KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:37 2014 Check: 00 .. Name: ENSBTAP00000001222/1-309 Len: 335 Check: 311 Weight: 1.00 Name: ENSP00000243056/1-330 Len: 335 Check: 524 Weight: 1.00 Name: bmy_04696T0/1-330 Len: 335 Check: 9928 Weight: 1.00 Name: BACU008083/1-79 Len: 335 Check: 450 Weight: 1.00 Name: ENSTTRP00000004278/1-335 Len: 335 Check: 7240 Weight: 1.00 // 1 50 ENSBTAP00000001222/1-309 ---------- ---------- -SAXESGS-- ---GGGSGGG GGSAGGAGVG ENSP00000243056/1-330 MTTSLLLHPR WPESLMYVYE DSAAESGI-- ---GGGGGGG GGGTGGAGGG bmy_04696T0/1-330 MTTSLLLHPR WPESLMYVYE DSAAESGS-- ---GGGGGGG GGGAGGAGGG BACU008083/1-79 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004278/1-335 MTTSLLLHPR WPESLMYVYE DSAAESGSGG GGGGGGGGGG GGGAGGAGGG 51 100 ENSBTAP00000001222/1-309 CSGASPGKAP SMDGLGNSCP ASHCRDLLPH PVLGRPPAPL GAPQGAVYTD ENSP00000243056/1-330 CSGASPGKAP SMDGLGSSCP ASHCRDLLPH PVLGRPPAPL GAPQGAVYTD bmy_04696T0/1-330 CSGASPGKAP SMDGLGSSCP ASHCRDLLPH PVLGRPPAPL GAPQGAVYTD BACU008083/1-79 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004278/1-335 CSGASPGKAP SMDGLGSSCP ASHCRDLLPH PVLGRPPAPL GAPQGAVYTD 101 150 ENSBTAP00000001222/1-309 IPAPEAARQC APPPAPPTSS SATLGYGYPF GGSYYGCRLS HNVNLQQKPC ENSP00000243056/1-330 IPAPEAARQC APPPAPPTSS SATLGYGYPF GGSYYGCRLS HNVNLQQKPC bmy_04696T0/1-330 IPAPEAARQC APPPAPPTSS SATLGYGYPF GGSYYGCRLS HNVNLQQKPC BACU008083/1-79 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004278/1-335 IPAPEAARQC APPPAPPTSS SATLGYGYPF GGSYYGCRLS HNVNLQQKPC 151 200 ENSBTAP00000001222/1-309 AYHPGDKYPE PSGALPGDDL SSRAKEFAFY PSFASSYQAM PGYLDVSVVP ENSP00000243056/1-330 AYHPGDKYPE PSGALPGDDL SSRAKEFAFY PSFASSYQAM PGYLDVSVVP bmy_04696T0/1-330 AYHPGDKYPE PSGALPGDDL SSRAKEFAFY PSFASSYQAM PGYLDVSVVP BACU008083/1-79 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004278/1-335 AYHPGDKYPE PSGALPGDDL SSRAKEFAFY PSFASSYQAM PGYLDVSVVP 201 250 ENSBTAP00000001222/1-309 GISGHPEPRH DALIPVEGYQ HWALSNGWDS QVYCSKEQSQ SAHLWKSPFP ENSP00000243056/1-330 GISGHPEPRH DALIPVEGYQ HWALSNGWDS QVYCSKEQSQ SAHLWKSPFP bmy_04696T0/1-330 GISGHPEPRH DALIPVEGYQ HWALSNGWDS QVYCSKEQSQ SAHLWKSPFP BACU008083/1-79 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004278/1-335 GISGHPEPRH DALIPVEGYQ HWALSNGWDS QVYCSKEQSQ SAHLWKSPFP 251 300 ENSBTAP00000001222/1-309 DVVPLQPEVN SYRRGRKKRV PYTKVQLKEL EKEYAASKFI TKEKRRRISA ENSP00000243056/1-330 DVVPLQPEVS SYRRGRKKRV PYTKVQLKEL EKEYAASKFI TKEKRRRISA bmy_04696T0/1-330 DVVPLQPEVN SYRRGRKKRV PYTKVQLKEL EKEYAASKFI TKEKRRRISA BACU008083/1-79 ------PEVN SYRRGRKKRV PYTKVQLKEL EKEYAASKFI TKEKRRRISA ENSTTRP00000004278/1-335 DVVPLQPEVN SYRRGRKKRV PYTKVQLKEL EKEYAASKFI TKEKRRRISA 301 350 ENSBTAP00000001222/1-309 TTNLSERQVT IWFQNRRVKE KKVVSKSKTP HLHST ENSP00000243056/1-330 TTNLSERQVT IWFQNRRVKE KKVVSKSKAP HLHST bmy_04696T0/1-330 TTNLSERQVT IWFQNRRVKE KKVVSKSKAP HLHST BACU008083/1-79 TTNLSERQVT IWFQNRRVKE KKVVSKSKAP HLHST ENSTTRP00000004278/1-335 TTNLSERQVT IWFQNRRVKE KKVVSKSKAP HLHST