KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:40 2014 Check: 00 .. Name: ENSTTRP00000015376/1-462 Len: 535 Check: 1881 Weight: 1.00 Name: ENSBTAP00000001250/1-489 Len: 535 Check: 5413 Weight: 1.00 Name: ENSP00000283415/1-534 Len: 535 Check: 3786 Weight: 1.00 Name: bmy_05119T0/1-486 Len: 535 Check: 699 Weight: 1.00 Name: BACU020420/1-451 Len: 535 Check: 8849 Weight: 1.00 // 1 50 ENSTTRP00000015376/1-462 ---------- ---------- ---------- ---------- -----VAVMT ENSBTAP00000001250/1-489 ---------- ---------- ---------- ---------- -----VAVMT ENSP00000283415/1-534 MRLRGCGPRA APASSAGASD ARLLAPPGRN PFVHELRLSA LQKAQVALMT bmy_05119T0/1-486 ---------- ---------- ---------- ---------- --------MT BACU020420/1-451 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000015376/1-462 LTLFPIRLLV ATVMMLLAWP LALVASLGSA EQEPEQPLAL WRXXXXXXXX ENSBTAP00000001250/1-489 LTLFPVRLLV VVLMMLLAWP LALVSSLGPA GREPEQPPAL WRRVVDVLLR ENSP00000283415/1-534 LTLFPVRLLV AAAMMLLAWP LALVASLGSA EKEPEQPPAL WRKVVDFLLK bmy_05119T0/1-486 LTLFPIRLLV AAVMMLLAWP LALVASLGSA EREPEQPLAL WRRVVDVLLK BACU020420/1-451 ---FPIRLLV AAVMMLLAWP LALVASLGSA DREPEQPLAL WRRVVDVLLK 101 150 ENSTTRP00000015376/1-462 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX X-XXXXXXXX ENSBTAP00000001250/1-489 AIMRTMWLAG GFHHVAVKGR RAPPTEAAIL TLAPHSSYFD AVVPPNVPIS ENSP00000283415/1-534 AIMRTMWFAG GFHRVAVKGR QALPTEAAIL TLAPHSSYFD A-IPVTMTMS bmy_05119T0/1-486 AIMRTMWFAG GFHRVAVKGR QALPTEATIL TLAPHSSYFD A-IPVTMTMS BACU020420/1-451 ATMRTMWFAG GFHRVAVKGR RALPTEAAIL TLAPHSSYFD A-IPVTMTMS 151 200 ENSTTRP00000015376/1-462 XXXXXXXXXX XXXXXXLIKY IRPVFVSRMD QDSRRKTVEV IKRRAQSSGK ENSBTAP00000001250/1-489 SWSFLVASGI IREEGALIKY IRPVFVSRTD QDSRRKTVEE IKRRAQSGGK ENSP00000283415/1-534 SIVMKAESRD IPIWGTLIQY IRPVFVSRSD QDSRRKTVEE IKRRAQSNGK bmy_05119T0/1-486 SIVMKAESRD IPIWGTLIKY IRPVFVSRMD QDSRRKTVEV IKRRAQSSGK BACU020420/1-451 SIVMKAESRD IPIWGTLIKY IRPVFVSRMD KDSRRKTVEV IRRRAQSSGK 201 250 ENSTTRP00000015376/1-462 WPQIMIFPEG TCTNRTCLIT FKPGAFIPGV PVQPVVLRYP NKLDTITWTW ENSBTAP00000001250/1-489 WPQIMIFPEG TCTNRTCLIT FKPGAFIPGV PVQPVVLRYP NKLDTITWTW ENSP00000283415/1-534 WPQIMIFPEG TCTNRTCLIT FKPGAFIPGA PVQPVVLRYP NKLDTITWTW bmy_05119T0/1-486 WPQIMIFPEG TCTNRTCLIT FKPGAFIPGV PVQPVVLRYP NKLDTITWTW BACU020420/1-451 WPQIMIFPEG TCTNRTCLIT