KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:43 2014 Check: 00 .. Name: ENSTTRP00000003908/1-935 Len: 936 Check: 458 Weight: 1.00 Name: BACU009956/1-218 Len: 936 Check: 4385 Weight: 1.00 Name: bmy_07457T0/1-445 Len: 936 Check: 339 Weight: 1.00 Name: ENSBTAP00000001278/1-835 Len: 936 Check: 5873 Weight: 1.00 // 1 50 ENSTTRP00000003908/1-935 MAATSALPGV SLREATQRRL RRFSELRGKP VAAGEFWDIV AITAADDKQE BACU009956/1-218 ---------- ---------- --MGNYKSRP TQT------- ---------- bmy_07457T0/1-445 ---------- ---------- ---MKFRGRA K--------- ---------- ENSBTAP00000001278/1-835 ---------- ---------- --MGNYKSRP TQT------- ---------- 51 100 ENSTTRP00000003908/1-935 LAYKQQLSEK LKKKELPLGV QYHVFVDPAG AKIGNGGSTL CALRCLEKLY BACU009956/1-218 ---------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001278/1-835 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000003908/1-935 GDEWNSFTIL LIHSDEWKKK VSESYVIVIE RLEDDLRIKE KELTELRHIF BACU009956/1-218 ---------- --CTDEWKKK VSESYVIVIE RLEDDLRIKE KELTELRHIF bmy_07457T0/1-445 ---------- ------WD-- ---------- ---------- -QVNELK--- ENSBTAP00000001278/1-835 ---------- --CTDEWKKK VSESYVIVIE RLEDDLQIKE KELTELRHIF 151 200 ENSTTRP00000003908/1-935 GSDDAFSKVN LNYRTENGLS LLHLCCICGG NKSHIRTLML KGLRPSRLTR BACU009956/1-218 GSDDAFSKVN LNYRTENGLS LLHLCCICGG NKSHIRTLML KGLRPSRLTR bmy_07457T0/1-445 ----SYCRRN IQ-------- ---------- QTRTMRTFVL ---------- ENSBTAP00000001278/1-835 GSDDAFSKVN LNYRTENGLS LLHLCCICGG NKSHIRTLML KGLRPSRLTR 201 250 ENSTTRP00000003908/1-935 NGFTALHLAV YKDSAELITS LLHSGADIQQ VGYGGLTALH IATIAGHLEA BACU009956/1-218 NGFTALHLAV YKDSAELITS LLHSGADIQQ VGYGGLTALH IATIA----- bmy_07457T0/1-445 ---------- ---------- ---------- ---------- ---------A ENSBTAP00000001278/1-835 NGFTALHLAV YKDSAELITS LLHSGADIQQ VGYGGLTALH IATIAGHLEA 251 300 ENSTTRP00000003908/1-935 ADVLLQHGAN INVQDAVFFT PLHIAAYYGH EQVTRLLLKF GADVNVSGEV BACU009956/1-218 ---------- ---------- --------GH LEVSHIL--- -------ATC bmy_07457T0/1-445 ADVLLQHGAN INVQDAVFFT PLHIAAYYGH EQVTRLLLKF GADVNVSGEV ENSBTAP00000001278/1-835 ADVLLQHGAN VNVQDAVFFT PLHIAAYYGH EQVTRLLLKF GADVNVSGEV 301 350 ENSTTRP00000003908/1-935 GDRPLHLASA KGFFNIAKLL VEEGNKADVN AQDNEDHVPL HFCSRFGHHD BACU009956/1-218 ENKPTSLDS- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 GDRPLHLASA KGFFNIAKLL VEEGNKADVN AQDNEDHVPL HFCSRFGHHD ENSBTAP00000001278/1-835 GDRPLHLASA KGFFNIAKLL VEEGSKADVN AQDNEDHVPL HFCSRFGHHN 351 400 ENSTTRP00000003908/1-935 IVKYLLQSNL EVQPHVVNIY GDTPLHLACY NGKFEVAKEI IQISRIESLT BACU009956/1-218 ---------- ---------- --------CF Q---MVAFEI LGVGLI--LT bmy_07457T0/1-445 IVKYLLQSNL EVQPHVVNIY GDTPLHLACY NGKFEVAKEI IQISGIESLT ENSBTAP00000001278/1-835 IVKYLLQSDL EVQPHVVNIY GDTPLHLACY NGKFEVAKEI IQISGVESLT 401 450 ENSTTRP00000003908/1-935 KENIFSETA- HSACTYGKSI DLVKFLLDQN VISINHQGRD GHTGLHSACY BACU009956/1-218 NE-------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 KENIFSETAF H--------- ---------- --SINHQGRD