KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:35 2014 Check: 00 .. Name: ENSP00000355735/1-678 Len: 699 Check: 2866 Weight: 1.00 Name: ENSBTAP00000001212/1-678 Len: 699 Check: 254 Weight: 1.00 Name: bmy_15941T0/1-697 Len: 699 Check: 2867 Weight: 1.00 Name: ENSTTRP00000010493/1-671 Len: 699 Check: 6288 Weight: 1.00 // 1 50 ENSP00000355735/1-678 -MEVLIGDPI TTCLSPSVYD IICNLGFQLR ENCDINSIVT QNGEVCWKTI ENSBTAP00000001212/1-678 MWEILVGEPI ATCLSPSVYD MICKLGFEVR ESCDISSIVT QNGEVCWKKI bmy_15941T0/1-697 -MEILIEDPI TTCLSPSVYD MICKLGFEAR ENCDISSIVT QNGEVCWTTI ENSTTRP00000010493/1-671 ---ILIEDPI TTCLSPSVYD TICKLGFEAR ENCDISSIVT QNGEVRWMTI 51 100 ENSP00000355735/1-678 TDCVSYTES- ---------- --------EQ GLDYWGSVRL LGPVCEAVHS ENSBTAP00000001212/1-678 TDCMVYTES- ---------- --------AQ GLDHPESVRL LGPVCQAVHL bmy_15941T0/1-697 TDCVVYTESG ICITRCGAVV LTCFLILEAQ GLDYGGSVRL LGPVCQAVHL ENSTTRP00000010493/1-671 TDCVVYTES- ---------- --------AQ GLDYGGSVRL LGPVCQAVHL 101 150 ENSP00000355735/1-678 HFLSLTKGQF EIRYAPWFQW TSFPELFPEI FDALESLQSP AISLSLMKLT ENSBTAP00000001212/1-678 HLSSLPEGQF EMRYAPALQW TGVPELFPEI LGALRSPESP SICLSLMKLS bmy_15941T0/1-697 HLSSLTKGQF ETRYSPGLQW TGVPELFPEM FDALGSLQSL AISLSLMKLT ENSTTRP00000010493/1-671 HLSSLTKGQF ETRXXXXXXX XXXXXLFPEM FDALGSLQSL AISLSLMKLT 151 200 ENSP00000355735/1-678 SCLERALGDV FLLIGKECPF LLRDLLSSEE LAQVFSQSVM NVLKVFVGSP ENSBTAP00000001212/1-678 SCLERALGDV YLLIGKDCPF LLRDLLASEE LAQVFGQPVM DVLKVFVGSP bmy_15941T0/1-697 SCLERALADV YLLIGKECPF LLRDLIASEE LAQVFGQSVM DVLKVFVGSP ENSTTRP00000010493/1-671 SCLERALGDV YLLIRKECPF LLRDLIASEE LSQVFGQSVM DVLKVFVGSP 201 250 ENSP00000355735/1-678 CGLNLRNVLW HGFASPEEIP PKYCSMMILL TAGLGQLLKS YLQNTKLTLA ENSBTAP00000001212/1-678 RGLNLRNVLW HGFAAPQEVP PKYCSMMVLL TAGLGQLLTG FLQQTNFTLA bmy_15941T0/1-697 CGLNLRNVLW HGFAAPQEIP PKYCSMMILL TAGLGQLLKG YLQQTKFTLA ENSTTRP00000010493/1-671 RGLNLRNVLW HGFAAPQEIP PKYCSMMILL TAGLGQLLKG YLQQTKFTLA 251 300 ENSP00000355735/1-678 HRSFISLTNL EDLIVFPDVT YEVLSVLEEV MMKSAFILKI MLPYWEVALV ENSBTAP00000001212/1-678 HRPFVTLTSL EDLIVFPDVT SEVLSVLEEV MKKSTFILKI MLPYWEVALT bmy_15941T0/1-697 HRPFITLTSL EDLIVFPDVT YEVLSVLEEV MKKSTFILKI MLPYWEVALI ENSTTRP00000010493/1-671 HRPFITLTSL EDLIVFPDVT YEVLSVLEEV MKKSTFILKI MLPYWEVALL 301 350 ENSP00000355735/1-678 KFKSHRFADC AILLLTQLET GLRNVFATLN RCPKRLLTAE STALYTTFDQ ENSBTAP00000001212/1-678 KLKSHRFADC AILLLMQLET GLRRVFAEVN ECPKRLLTAE