KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:45 2014 Check: 00 .. Name: bmy_05765T0/1-608 Len: 712 Check: 199 Weight: 1.00 Name: ENSTTRP00000000950/1-562 Len: 712 Check: 8478 Weight: 1.00 Name: BACU008015/1-484 Len: 712 Check: 8976 Weight: 1.00 Name: ENSP00000228468/1-574 Len: 712 Check: 57 Weight: 1.00 Name: ENSBTAP00000001283/1-526 Len: 712 Check: 2346 Weight: 1.00 // 1 50 bmy_05765T0/1-608 GSGPAPLHRT PFPTAINYSS AQTAASLTGQ DGPPLLSKPL PTSATLPQRP ENSTTRP00000000950/1-562 ---------- ---------- ---------- ---------- ---------- BACU008015/1-484 ---------- ---------- ---------- ---------- ---------- ENSP00000228468/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001283/1-526 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_05765T0/1-608 WQGRTASQAA ETWQEDCWTL PRITSPPLFS CPPPGARKPL EKMPIQIFCS ENSTTRP00000000950/1-562 ---------- ---------- ---------- ---------- ---------- BACU008015/1-484 ---------- ---------- ---------- ---------- ---------- ENSP00000228468/1-574 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001283/1-526 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_05765T0/1-608 VSFSSGEEAP GPLGDIWGPH QRQQRDNSES EEEGEEKEKE AERKGARERD ENSTTRP00000000950/1-562 ---------- ---------- ---------- ---MELKAEE EEVGGVQ--- BACU008015/1-484 ---------- ---------- ---------- ---MELKAEE EEVGGVQ--- ENSP00000228468/1-574 ---------- ---------- ---------- ---MELKAEE EEVGGVQ--- ENSBTAP00000001283/1-526 ---------- ---------- ---------- ---MELKAEE EEVGGLQ--- 151 200 bmy_05765T0/1-608 LPMDLVAFAN SCTLHGASHI FVEGGPGPRQ ALWAAAFILA LGAFLCQVGD ENSTTRP00000000950/1-562 -PVSIQAFAS SSTLHGLAHI FSYERLSLKR ALWALCFLGS LAVLLCVCTE BACU008015/1-484 -PVSIQAFAS SSTLHGLAHI FSYERLSLKR ALWALCFLGS LAVLLCVCTE ENSP00000228468/1-574 -PVSIQAFAS SSTLHGLAHI FSYERLSLKR ALWALCFLGS LAVLLCVCTE ENSBTAP00000001283/1-526 -PVSIQAFAS SSTLHGLAHI FSYERLSLKR ALWALCFLGS LAVLLCVCTE 201 250 bmy_05765T0/1-608 RVAYYLSYPH VTLLDEVATT ELAFPAVTLC NTNAVRLSQL SYPDLLYLAP ENSTTRP00000000950/1-562 RVQYYFHYHH VTKLDEVAAS QLTFXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008015/1-484 RVQYYFHYHH VTKLDEVAAS QLTFPAVTLC NLNEFRFSQV SKNDLYHAGE ENSP00000228468/1-574 RVQYYFHYHH VTKLDEVAAS QLTFPAVTLC NLNEFRFSQV SKNDLYHAGE ENSBTAP00000001283/1-526 RVQYYFHYHH VTKLDEVAAS QLTFPAVTLC NLNEFRFSQV SKNDLYHAGE 251 300 bmy_05765T0/1-608 MLGL------ ------DESD DPGVPLAPPG PEAFSGEPFN LHRFYNRSCH ENSTTRP00000000950/1-562 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU008015/1-484 LLALLNNRYE IPDTQMADEK QLEILQDKAN FRSFKPKPFN MREFYDRAGH ENSP00000228468/1-574 LLALLNNRYE IPDTQMADEK QLEILQDKAN FRSFKPKPFN MREFYDRAGH ENSBTAP00000001283/1-526 LLALLNNRYE IPDTQMADEK QLEILQDKAN FRSFKPKPFN MREFYDRAGH 301 350 bmy_05765T0/1-608 RLEDMLLYCS YCGGPCGPHN FSVVFTRYGK CYTFNSGRDG RPRLKTMKGG ENSTTRP00000000950/1-562 XXXXXXXXXX XXXXXXXXXX XXXVFTRYGK CYTFNSGRDG RPRLKTMKGG BACU008015/1-484 DIRDMLLSCH