KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:42 2014 Check: 00 .. Name: ENSP00000255152/1-696 Len: 708 Check: 3819 Weight: 1.00 Name: ENSBTAP00000001267/1-690 Len: 708 Check: 7362 Weight: 1.00 Name: bmy_06259T0/1-665 Len: 708 Check: 4131 Weight: 1.00 Name: ENSTTRP00000015160/1-692 Len: 708 Check: 2994 Weight: 1.00 Name: BACU011377/1-692 Len: 708 Check: 3105 Weight: 1.00 // 1 50 ENSP00000255152/1-696 MELGSCFKTY EDFKECFSAY KRENR----- ----CSFILR DCVSVRFHNL ENSBTAP00000001267/1-690 ---------- -NKTRWWGQW KTGRRSGGGC PAVTACWPCR TTGPLPEPGM bmy_06259T0/1-665 ---------- MNMKGVLVGW GLEER----- ----PEY--- ---------- ENSTTRP00000015160/1-692 MELGSCFKTY EDFKECFSAY KKENR----- ----CSFILR DCVSVRFHNL BACU011377/1-692 MELGSCFKTY EDFKECFSAY KKENR----- ----CSFILR DCVSVRFHNL 51 100 ENSP00000255152/1-696 NHGTSIREDI LYVQVKFVCI RTQSNRKRTR EADMCPAYLL LRYNERLDRL ENSBTAP00000001267/1-690 TWPPGCCAHN RYVQVKFVCI RTQSNRKRAA EADMCPAYLL LRYNEKLDRL bmy_06259T0/1-665 -FGTG---EK TYVQVKFVCI RTQSNRKRTA AAAMCPAYLL LRYNEKLDRL ENSTTRP00000015160/1-692 NHGTSIREDI LYVQVKFVCI RTQSNRKRTA AAAMCPAYLL LRYNEKLDRL BACU011377/1-692 NHGTSIREDI LYVQVKFVCI RTQSNRKRTA AAAMCPAYLL LRYNEKLDRL 101 150 ENSP00000255152/1-696 FISELNTQHI HGDSKVASPG GDTTGKSQKT MCLQRLQPVQ PTTKKDLDTA ENSBTAP00000001267/1-690 FISELNTQHI HIDPKTTGPR GDATGKSQK- ----KLLSAQ PAVNKDLGTA bmy_06259T0/1-665 FISELNTQHI HVDSKTTGPR GDATGKSQK- ----KLQPAQ PTINKDLGTA ENSTTRP00000015160/1-692 FISELNTQHI HVDSKTAGPR GDATGKSQK- ----KLQPAQ PTINKDLGTA BACU011377/1-692 FISELNTQHI HVDSKTAGPR GDATGKSQK- ----KLQPAQ PTINKDLGTA 151 200 ENSP00000255152/1-696 EKSLVEPSFC LDKVQVSSKP EQEGITPSDL AKIAKVMKNF LKVDEGSMAS ENSBTAP00000001267/1-690 AKSPVEPLFC LDEVQIPAKP EQEDIAPSDL AKIAKVMKNF LKVDVGSMAS bmy_06259T0/1-665 EKSLVEPSFC LDKVQTPSKP EQEGITPSDL AKIAKVMKNF LKVDVGSMAS ENSTTRP00000015160/1-692 EKSLFEPSFC LDKVQTPSKP EQEGITPSDL AKIAKVMKNF LKVDVGSMAS BACU011377/1-692 EKSLVEPSFC LDKVQTPSKP EQEGITPSDL AKIAKVMKNF LKVDVGSMAS 201 250 ENSP00000255152/1-696 FSVGDSQHLD RLSFQSSKMT DLFIRFPENL