STALYTTFDE bmy_15941T0/1-697 NFKSNRFADC AILLLVQLET GLRKVFATVN KCPKRLLTAE STALYTTFDE ENSTTRP00000010493/1-671 NFKSHRFADC AILLLVQLET GLRKVFATVN KCPKRLLTAE STALYTTFD- 351 400 ENSP00000355735/1-678 ILAKHLNDGK INQLPLFLGE PAMEFLWDFL NHQEGPRIRD HLSHGEINLH ENSBTAP00000001212/1-678 ILAKHLNDGK INQLPLFLGE PAMEFLWDFL NHQEGPRLRD RLSHGEVSLP bmy_15941T0/1-697 ILAKHLNDGK INQLPLFLGE PAMEFLWDFL NHQEGPRLRD RLSHGEISLP ENSTTRP00000010493/1-671 ILAKHLNDGK INQLPLFLGE PAMEFLWDFL NHQEGPRLRD RLSHGEISLP 401 450 ENSP00000355735/1-678 EFSKETTNQL LAFSLVLLLR FVDDCLLSVF K-EKSAVELL ISLAEGYSSR ENSBTAP00000001212/1-678 EFPKEAASQL LAFCFVLLLR FIDEDLLAVF K-EKAAVGSL INLAGTYVSR bmy_15941T0/1-697 EFPKEAANQL LAFSFVLLLR FIDEDLLSVF KQEKAAVRAL VSVAEAYSAR ENSTTRP00000010493/1-671 EFPKEAANQL LAFSFVLLLR FIDEDLLSVF K-EKAAVRAL VSIAEAYGAR 451 500 ENSP00000355735/1-678 CHPVFQLKKQ VLSCEESIRV WALLPFPEEL TRQAVRLEDN SETNACHSLI ENSBTAP00000001212/1-678 CHPASQLKKQ VLSCEGSVGA WPLLPLPEEA EREPVRSEGD SETDVCSSLI bmy_15941T0/1-697 CHPVSQLKKQ VLSCERSIGV WPLLPLPEGS EREAQRSEGN SEINACHSLI ENSTTRP00000010493/1-671 CHPVSQLKKQ VMRCDRSIGV WPLLPLLEES RE---RSEGN SEINACHSLI 501 550 ENSP00000355735/1-678 TKMTDELYHH MPENRCVLKD LDRLPTETWP QLLRELCSTP VPTLFCPRIV ENSBTAP00000001212/1-678 TEIVAELCCH VPETHRAAHL PGPLPPEEWP RLLHVLCSIP VQTLFCPRAV bmy_15941T0/1-697 TEIMAELCRH VPGAHRVPHD WEHLPPEKWP QLLRELCSIP VRTLFCPRAV ENSTTRP00000010493/1-671 TEIVAELCHH VPETHRVPHA SEHLRPEEWP QLLRELCSIP VRTLFCPRAV 551 600 ENSP00000355735/1-678 LEVLVVLRSI SEQCRRVSSQ VTVASELRHR QWVERTLRSR QRQNYLRMWS ENSBTAP00000001212/1-678 LEVLAVLRRV SVHCRRVCGQ VAVCVELRRR QWEDRSLRSR QRRNYLRLVR bmy_15941T0/1-697 LEVLAVLRKI GAHCRCVCGQ VAACAELRRR QWEDRSLRSR QRRNYLRLVH ENSTTRP00000010493/1-671 LEVLAVLRKI GAHCCRVCGQ VAACAELRRR QWEDRSLRSR QRRNYLRLVH 601 650 ENSP00000355735/1-678 SIRLLSPVLS LILLLIALEL VNIHAVCGKN AHEYQQYLKF VKSILQYTEN ENSBTAP00000001212/1-678 SMKLLSPMLY LILLLIALEL INIHMVLGKN ASEYQQYLRF LKCILQYTEN bmy_15941T0/1-697 SIKLLSPMLY LILLLIALEL VNIHVVLGKN TSEYQQYLRF LKSILQYTEN ENSTTRP00000010493/1-671 SIKLLFPMLY LILLLIALEL VNIHVVLGKN TSEYQQYLRF LKSVLQYTEN 651 700 ENSP00000355735/1-678 LVAYTSYEKN KWNETINLTH TALLKMWTFS EKKQMLIHLA KKSTSKVLL ENSBTAP00000001212/1-678 LAACTRQDRN KWDDAVRLTH TALLKIWTFI EKKQMLMHLA EKSTIKVV- bmy_15941T0/1-697 LAAYTSQDKN KWDEAVNLTQ AALLKIWTFS EKKQMLIHLA KKSTSKVV- ENSTTRP00000010493/1-671 LAAYTSQDKN KWDEAVNLTQ VALLKIWTFS EKKQMLIHLA KKSTSKVV-