FKPGAFIPGV PVQPVVLRYP NKLDTITWTW 251 300 ENSTTRP00000015376/1-462 QGPGALKILW LTLCQFHNQV EIEFLPVYTP SEEEKQDPAL YASNVRHVMA ENSBTAP00000001250/1-489 QGPGALKILW LTLCQFHSQV EIEFLPVYTP SEEEKRDPAL YASNVRRVMA ENSP00000283415/1-534 QGPGALEILW LTLCQFHNQV EIEFLPVYSP SEEEKRNPAL YASNVRRVMA bmy_05119T0/1-486 QGPGALKILW LTLCQFHNQV EIEFLPVYTP SEEEKEDPTL YASNVRHVMA BACU020420/1-451 QGPGALKILW LTLCQFHNQV EIEFLPVYTP SEEEKKDPTL YASNVRHVMA 301 350 ENSTTRP00000015376/1-462 EALGVSVTDY TFEDCQLALA EGQLRLPADT CLLEFARLVR GLGLKPEKLE ENSBTAP00000001250/1-489 EALGVAVTDY TFEDCQLALA EGQLRLPADT CLLEFARLLR GLGLKPEKLE ENSP00000283415/1-534 EALGVSVTDY TFEDCQLALA EGQLRLPADT CLLEFARLVR GLGLKPEKLE bmy_05119T0/1-486 EALGVSVTDY TFEDCQLALA EGQLRLPADT CLLEFARLVR GLGLKPEKLE BACU020420/1-451 EALGVSVTDY TFEDCQLALA EGQLRLPADT CLLEFARLVR GLGLKPEKLE 351 400 ENSTTRP00000015376/1-462 RDLDRHAESA RMKQGE-LDA AKFAAQLEVP ESRALEDLFA LFDEKGGGEM ENSBTAP00000001250/1-489 QDLDRHAESA RMTQGRRVTL PEFAAQLGVP ESESLEDLFS LFDEGGGGEV ENSP00000283415/1-534 KDLDRYSERA RMKGGEKIGI AEFAASLEVP VSDLLEDMFS LFDESGSGEV bmy_05119T0/1-486 RDLDRHAESA RMKRGGSLTL PKFAAQLEVP ESEALEDLFA LFDERGGGEM BACU020420/1-451 RDLDRHAESA RMKRGGSLTL PKFAAQLEVP ESEALEDLFA LFDERGGGEM 401 450 ENSTTRP00000015376/1-462 DMREYVVALS VVCRPSQTLD TIRLAFKMYG SQEDGSIDEH ALSSILKTAL ENSBTAP00000001250/1-489 DLREYVVALS VVCRPARTLD TIQLAFKMFG SQ-DGSVEEH ALSSILKTAL ENSP00000283415/1-534 DLRECVVALS VVCRPARTLD TIQLAFKMYG AQEDGSVGEG DLSCILKTAL bmy_05119T0/1-486 DMREYVVALS VVCRPSQTLD TIQLAFKMYG SQEDGSIDEH ALSSILKTAL BACU020420/1-451 DMREYVVALS VVCRPSQTLD TIQLAFKMYG SQEDGSIDEH ALSSILKTAL 451 500 ENSTTRP00000015376/1-462 GVAELTVTDL FRAIDQEEKG RITFGDFERF AEAYSDFADE YLYPKQTHSQ ENSBTAP00000001250/1-489 GVAELTVTDL FRAIDQERKG RIAFADFKRF AEANPDFAEE YLYPEQTRPR ENSP00000283415/1-534 GVAELTVTDL FRAIDQEEKG KITFADFHRF AEMYPAFAEE YLYPDQTHFE bmy_05119T0/1-486 GVAELTVTDL FRAIDQEKKG RITFADFERF AEAYPDFAEE YLYPEQTRSQ BACU020420/1-451 GVAELTVTDL FRAIDREEKG RITFADFERF AEAYPDFAEE YLYPKQTCSQ 501 550 ENSTTRP00000015376/1-462 SCAET----- ---------- ---------- -RHLR ENSBTAP00000001250/1-489 SCARTPPAPT PNGFCADFSP ENSATGTEPV RKKLD ENSP00000283415/1-534 SCAETSPAPI PNGFCADFSP ENSDAGRKPV RKKLD bmy_05119T0/1-486 SCAQTPPAPT PNGFCADFSP ENLAAGTEAF RKKLD BACU020420/1-451 SCAQT----- ---------- ---------- -----