LLHRVENTQG HILYAFLVEN ENSBTAP00000001267/1-690 FSVGSSQDLD RLSFQSSKMS DLFVRFPENL LLHRVENAQG HILYAFLVES bmy_06259T0/1-665 FSVGSSQDLD RLSFQSSKMS DLFIRFPENL LLHRVENAQG HILYAFFVES ENSTTRP00000015160/1-692 FSVGSSQDLD RLSFQSSKMS DLFIRFPENL LLHRVENAQG HILYAFLVES BACU011377/1-692 FSVGSSQDLD RLSFQSSKMS DLFIRFPENL LLHRVENAQG HILYAFLVES 251 300 ENSP00000255152/1-696 KERESRVVHF AVLKAETVTS VAKMLSIFTE FNSDWPKVKV VFVDPSFHYR ENSBTAP00000001267/1-690 KEREGRVVHF AVLKAETATS VAKMLSIFTE FNSDWPKVKV VFVDPSFPHR bmy_06259T0/1-665 KEREGRVVHF AVLKAETATS VAKMLSIFTE FNSDWPKVKV VFVDPSFSHR ENSTTRP00000015160/1-692 KEREGRVVHF AVLKSETATS VAKMLSIFTE FNSDWPKVKV VFVDPSFPHR BACU011377/1-692 KEREGRVVHF AVLKAETATS VAKMLSIFTE FNSDWPKVKV VFVDPSFPHR 301 350 ENSP00000255152/1-696 AILQEIFPAA RILLSIYHTT RLLEKKLHRS SANPSFKRLM KEALREAVFV ENSBTAP00000001267/1-690 AILQEVFPGA RTLLSVYHTT RLLEKKLHRS SADPSFKRLM KEALREAVFV bmy_06259T0/1-665 AILQEIFPAA RILLSIYHTT RLLEKKLHRS SADPSFKRLM KEALREAVFV ENSTTRP00000015160/1-692 AILQEIFPAA RILLSIYHTT RLLEKKLHRS SADPSFKRLM KEALREAVFV BACU011377/1-692 AILQEIFPTA RILLSIYHTT RLLEKKLHRS SADPSFKRLM KEALREAVFV 351 400 ENSP00000255152/1-696 TSEASLKNLC QMSQAVLDED LFNFLQAHWF TCELLWYMHV RKGLLACNTY ENSBTAP00000001267/1-690 TSETSLQNLC QMSRTLLDEQ LFSFLQAHWF SCELLWYMHV RKGLHACSTY bmy_06259T0/1-665 TSEASLQNLC QMSQALLDER LFSFLQAHWF SCELLWYMHV RKGLHACNTY ENSTTRP00000015160/1-692 TSEASLQNLC QMSQVLLNEQ LFSFFQAHWF SCELLWYMHV RKGLHACNTY BACU011377/1-692 TSEASLQNLF QMSQALLDER LFSFLQAHWF SCELLWYMHV RKGLHACSTY 401 450 ENSP00000255152/1-696 MDSLDIVTSK VSSLFREQQS LLDCILCFVD YIDFFNTKGL KNLPTPPPKL ENSBTAP00000001267/1-690 MDSLDVVTSK VSSLFREQQS LLDCILHFVD YIDFFNTKGV KNFPTAPPKL bmy_06259T0/1-665 MDSLDVVTSK VSSLFREQQS LLDCILRFVD YIDFFNTKGL KNLPTAPPRL ENSTTRP00000015160/1-692 MDSLDVVTSK VSSLFREQQS VLDCILRFVD YIDFFNTKGL KNFPTAPPRL BACU011377/1-692 MDSLDVVTSK VSSLFREQQS LLDCILRFVD YIDFFNTKGL KNLPTAPPRL 451 500 ENSP00000255152/1-696 KRARPASMPL KSKKAFGICG ESLTSLPAEE TKPDAQQVQV QQQ--SQVPP ENSBTAP00000001267/1-690 