KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:40 2014 Check: 00 .. Name: ENSP00000343635/1-456 Len: 456 Check: 7573 Weight: 1.00 Name: ENSBTAP00000001252/1-456 Len: 456 Check: 9633 Weight: 1.00 Name: bmy_22608T0/1-404 Len: 456 Check: 8041 Weight: 1.00 Name: ENSTTRP00000011696/1-403 Len: 456 Check: 889 Weight: 1.00 // 1 50 ENSP00000343635/1-456 MGNSRSRVGR SFCSQFLPEE QAEIDQLFDA LSSDKNSPNV SSKSFSLKAL ENSBTAP00000001252/1-456 MGNNKSCPGQ ECSSRFLPAE QAEVNRLFDA LSSEKLGSSA SPRSFSLQAL bmy_22608T0/1-404 ---------- -CFSIILPHL TGTLSDLFTY LS-------- ---------L ENSTTRP00000011696/1-403 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000343635/1-456 QNHVGEALPP EMVTRLYDGM RRVDLTGKAK GPSENVSQEQ FTASMSHLLK ENSBTAP00000001252/1-456 KGHVGDALPP EMVTRLFEGM RRVDGSGKAK GPSERVSQEQ FTASMSHLLK bmy_22608T0/1-404 QSHVGEALPA EMVTRLFEGM RRVDVTGNTK GPSERISQEQ FTVSMSHLLK ENSTTRP00000011696/1-403 -SHVGEALPQ EMVTRLFEGM RRVDVTGKTK GPSERISQEQ FTVSMSYLLK 101 150 ENSP00000343635/1-456 GNSEEKSLMI MKMISATEGP VKAREVQKFT EDLVGSVVHV LSHRQELRGW ENSBTAP00000001252/1-456 GTAEEKSLVI LNMISASGGP VKARDVHKFT EDLVGSVVHV LSYRRQLRGW bmy_22608T0/1-404 GNAEEKSLVI LKMISATEGP VKAREVQKFT EDLVGSVAHV LNYRQELRGW ENSTTRP00000011696/1-403 GNAEEKSLVI LKMISATEGP VKAREVKKFT EDLVGSVAHV LNYRQELRGW 151 200 ENSP00000343635/1-456 TGKEAPGPNP RVQVLAAQLL SDMKLQDGKR LLGPQWLDYD CDRAVIEDWV ENSBTAP00000001252/1-456 SQKPPPGSPS RVQVLAAQLC SEMRLQGGGK LLGPQWLDRD CDQAVLEDWV bmy_22608T0/1-404 TQKQAPGSLS RVQRL----- ---------- ---------D CDRTTVEDWV ENSTTRP00000011696/1-403 TQKQGPGSLS RVQVLAAQLC SEMKLQGGEK PLGPQRL--E CDRTTIEDWV 201 250 ENSP00000343635/1-456 FRVPHVAIFL SVVICKGFLI LCSSLDLTTL VPERQVDQGR GFESILDVLS ENSBTAP00000001252/1-456 FRAHHVATFL SLVIHQGFLL LRSSLKLATL VPERQVDPQR EFASVLDVLS bmy_22608T0/1-404 FRAPHVATFL SVVIQQGFLL LCSSLDLATL VPERQVDQER EFASVLDVLS ENSTTRP00000011696/1-403 FRAPHVATFL SVVIHQGFLL LGSSLDLATL VPKRQVDQGR EFASVLDVLS 251 300 ENSP00000343635/1-456 VMYINAQLPR EQRHRWCLLF SSELHGHSFS QLCGHITHRG PCVAVLEDHD ENSBTAP00000001252/1-456 VIYVNSHLPQ ERRLSWRLLF ATELHGNSFA QLCGRIAHGG PCLVLLEDSD bmy_22608T0/1-404 VIYINSHLPR EQRHPWRLLF SSELHGHSFA QLCGRIAHWG PCVVLLEDRD ENSTTRP00000011696/1-403 VIYINSHLPR EQRNHWRLLF SSELHGHSFA QLCGRITHCG PCVVLLEDHD 301 350 ENSP00000343635/1-456 KHVFGGFASC SWEVKPQFQG DNRCFLFSIC PSMAVYTHTG YNDHYMYLNH ENSBTAP00000001252/1-456 GHVFGGFASC SWEVKPQFQG DDRCFLFSVS PRMAVYTCTG YNDHYMYLNQ bmy_22608T0/1-404 GHVFGGFASC SWEVKPQFQG DERCFLFSIS PRMAVYTCTG YNDHYMYLNQ ENSTTRP00000011696/1-403 GHVFGGFASC SWEVKPQFQG DDRCFLFSIS PSMAVYTSTG YNDHYMYLNQ 351 400 ENSP00000343635/1-456 GQQTIPNGLG MGGQHNYFGL WVDVDFGKGH SRAKPTCTTY NSPQLSAQEN ENSBTAP00000001252/1-456 GQQTIPNGLG MGGQHGYFGL WIDVDFGKGH SKAKPTCTTY GSPQLSAQED bmy_22608T0/1-404 GQQTIPNGLG MGGQHDYFGL WIDVDFGKGH SKAKPTCTTY NSPQLSAQED ENSTTRP00000011696/1-403 GQQTIPNGLG MGGQHNYFGL WIDVDFGKGH SKAKPTCTTY NSPQLSAQED 401 450 ENSP00000343635/1-456 FQFDKMEVWA VGDPSEEQLA KGNKSILDAD PEAQALLEIS GHSRHSEGLR ENSBTAP00000001252/1-456 FQFQKMEVWA VGEAPKAESV RKTRSILDID PEARALLEAS GRGRHSEGLR bmy_22608T0/1-404 FRFEKMEVWA VGDASVTQLA KNTKSVLDVD PAARALLEVS GRIRHSEGLR ENSTTRP00000011696/1-403 FRFEKMEVWA VGDASVTQLA KNTKSVLDVD PTAQALLEVS GRMRHSEGLR 451 500 ENSP00000343635/1-456 EVPDDE ENSBTAP00000001252/1-456 EVPDEP bmy_22608T0/1-404 EVPDDQ ENSTTRP00000011696/1-403 EVPEDQ