KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:34 2014 Check: 00 .. Name: ENSBTAP00000001209/1-380 Len: 380 Check: 1789 Weight: 1.00 Name: ENSP00000265572/1-380 Len: 380 Check: 8302 Weight: 1.00 Name: ENSTTRP00000004556/1-377 Len: 380 Check: 3644 Weight: 1.00 Name: bmy_20346T0/1-291 Len: 380 Check: 9719 Weight: 1.00 Name: BACU002338/1-358 Len: 380 Check: 7607 Weight: 1.00 // 1 50 ENSBTAP00000001209/1-380 MEPPVQIFRG EPGPTCSPST CLPPNGSGWF PGWAEPDGNG SAGSEDVLLE ENSP00000265572/1-380 MDSPIQIFRG EPGPTCAPSA CLPPNSSAWF PGWAEPDSNG SAGSEDAQLE ENSTTRP00000004556/1-377 WRPLIQIFRE EPGSTA--PS CLPPNGSGRF PGWTEQSRND SAGY-DPRLE bmy_20346T0/1-291 ---------- ---------- ---------- ---------- ---------- BACU002338/1-358 ---------- ---------- --PPNGSGRV PGWAEPDRNS SAGAEDAPPE 51 100 ENSBTAP00000001209/1-380 PAHISPVILV IITAVYSVVF VVGLVGNSLV MFVIIRYTKM KTATNIYIFN ENSP00000265572/1-380 PAHISPAIPV IITAVYSVVF VVGLVGNSLV MFVIIRYTKM KTATNIYIFN ENSTTRP00000004556/1-377 PERISPVIPV IITAVYSVAF VVGLVGNSLV MFVIVRYTKM KTATNIYIFN bmy_20346T0/1-291 ---------- ---------- ---------- ---------M KTATNIYIFN BACU002338/1-358 LEHISPVIPV IITAVYSVVF VVGLVGNSLV MFVIVRYTKM KTATNIYIFN 101 150 ENSBTAP00000001209/1-380 LALADALVTT TMPFQSTVYL MNSWPFGDVL CKVVISIDYY NMFTSIFTLT ENSP00000265572/1-380 LALADALVTT TMPFQSTVYL MNSWPFGDVL CKIVISIDYY NMFTSIFTLT ENSTTRP00000004556/1-377 LALADALVTT TMPFQSTVYL MNSWPFGDVL CKIVISIDYY NMFTSIFTLT bmy_20346T0/1-291 LALADALVTT TMPFQSTVYL MNSWPFGDVL CKIVISIDYY NMFTSIFTLT BACU002338/1-358 LALADALVTT TMPFQSTVYL MNSWPFGDVL CKIVISIDYY NMFTSIFTLT 151 200 ENSBTAP00000001209/1-380 MMSVDRYIAV CHPVKALDFR TPLKAKIINI CIWILSSSVG ISAIVLGGTK ENSP00000265572/1-380 MMSVDRYIAV CHPVKALDFR TPLKAKIINI CIWLLSSSVG ISAIVLGGTK ENSTTRP00000004556/1-377 MMSVDRYIAV CHPVKALDFR TPLKAKVINI CIWILSSSVG ISAIVLGGTR bmy_20346T0/1-291 MMSVDRYIAV CHPVKALDFR TPLKAKIINI CIWILSSSVG ISAIVLGGTK BACU002338/1-358 MMSVDRYIAV CHPVKALDFR TPLKAKIINI CIWILSSSVG ISAIVLGGTK 201 250 ENSBTAP00000001209/1-380 VREDMEVIEC SLQFPDDDYS WWDLFMKVCV FVFAFVIPVL IIIVCYTLMI ENSP00000265572/1-380 VREDVDVIEC SLQFPDDDYS WWDLFMKICV FIFAFVIPVL IIIVCYTLMI ENSTTRP00000004556/1-377 VREDMDVVEC SLQFPDDDYS WWDLVMKICV FVFAFVIPVF IIIVCYTLMI bmy_20346T0/1-291 VREDMDVVEC SLQFPDDDYS WWDLFMKICV FVFAFVIPVL IIIVCYTLMI BACU002338/1-358 VREDMDVVEC SLQFPDDDYS WWDLFMKICV FVFAFVIPVL IIIVCYTLMI 251 300 ENSBTAP00000001209/1-380 LRLKSVRLLS GSREKDRNLR RITRLVLVVV AVFVVCWTPI HIFILVEALG ENSP00000265572/1-380 LRLKSVRLLS GSREKDRNLR RITRLVLVVV AVFVVCWTPI HIFILVEALG ENSTTRP00000004556/1-377 LRLKSVRLLS GSREKDRNLR RITRLVLVVV AVFVICWTPI HIFILVEALG bmy_20346T0/1-291 LRLKSVRLLS GSREKDRNLR RITRLVLVVV AVFVICWTPI HIFILVEALG BACU002338/1-358 LRLKSVRLLS GSREKDRNLR RITRLVLVVV AVFIICWTPI HIFILVEALG 301 350 ENSBTAP00000001209/1-380 STAHSTAALS SYYFCIALGY TNSSLNPILY AFLDENFKRC FRDFCFPIKM ENSP00000265572/1-380 STSHSTAALS SYYFCIALGY TNSSLNPILY AFLDENFKRC FRDFCFPLKM ENSTTRP00000004556/1-377 SSSYSTAALS SYYFCIALGY TNSSLNPILY AFLDENFKRC FRDFCFPIKM bmy_20346T0/1-291 SSSYSTAALS SYYFCIALGY TNSSLNPILY AFLDENFKRC FRDFCFPIKM BACU002338/1-358 SSSYSTAALS SYYFCIALGY TNSSLNPILY AFLDENFKRC FRDFCFPIKM 351 400 ENSBTAP00000001209/1-380 RMERQSTSRV RNTVQDPAYV REVDGVNKPV ENSP00000265572/1-380 RMERQSTSRV RNTVQDPAYL RDIDGMNKPV ENSTTRP00000004556/1-377 RMERQGTDRV RNTVQDPAHL RDADGINKPV bmy_20346T0/1-291 RMERQNTDRV RNTVQDPAHL RDADGMNKPV BACU002338/1-358 RMERQNTDRV RNTVQDPAHL RDADGVNKPV