KRARSANTAP KSKKPSGICG GSLSRPPVQE AKPE--QVRG PPRQPPQGQP bmy_06259T0/1-665 KRARAASMAP KSKKASGICG GSLSRLPVQE AQPEPQQVQA PPQQ-PQGQP ENSTTRP00000015160/1-692 KRARSASKAP KSKKASGICG GSFIRLPMQE AQPELQQVRA PQQQ-PQGQP BACU011377/1-692 KRARAASMAP KSKKASGICG GSLSRLPVQE AQPEPQQVQA PRQQ-PQGQP 501 550 ENSP00000255152/1-696 SQVGMLDTLH QSGSELAYKL CHNEWEVVQN STHLVDMAGS SVDVQLLEDS ENSBTAP00000001267/1-690 LQGGMLASLR QSGSDLAYKL CHNEWVVVQS STHLVDVAGC AVDVQLLEDS bmy_06259T0/1-665 SQGGMLDSLL QSGSDLAYKL CHNEWAVVQN STHLVDVAGC SVDVQLLEDS ENSTTRP00000015160/1-692 SQGGMLDSLL QSGSDLAYKL CHNEWAVVQN STHLVDVAGC SVDVQLLEDS BACU011377/1-692 SQGGMLDSLL QSGSDLAYKL CHNEWAVVQN STHLVDAAGC SVDVQLLEDS 551 600 ENSP00000255152/1-696 HQVSKDGCSC SCSFQQWYHL PCRHILALLH TSQQPVGEAM VCRRWQKKYQ ENSBTAP00000001267/1-690 HQVSKDGCSC SCYFQQRYHL PCRHILALLH TSQRPVSEAM VCRRWQKRYQ bmy_06259T0/1-665 HQASKDGCSC SCSFQQRYHL PCRHILALLH TSQRPVGEAM VCRRWQKRYQ ENSTTRP00000015160/1-692 HQASKDGCSC SCSFQQRYHL PCRHILALLH TSQRPVGEAM VCRRWQKRYQ BACU011377/1-692 QQASKDGCSC SCSFQQRYHL PCRHILALLH TSQRPVGEAM VCRRWQKRYQ 601 650 ENSP00000255152/1-696 YLLGPNGELQ DRGMVP-NTG QPEKQGRNDM IQDLSRELAN LLMQTEGPEL ENSBTAP00000001267/1-690 HLLGPCGELR DPILIPADAG QPGEPGRNDM IQDLSRELAN LLMQSEGPEL bmy_06259T0/1-665 HLLGPSGELR DPVLMP-NAG QPGEKGRNDM IQDLSRELAN LLMQSEGPEL ENSTTRP00000015160/1-692 HLLGPSGELR DPVLIP-NAG QPGEKGRNDM IQDLSRELAN LLMQSEGPEL BACU011377/1-692 HLLGPSGELR DPVLMP-NAG QPGEKGRNDM IQDLSRELAN LLMQSEGPEL 651 700 ENSP00000255152/1-696 EERYSTLRKI VDIWAGPSQP SELFQQPGDF KDVGRLPFLW GKQEEGEGFP ENSBTAP00000001267/1-690 EERCSTLRKI VDIWAAPRQP PEPSHQPRDF RDVGCLPFLW GKQEEGEGLA bmy_06259T0/1-665 EERCSTLRKI VDIWAAPCQP PEPSQRPGDF KDVGRLPFLW GRQEEGEGLA ENSTTRP00000015160/1-692 EERCSTLRKI VDIWAASCQP PEPSQQLGDF KDVGRLPFLW GKQEEGEGLA BACU011377/1-692 EERCSTLRKI VDIWAAPCQP PEPSQRPGDF KDVGRLPFLW GKQEEGEGLA 701 750 ENSP00000255152/1-696 PATAVMHY ENSBTAP00000001267/1-690 PAGTTIHG bmy_06259T0/1-665 PPGATIHD ENSTTRP00000015160/1-692 PPGATIHD BACU011377/1-692 PPGATIHD