GHTGLHSACY ENSBTAP00000001278/1-835 KENIFSETAF HSACTYGKSI DLVKFLLDQN VISINHQGRD GHTGLHSACY 451 500 ENSTTRP00000003908/1-935 HGHIHLVQFL LDNGADMNLV ACDPSRSSGE KDEQTCLMWA YEKGHDAIVT BACU009956/1-218 HTHISF---- ---GVQIKL- ---------- ---------- ---------- bmy_07457T0/1-445 HGHIHLVQFL LDNGADMNLV ACDPSRSSGE KDEQTCLMWA YEKGHDAIVT ENSBTAP00000001278/1-835 HGHIRLVQFL LDNGADMNLV ACDPSRSSGE KDEQTCLMWA YEKGHDAIVT 501 550 ENSTTRP00000003908/1-935 LLKHYKRPQD ELPCNEYSQP GGDGSYVSVP SPLGKIKSMT KXXXXXXXXX BACU009956/1-218 ---------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 LLKHYKRPQD ELPCNEYSQP GGDGSYVSVP SPLGKIKSMT KEKADVLLLR ENSBTAP00000001278/1-835 LLKHYKRPQD ELPCNEYSQP GGDGSYVSVP SPLGKIKSMT KEKADVLLLR 551 600 ENSTTRP00000003908/1-935 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU009956/1-218 ---------- ---------- ---------- --CK------ -------YSF bmy_07457T0/1-445 AGLPSHFHLQ LSEIEFHEII GSGSFGKVYK GRCRNKIVAI KRYRANTYCS ENSBTAP00000001278/1-835 AGLPSHFHLQ LSEIEFHEII GSGSFGKVYK GRCRNKIVAI KRYRANTYCS 601 650 ENSTTRP00000003908/1-935 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU009956/1-218 DSKFGLFCNS V--------- ---------- ---------- ---------- bmy_07457T0/1-445 KSDVDMFCRE VSILCRLNHP CVIQFVGACL NDPSQFAIVT QYISGGSLFS ENSBTAP00000001278/1-835 KSDVDMFCRE VSILCRLNHP CIIQFVGACL NDPSQFAIVT QYISGGSLFS 651 700 ENSTTRP00000003908/1-935 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXHNILLYED BACU009956/1-218 ---------- IKHQLI---- ---------- ---------- ---------- bmy_07457T0/1-445 LLHEQKRILD LQSKLIIAVD VAK------- ---------- ---------- ENSBTAP00000001278/1-835 LLHEQKRILD LQSKLIIAVD VAKGMEYLHN LTQPIIHRDL NSHNILLYED 701 750 ENSTTRP00000003908/1-935 GHAVVADFGE SRFLQSLDED NMTKQPGXXX XXXXXXXXXX XXXXXXXXXX BACU009956/1-218 ---------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001278/1-835 GHAVVADFGE SRFLQSLDED NMTKQPGNLR WMAPEVFTQC TRYTIKADVF 751 800 ENSTTRP00000003908/1-935 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU009956/1-218 ---------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001278/1-835 SYALCLWELL TGEIPFAHLK PAAAAADMAY HHIRPPIGYS IPKPIASLLM 801 850 ENSTTRP00000003908/1-935 XXXXXXXXGR PEFSEVVTKL EECLCNTELM SPASSNSSGS LSPSSSSDCL BACU009956/1-218 ---------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001278/1-835 RGWNACPEGR PEFSEVVTKL EECLCNIELM SPASSNSSGS LSPSSSSDCL 851 900 ENSTTRP00000003908/1-935 LSRGGPGRSH VAALRSRFEL EYALNARSYA AWSQSAGQCA SQGLSLEDMK BACU009956/1-218 ---------- ---------- ---------- ---------- ---------- bmy_07457T0/1-445 ---------- VTMFRKQI-- ---------- ---------- ---------- ENSBTAP00000001278/1-835 VNRGGPGRSH VAALRSRFEL EYALNARSYA AWSQSAGQCS TQGLSLDDMK 901 950 ENSTTRP00000003908/1-935 KSLQFSPIDK YGYVSDPMSP MHFHSCRNCG SFEDSS BACU009956/1-218 ---------- ---------- ---------- ------ bmy_07457T0/1-445 ---------- ---------- ---------- ------ ENSBTAP00000001278/1-835 KSLQFSTIDK YGYVSDPMSP MHFHSCRNSG SFEDSS