KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:37 2014 Check: 00 .. Name: bmy_14820T0/1-371 Len: 795 Check: 9695 Weight: 1.00 Name: ENSP00000360727/1-730 Len: 795 Check: 2226 Weight: 1.00 Name: ENSTTRP00000002487/1-769 Len: 795 Check: 4714 Weight: 1.00 Name: ENSBTAP00000001237/1-701 Len: 795 Check: 9970 Weight: 1.00 // 1 50 bmy_14820T0/1-371 ---------- ---------- ---------- ---------- ---------- ENSP00000360727/1-730 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002487/1-769 RVQSGRAGVR GGRSSSAAEP EPLEAAPSRR GPGHGAIRAA QPPPLPLNSG ENSBTAP00000001237/1-701 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_14820T0/1-371 ---------- ---------- ---------- ---------- ---------- ENSP00000360727/1-730 ---------- MFSALKKLVG SDQAPGRDKN IPAGLQSMNQ ALQRRFAKGV ENSTTRP00000002487/1-769 AAGLGRGSGK MFSALKKLVG SEQAPGRDKN IPAGLQSMNQ ALQRRFAKGV ENSBTAP00000001237/1-701 ---------- MFSALKKLVG SEQAPGRDRN IPAGLQSMNQ ALQRRFAKGV 101 150 bmy_14820T0/1-371 ---------- ---------- ---------- ---------- ---------- ENSP00000360727/1-730 QYNMKIVIRG DRNTGKTALW HRLQGRPFVE EYIPTQEIQV TSIHWSYKTT ENSTTRP00000002487/1-769 QYNMKIVIRG DRNTGKTALW HRLQGKKFVE EYIPTQEIQV TSIHWSYKTT ENSBTAP00000001237/1-701 QYNMKIVIRG DRNTGKTALW HRLQGKKFVE EYIPTQEIQV TSIHWSYKTT 151 200 bmy_14820T0/1-371 ---------- ---------- -----MENDP QEAESEMALD AEFLDVYKNC ENSP00000360727/1-730 DDIVKVEVWD VVDKGKCKKR GDGLKMENDP QEAESEMALD AEFLDVYKNC ENSTTRP00000002487/1-769 DDIVKVEVWD VVDKGKCKKR GDALKMENEP QEAESEMALD AEFLDVYKNC ENSBTAP00000001237/1-701 DDVVKVEVWD VVDKGKCKKR GDGLKMENDP QEAESEMALD AEFLDVYKNC 201 250 bmy_14820T0/1-371 NGVVMMFDIT KQWTFNYILR ELPKVPTHVP VCVLGNYRDM GEHRVILPDD ENSP00000360727/1-730 NGVVMMFDIT KQWTFNYILR ELPKVPTHVP VCVLGNYRDM GEHRVILPDD ENSTTRP00000002487/1-769 NGVVMMFDIT KQWTFNYILR ELPKVPTHVP VCVLGNYRDM GEHRVILPDD ENSBTAP00000001237/1-701 NGVVMMFDIT KQWTFNYILR ELPKVPTHVP VCVLGNYRDM GEHRVILPDD 251 300 bmy_14820T0/1-371 VRDFIDNLD- RPPGSSYFRY AESSMKNSFG LKYLHRFFNI PFLQLQRETL ENSP00000360727/1-730 VRDFIDNLDS RPPGSSYFRY AESSMKNSFG LKYLHKFFNI PFLQLQRETL ENSTTRP00000002487/1-769 ARDFIDNLD- RPPGSSYFRY AESSMKNSFG LKYLHRFFNI PFLQLQRETL ENSBTAP00000001237/1-701 VRDVLDHLD- RPPGSSYFRY AESSMKNSFG LKYLHRFFNI PFLQLQRETL 301 350 bmy_14820T0/1-371 LRQLETNQLD IDATLEELSV QQETEDQNYD IFLEMMEARS RGHASPLATN ENSP00000360727/1-730 LRQLETNQLD MDATLEELSV QQETEDQNYG IFLEMMEARS RGHASPLAAN ENSTTRP00000002487/1-769 LRQLETNQLD IDATLEELSV QQETEDQNYD IFLEMMEARS RGHASPLATN ENSBTAP00000001237/1-701 LRQLETNQLD IDATLEELSV QQETEDQNYD IFLEMMEARS RGHASPLTTS 351 400 bmy_14820T0/1-371 GQSPSSGSPS PVVPLSAVPT GSSSPSTPQP APQPPLQAPS ACPGPPS-PS ENSP00000360727/1-730 GQSPSPGSQS PVVPAGAVST GSSSPGTPQP APQLPLNAAP PSSVPPVPPS