KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:13:28 2014  Check: 00 ..

 Name: ENSP00000330361/1-229     Len:    261  Check:  938  Weight:  1.00
 Name: bmy_07536T0/1-248         Len:    261  Check:  5009  Weight:  1.00
 Name: ENSBTAP00000001168/1-188  Len:    261  Check:  9262  Weight:  1.00
 Name: ENSTTRP00000013146/1-218  Len:    261  Check:  8898  Weight:  1.00

//


                          1                                                   50
ENSP00000330361/1-229     MAALGHLAGE AAAAPGPGTP CASRGARLPG PVSS------ ---------- 
bmy_07536T0/1-248         HRAPKRPGPA HRAA--RALR NSATQACLAG SEFGVGPEAL LSLWLRLQRM 
ENSBTAP00000001168/1-188  MAAPGRPARE TAAA--PG-- ---------- ---------- ---------- 
ENSTTRP00000013146/1-218  MAAPGHPARE TSAA--PGTA HAPRSPRFPP PLPG------ ---------- 


                          51                                                 100
ENSP00000330361/1-229     -ARNPSTV-- CLCPEQPTCS NADSRAHPLG DEGGTASKKQ KNKKKTRNRA 
bmy_07536T0/1-248         AAPGHLARET SAAPGHPTCS DAVSRA---- -------KKQ KKKKKTRNGA 
ENSBTAP00000001168/1-188  ---------- ---PGRPTCR DAASRT---- -------KKQ --KKKTRDGA 
ENSTTRP00000013146/1-218  -APSPSTVRP YLCLGHRTCS DAASRA---- -------KKQ KKKKKTRNGA 


                          101                                                150
ENSP00000330361/1-229     SVANGGEKAS EKLAPEEVPL SAEAQ----- --------AQ QLAQELAWCV 
bmy_07536T0/1-248         SAANGGGKAT ETPAPEEAPL SAEAQARAGL SREGWSVGAE QLARELAWCV 
ENSBTAP00000001168/1-188  SVANGSGKTP EKQDPEEAPL SAEAQ----- --------AE QLARELAWCV 
ENSTTRP00000013146/1-218  SAANGGGKAT ESPASEGAPL SAEAQ----- --------AE QLARELAWCV 


                          151                                                200
ENSP00000330361/1-229     EQLELGLKRQ KPTPKQKEQA IGAIRTLRSK RTPLPRKRQL MHSLFGDYRA 
bmy_07536T0/1-248         EKLELGLKMQ RPTPKQKEQA LGAIRTLRSQ RTPLPRKRQL MRSLFGDYRA 
ENSBTAP00000001168/1-188  EKLELGLKMQ RPTPKQKEQA LGAIRTLRSQ RTPLPRKRQL MRSLFGDYRA 
ENSTTRP00000013146/1-218  EKLELGLKMQ RPTPKQKEQA LGAIRTLRSQ RTPLPRKRQL MHSLFGDYRA 


                          201                                                250
ENSP00000330361/1-229     QMEAEWREAL RALRAAAYSA QVQPVDGATR KKSQRVCRPR SIWRAKATLD 
bmy_07536T0/1-248         QMEAEWCVAL RALRTAAHSV QLQPVGEAAR KKSRRVCRPR LTGRAKDTLD 
ENSBTAP00000001168/1-188  QIEAEWREAL QALRTAAHSA QVQPVGEAAR KKSRRVCRPR PEGRSKGTSD 
ENSTTRP00000013146/1-218  QMEAEWCVAL RALRTAAHSV QVQPVGEAAR KKSRRVCRPR LTGRAKDTRD 


                          251                                                300
ENSP00000330361/1-229     MPDEEFRFNF F 
bmy_07536T0/1-248         TPHEEFRFNF F 
ENSBTAP00000001168/1-188  TRDEEFRFNF F 
ENSTTRP00000013146/1-218  TPDEEFRFNF F