CMVYEKLGEQ VFGTTGKFVI bmy_09836T0/1-356 ---------- ---------- ---------- -MVYEKLGEQ VFGTTGKLVI BACU007952/1-475 ILLFLVLLTS VTLLSIYSIN LLLICSKETG CMVYEKLGEQ VFGTTGKLVI 151 200 ENSTTRP00000016218/1-510 FGATSLQNTG AMLSYLFIVK NELPSAIKFL MGKEETFSAW YVDGRLLVVV ENSBTAP00000001147/1-486 FGATSLQNTG AMLSYLFIVK NELPSAIKFL MGKEEEFSAW YVDGRLLVVV ENSP00000381634/1-487 FGATSLQNTG AMLSYLFIVK NELPSAIKFL MGKEETFSAW YVDGRVLVVI bmy_09836T0/1-356 FGATSLQNTG AMLSYLFIVK NELPSAIKFL MGKEETFSAW YVDGRLLVVV BACU007952/1-475 FGATSLQNTG AMLSYLFIVK NELPSAIKFL MGKEETFSAW YVDGRLLVVV 201 250 ENSTTRP00000016218/1-510 VTFGIILPLC LLKNLGYLGY TSGFSLSCMV FFLIVVIYKK FQIPCIVSEL ENSBTAP00000001147/1-486 VTFGIILPLC LLKNLGYLGY TSGFSLSCMV FFLIVVIYKK FKITCSVPEL ENSP00000381634/1-487 VTFGIILPLC LLKNLGYLGY TSGFSLSCMV FFLIVVIYKK FQIPCIVPEL bmy_09836T0/1-356 VTFGIILPLC LLKNLGYLGY TSGFSLSCMV FFLIVVIYKK FQIPCIVPEL BACU007952/1-475 VTFGIILPLC LLKNLGYLGY TSGFSLSCMV FFLIVVIYKK FQIPCIVPEL 251 300 ENSTTRP00000016218/1-510 NSTISANSTN AGMCTPKYVT FNSKTVYALP TIAFAFVCHP SVLPIYSELK ENSBTAP00000001147/1-486 NSTIP-NSTN PDMCTPKYVT FNSKTVYALP TIAFAFVCHP SVLPIYSELK ENSP00000381634/1-487 NSTISANSTN ADTCTPKYVT FNSKTVYALP TIAFAFVCHP SVLPIYSELK bmy_09836T0/1-356 NSTISANSTN AAMCTPKYVT FNSKTVYALP TIAFAFVCHP SVLPIYSELK BACU007952/1-475 NSTISANSTN ADMCTPKYVT FNSKTVYALP TIAFAFVCHP SVLPIYSELK 301 350 ENSTTRP00000016218/1-510 DRSQKKMQMV SNISFFAMFV MYFLTAIFGY LTFYENVHSD LLHKYQSKDD ENSBTAP00000001147/1-486 DRSQKKMQMV SNISFFAMFV MYFLTAIFGY LTFYESVQSD LLHKYQSKND ENSP00000381634/1-487 DRSQKKMQMV SNISFFAMFV MYFLTAIFGY LTFYDNVQSD LLHKYQSKDD bmy_09836T0/1-356 DRSQKKMQMV SNISFFAMFV MYFLTAIFGY LTFYENVHSD LLHKYQSKDD BACU007952/1-475 DRSQKKMQMV SNISFFAMFV MYFLTAIFGY LTFYENVHSD LLHKYQSKDD 351 400 ENSTTRP00000016218/1-510 ILILTVRLAV IVAVILTVPV LFFTVRSSLF ELAKKTKFNL CRHVFVTFIL ENSBTAP00000001147/1-486 ILILTVRLAV IMAVILTVPV LFFTVRSSLF ELAKKTKFNL CRQVLVTILL ENSP00000381634/1-487 ILILTVRLAV IVAVILTVPV LFFTVRSSLF ELAKKTKFNL CRHTVVTCIL bmy_09836T0/1-356 ILILTVRLAV IVAVILTVPV LFFTVRSSLF ELAKKTKFNL CRHVLVTFIL BACU007952/1-475 ILILTVRLAV IVAVILTVPV LFFTVRSSLF ELAKKTKFNL CRHVLVTFIL 401 450 ENSTTRP00000016218/1-510 LVIINLLVIF IPSMKDIFGV VGVTSANMLI FILPSSLYLK ITKME----- ENSBTAP00000001147/1-486 LVIINLLVIF IPSMKDIFGV VGVTSANMLI FILPSSLYLK ITSQDGDKGT ENSP00000381634/1-487 LVVINLLVIF IPSMKDIFGV VGVTSANMLI FILPSSLYLK ITDQDGDKGT bmy_09836T0/1-356 LVIINLLVIF IPSMKDIFGV VGVTSANMLI FILPSSLYLK ITSQDGDKGT BACU007952/1-475 LVIINLLVIF IPSMKDIFGV VGVTSANMLI FILPSSLYLK IT-------- 451 500 ENSTTRP00000016218/1-510 ----IKELNE FGLPFSWVWG WCFPWSAFPW LSTTGPAHQV VMRATETREK ENSBTAP00000001147/1-486 QQIWAALFLG LGVLFSLV-- -SIPLVIYDW AYSS------ ---------- ENSP00000381634/1-487 QRIWAALFLG LGVLFSLV-- -SIPLVIYDW ACSS------ ---------- bmy_09836T0/1-356 QQIWAALFLG LGVLFSLV-- -SIPLVIYDW ACSS------ ---------- BACU007952/1-475 ----AALFLG LGVLFSLV-- -SIPLVIYDW ACSS------ ---------- 501 550 ENSTTRP00000016218/1-510 ETSSYHSSAS PHRILCKFTE ANRNLQD ENSBTAP00000001147/1-486 ------SGDE GH-------- ------- ENSP00000381634/1-487 ------SSDE GH-------- ------- bmy_09836T0/1-356 ------SGDE GH-------- ------- BACU007952/1-475 ------SGDE GH-------- -------