KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:13:44 2014 Check: 00 .. Name: ENSP00000357167/1-734 Len: 846 Check: 8989 Weight: 1.00 Name: ENSBTAP00000001279/1-717 Len: 846 Check: 6320 Weight: 1.00 Name: bmy_15526T0/1-798 Len: 846 Check: 6324 Weight: 1.00 Name: ENSTTRP00000005825/1-704 Len: 846 Check: 6139 Weight: 1.00 // 1 50 ENSP00000357167/1-734 MLLWLLLLIL TPGREQSGVA PKAVLLLNPP WSTAFKGEKV ALICSSISHS ENSBTAP00000001279/1-717 VLLEHFSDCL TPGRDQSGVT PKAFLLLNPP WSTNFHKDEV TLTCRD-SLS bmy_15526T0/1-798 ---------- --------VT PKAFLLLNPP WSTNFKNDRV TLTCRD-SLS ENSTTRP00000005825/1-704 ---------- -PGRDQSGVT PKAFLLLNPP WSTNFKNDRV TLTCRD-SLS 51 100 ENSP00000357167/1-734 LAQGDTYWYH DEKLLKIKHD KIQITEPGNY QCKTRGSSLS DAVHVEFSPD ENSBTAP00000001279/1-717 PAQGDIYWYY NENLLNKKSE EIQIHKTGYY KCKTQRSSLS DPVHVDFSFD bmy_15526T0/1-798 PAQGDISWYH NDHLLDNKFE EIQIHKTGYY KCKTRRSSPS DPVHVDFLSD ENSTTRP00000005825/1-704 PAQGDISWYH DDHLLDNKSE EIQIHKTGYY KCKTRRSSPS DPVHMDFLSD 101 150 ENSP00000357167/1-734 WLILQALHPV FEGDNVILRC QGKDNKNTHQ KVYYKDGKQL PNSYNLEKIT ENSBTAP00000001279/1-717 KLILQAPHSV FEGDEVVLRC QAREEAK--E KRFYRNEIQI Q-----SNFT bmy_15526T0/1-798 RLIIQAPHPV FEGDDVTLRC QGREETS--E TVLYKNEKKI SKSS-KSKFT ENSTTRP00000005825/1-704 RLIIQAPHPV FEGDDVVLRC QGKSNN---E TVLYKNKKEI RKSY-ISNFT 151 200 ENSP00000357167/1-734 VNSVSRDNSK YHCTAYRK-F YILDIEVTSK PLNIQVQELF LHPVLRASSS ENSBTAP00000001279/1-717 LQSVSMNNDK YHCTALVRGF WTW-NKEISK HLMIQVQELF SPPMLIASPS bmy_15526T0/1-798 LNSVSRDNGK YYCTASQKKF WGITKKEISK PLTIQVQELF PPPVLTARPS ENSTTRP00000005825/1-704 LNSVSRDNGK YHCTASRKNL WGI-KRDISK PLTIQVQELF PPPVLTARPS 201 250 ENSP00000357167/1-734 TPIEGSPMTL TCETQLSPQR PDVQLQFSLF RDSQTLGLGW SRSPRLQIPA ENSBTAP00000001279/1-717 SPTEGSPVTL KCETWLPPQR SHIQLQFCFF REDKALGKCW SSSPELKLPT bmy_15526T0/1-798 QPIEGRPVTL KCETWLPPQR SYIQLQFCFF REDQALGSGW SSSPELNLPT ENSTTRP00000005825/1-704 QPIEGRPVTL KCETWLPPQR SYIQLQFCFF REEQALGSGW SSSPELNLPT 251 300 ENSP00000357167/1-734 MWTEDSGSYW CEVETVTHSI KKRSLRSQIR VQRVPVSNVN LEIRPTGGQL ENSBTAP00000001279/1-717 VWSEDAESYW CQAESVTPPI RKRSLRSQLY VQRIPVSDVT LEIQPPEGQL bmy_15526T0/1-798 IWSEDAGSYW CQAETVTHRV RKRSLRSQIR VQRVPVSDVN LEIQPPEGQL ENSTTRP00000005825/1-704 MWSEDSGSYW CQAETVTHHV RKRSLRSQIH VQRVPVSDVN LEIRPPEGQL 301 350 ENSP00000357167/1-734 IEGENMVLIC SVAQGSGTVT FSWHKEGRVR SLGRKTQRSL LAELHVLTVK ENSBTAP00000001279/1-717 TEGENLLLIC SVAKGTGTVT FSWHREGTVR SLGRKTQRSL SAVLQILTVK bmy_15526T0/1-798 IEGENLLLIC SVAKGTGTVT FSWHREGTVR SLGTKTQRSL LAELQILTVK ENSTTRP00000005825/1-704 IEGENLLLIC SVAKGTGTVT FSWHREGTVR SLGTKTQRSL SAELQILTVK 351 400 ENSP00000357167/1-734 ESDAGRYYCA ADNVHSPILS TWIRVTVRIP VSHPVLTFRA PRAHTVVGDL ENSBTAP00000001279/1-717 ESDAGRYYCA ADNIHGPILS KLIRVTLRIP VSRPVFTLTS PRMQAMVGDV bmy_15526T0/1-798 ERDAGRYYCA ADNIHGPILS KLIRVTLRM- -SRPVLTLRA PGAQAVVGDV ENSTTRP00000005825/1-704 EHDAGRYYCA ADNIHGPILS KLIKVTLRIP