ENSTTRP00000002487/1-769 GQSPSSGSPS PVVPLSAVST GSSSPSTPQP APQPPLQAPS ACPGPPC-PS ENSBTAP00000001237/1-701 GQSPSSGSQS PVVPPSTVST GSSSPSTPQP VLQPPLQAP- --PAPPA-PA 401 450 bmy_14820T0/1-371 EAPPAPAHPL VPAAPPRRSI ISRLFGTSPA AEVTPSPP-- ---------- ENSP00000360727/1-730 EALPPPACPS APA--PRRSI ISRLFGTSPA TEAAPPPPEP VPAAEGPATV ENSTTRP00000002487/1-769 EAPPAPAHPL VPAAPPRRSI ISRLFGTSPA AEVVLSPPEP APASEAPARV ENSBTAP00000001237/1-701 EAPPLPAAP- -----PRRSI IARLFGSTPA TEAAPPPPEP TPAAEASQKV 451 500 bmy_14820T0/1-371 ---------- ---------- ---------- ---------- ---------- ENSP00000360727/1-730 QSVEDFVPDD RLDRSFLEDT TPARDEKKVG AKAAQQDSDS DGEALGGNPM ENSTTRP00000002487/1-769 QNVEDFVPDD SLDRSFLEDV APPRDEKKVG AKVP-QDSDS DGEAPGGNPM ENSBTAP00000001237/1-701 QNVEDFVPED SLDGSFLEDT VPAKDEKRLG ARGP-QDSDS DRETQAGNPM 501 550 bmy_14820T0/1-371 ---------- -GRPQEQPSG GGHRHPKRGV ALS------- --PWPREPLP ENSP00000360727/1-730 VAGFQDDVDL EDQPRGSPPL PAGPVPSQDI TLSSEEEAEV AAPT-KGPAP ENSTTRP00000002487/1-769 VAGFQDDVDL EDKPPSRPLP PTGPIPREHI TLSSEEE-EV AAGH-RGPVL ENSBTAP00000001237/1-701 VAGFQDDVDL EDKPPSRPLP PTGPVPSEDI TLSSEEEAEE GAGHPKAAVL 551 600 bmy_14820T0/1-371 TRMGSP---- --FFLRGRQP HSLATRHPAC GPAWRG---- ---------- ENSP00000360727/1-730 APQQCSEPET KWSSIPASKP RRGTAPTRTA APPWPGGVSV RTGPEKRSST ENSTTRP00000002487/1-769 APQKCSEPGT KRSSTKASRP HQDAAP-KAT EPHWPG---- ---------H ENSBTAP00000001237/1-701 APQKCPEPET RRSSTKALGP PRDAAP-RAA KPRPEG---- ---------- 601 650 bmy_14820T0/1-371 -------PG- ---------- ---------- ---------- --------WA ENSP00000360727/1-730 RPPAEMEPGK GEQASSSESD PEGPIAAQML SFVMDDPDFE SEGSDTQRRA ENSTTRP00000002487/1-769 GSSPGLEDG- GDKQVSSESD PEGPIAAQML SFVMDDPDFE SD-SDAQRRA ENSBTAP00000001237/1-701 -PSGKLEEG- TDKPVSSESD AEGPIAAQML SFVMDDPDFE SD-SDAQRRA 651 700 bmy_14820T0/1-371 GRWA------ -----RVGAC CPQSRPQLQR PRQESRTWRT LF-------- ENSP00000360727/1-730 DDFPVRDDPS DVTDEDEGPA EPPPPPKLPL PAFRLKNDSD LFGLGLEEAG ENSTTRP00000002487/1-769 GEFPVREDLS DVTDEEAGPV QPPPPPKPPA PSFRLKNDSD LFGLGLENTG ENSBTAP00000001237/1-701 GEFPVREDLS DLTDEDAGPV QPPAPPKPLA PSFRLKDDSD LFGLGLEEPG 701 750 bmy_14820T0/1-371 ---------- ---------- ---------- ---------- ---------- ENSP00000360727/1-730 PKESSEEGKE GKTPSKEKKK KKKKGKEEEE KAAKKKSKHK KSKDK--EEG ENSTTRP00000002487/1-769 RKESSEEDKE GRPPSKEKKK KKKKGREEEE KAAKKKSRRK KSRDQAEDKG ENSBTAP00000001237/1-701 REDSSEQDKE GRPPAKEKKK KKKKGREEED KAAKKRSKHK KSRERADDKG 751 800 bmy_14820T0/1-371 ---------- ---------- --LTTVLTAA SWRTQPP--- ----- ENSP00000360727/1-730 KEERRRRQQR PPRSRERTAA DELEAFLGGG APGGRHPGGG DYEEL ENSTTRP00000002487/1-769 REERRRR--- --RGTERPAV DELEAFLGGG APGGHLRGGG DYEEL ENSBTAP00000001237/1-701 RDERRRR--- -PRGPQRTAL DELEAFLGGG APSGPLRGGG DYEAL