VSRPVLTLRA PGAQIVVGDV 401 450 ENSP00000357167/1-734 LELHCESLRG SPPILYRFYH EDVTLGNSSA PSGGGASFNL SLTAEHSGNY ENSBTAP00000001279/1-717 VELHCESQRG SPPILYRFYH ENVTLGSSSV PSGRAV-FKF SLTADHSGNY bmy_15526T0/1-798 MELHCEARRG SPPILYRFYH EDVSLGSSSV PSGRGF-FNL SLTAEHSGNY ENSTTRP00000005825/1-704 MELHCEAWRG SPLILYQFYH DGVSLGSSSV PSGRAF-FKF SLTAEHSGNY 451 500 ENSP00000357167/1-734 SCDADNGLGA QHSHGVSLRV TVPVSRPVLT LRAPGAQAVV GDLLELHCES ENSBTAP00000001279/1-717 SCEADNSLGV QRSDRVILSV TVPVSHPLFT FSPAVPQAVA GDVLELRCEA bmy_15526T0/1-798 SCEADNGLGV QLSDRVTLNV TVPVSHPVFT FHPAGAQGMV GDVLELRCEA ENSTTRP00000005825/1-704 SCEADNGLGV QISDRVTLSV TVPVSHPVFT FHPAGAQAMV GDVLELRCEA 501 550 ENSP00000357167/1-734 LRGSFPILYW FYHEDDTLGN ISAHSGGGAS FNLSLTTEHS GNYSCEADNG ENSBTAP00000001279/1-717 QRGSPPILYW FYYKNVTLGS REAPFGGGAS FNLTLMAEHS GNFSCGADNG bmy_15526T0/1-798 QRGSPPILYW FYHKNVTLGS ISAPFGGGAS FNLSLMAEHS GNFFCGADNG ENSTTRP00000005825/1-704 QRGSPPILYS FYHKNVTLGS ISDPFGGGAS FNLTLMAEHS GNFSCGADNG 551 600 ENSP00000357167/1-734 LGAQHSKVVT LNVTGTSRNR TGLTAAGITG LVLSILVLAA AAALLHYARA ENSBTAP00000001279/1-717 LGIQHSEMVI LSIIGPPSNK TTLITEGVTA GLLSILGLAV TAALVCHFRT bmy_15526T0/1-798 LGVQRSEMVT LSITGPSSNK ITLITEGVTA GLLSILGLAA TAALVCYFRI ENSTTRP00000005825/1-704 LGVQRSEMVT LSVTGPSSNK ITLITKGVTA GLLSILGLAA TAALVCYFRT 601 650 ENSP00000357167/1-734 RRKPGGLSAT GTSSHSPSEC QEPSSSRPSR IDPQEPTHSK PLAPMELEPM ENSBTAP00000001279/1-717 QRNSERLSTT GTPSYSPREF KEP--SRTSN TNPQEP---- -LDPVEPQPV bmy_15526T0/1-798 QRNS--VTVP G----SLGNL LEP----PTQ T-PKSP---- --VTLNHQTQ ENSTTRP00000005825/1-704 QRNSGGLSTT GTPSYSPKEF KEP--SRTSH TDPQEPTYSE PPDPMEQQPV 651 700 ENSP00000357167/1-734 YSNVNPGDSN PIYSQIWSIQ HTKENSANCP MMHQEHEELT VLYSELKKTH ENSBTAP00000001279/1-717 YNNVNPGDSD LVYSEIWSTQ HTNENSANSP RKHWEDKEPT VIYSDLKKAY bmy_15526T0/1-798 WNCSQCTAMW VLVRTTWFIP RS-----GAS KIKKKIQEPA VIYSELKKAH ENSTTRP00000005825/1-704 YSNVDLGESN LVYSQICSIQ DTKENSANSP KKHWEDKEPV VIYSELKKAH 701 750 ENSP00000357167/1-734 PDDSAGEASS RGRAHEEDDE ENYENVPR-- ---------- ---------- ENSBTAP00000001279/1-717 PDDSTEQASI VDSDL-EDAV ENYENVPC-- ---------- ---------- bmy_15526T0/1-798 LDDSAGLAIN QDRDL-EDAA ENYENVPCAL SININLGRSV EPMIHMTQIY ENSTTRP00000005825/1-704 LDDSAGLVIN QDRDL-EDAA ENYEN----- ---------- ---------- 751 800 ENSP00000357167/1-734 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001279/1-717 ---------- ---------- ---------- ---------- ---------- bmy_15526T0/1-798 LMERKAPNTN MDPQQRKWQL ANSSVLGFPF SKSSGPCLLV PLWTASVLRS ENSTTRP00000005825/1-704 ---------- ---------- ---------- ---------- ---------- 801 850 ENSP00000357167/1-734 ---------- ---------- ----VLLASD H--------- ------ ENSBTAP00000001279/1-717 ---------- ---------- ----VLSALD R--------- ------ bmy_15526T0/1-798 KYNCQFPRGT ASESPGTRLH AAVDLLLVLD YVFLNIEVVE NSEKIF ENSTTRP00000005825/1-704 ---------- ---------- ---------- ---------- ------