FRGEVCSAED FKVV------ ---------- ---------- ENSP00000228468/1-574 DIRDMLLSCH FRGEVCSAED FKVVFTRYGK CYTFNSGRDG RPRLKTMKGG ENSBTAP00000001283/1-526 DIRDMLLSCH FRGEVCSAED FKVVFTRYGK CYTFNSGRDG RPRLKTMKGG 351 400 bmy_05765T0/1-608 TGNGLEIMLD IQQDEYLPVW GETDETSFEA GIKVQIHSQD EPPFIDQLGF ENSTTRP00000000950/1-562 TGNGLEIMLD IQQDEYLPVW GETDETSFEA GIKVQIHSQD EPPFIDQLGF BACU008015/1-484 --SELGVVM- ---------- ---DETSFEA GIKVQIHSQD EPPFIDQLGF ENSP00000228468/1-574 TGNGLEIMLD IQQDEYLPVW GETDETSFEA GIKVQIHSQD EPPFIDQLGF ENSBTAP00000001283/1-526 TGNGLEIMLD IQQDEYLPVW GETDETSFEA GIKVQIHSQD EPPFIDQLGF 401 450 bmy_05765T0/1-608 GVAPGFQTFV ACQEQRQLIY LPPPWGTCKA VTM--DLDFF DSYSITACRI ENSTTRP00000000950/1-562 GVAPGFQTFV ACQEQR-LIY LPPPWGTCKA VTM--DLDFF DSYSITACRI BACU008015/1-484 GVAPGFQTFV ACQEQR-LIY LPPPWGTCKA VTM--DLDFF DSYSITACRI ENSP00000228468/1-574 GVAPGFQTFV ACQEQR-LIY LPPPWGTCKA VTMDSDLDFF DSYSITACRI ENSBTAP00000001283/1-526 GVAPGFQTFV ACQEQR-LIY LPPPWGTCKA VTM--DLDFF DSYSITACRI 451 500 bmy_05765T0/1-608 DCETRYLVEN CNCRMVHMPG DAPYCTPEQY KECADPALDF LVEKDQEYCV ENSTTRP00000000950/1-562 DCETRYLVEN CNCRMVHMPG DAPYCTPEQY KECADPALDF LVEKDQEYCV BACU008015/1-484 DCETRYLVEN CNCRMVHMPG DAPYCTPEQY KECADPALDF LVEKDQEYCV ENSP00000228468/1-574 DCETRYLVEN CNCRMVHMPG DAPYCTPEQY KECADPALDF LVEKDQEYCV ENSBTAP00000001283/1-526 DCETRYLVEN CNCRMVHMPG DAPYCTPEQY KECADPALDF LVEKDQEYCV 501 550 bmy_05765T0/1-608 CEMPCNLTRY GKELSMVKIP SKASAKYLAK KFNKSEQYIG ---------- ENSTTRP00000000950/1-562 CEMPCNLTRY GKELSMVKIP SKASAKYLAK KFNKSEQYIG ENILVLDIFF BACU008015/1-484 CEMPCNLTRY GKELSMVKIP SKASAKYLAK KFNKSEQYIG ENILVLDIFF ENSP00000228468/1-574 CEMPCNLTRY GKELSMVKIP SKASAKYLAK KFNKSEQYIG ENILVLDIFF ENSBTAP00000001283/1-526 CEMPCNLTRY GKELSMVKIP SKASAKYLAK KFNKSEQYIG ENILVLDIFF 551 600 bmy_05765T0/1-608 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000950/1-562 EVLNYETIEQ KKAYEIAGLL GELLMASVPF PCHGHGVTPY H-EAGCSPPS BACU008015/1-484 EVLNYETIEQ KKAYEIAGL- ---------- ---------- ---------- ENSP00000228468/1-574 EVLNYETIEQ KKAYEIAGLL GELLMTPVPF SCHGHGVAPY HPKAGCSLLS ENSBTAP00000001283/1-526 EVLNYETIEQ KKAYEIAGL- ---------- ---------- ---------- 601 650 bmy_05765T0/1-608 ---------- ---------- ---------- ILTVLELFDY AYEVIKHKLC ENSTTRP00000000950/1-562 HKPPPL---- -----SPDIG GQMGLFIGAS ILTVLELFDY AYEVIKHKLC BACU008015/1-484 ---------- -----LGDIG GQMGLFIGAS ILTVLELFDY AYEVIKHKLC ENSP00000228468/1-574 HEGPPPQRPF PKPCCLGDIG GQMGLFIGAS ILTVLELFDY AYEVIKHKLC ENSBTAP00000001283/1-526 ---------- -----LGDIG GQMGLFIGAS ILTVLELFDY AYEVIKHKLC 651 700 bmy_05765T0/1-608 RRGKCQKEVK RSSADKGVAL SLDDVKRHNP CESLRGHPAG MTYAANILPH ENSTTRP00000000950/1-562 RRGKCQKEAK RSSADKGVAL SLDDVKRHNP CESLRGHPAG MTYAANILPH BACU008015/1-484 RRGKCQKEAK RSSADKGVAL SLDDVKRHNP CESLRGHPAG MTYAANILPH ENSP00000228468/1-574 RRGKCQKEAK RSSADKGVAL SLDDVKRHNP CESLRGHPAG MTYAANILPH ENSBTAP00000001283/1-526 RRGKCQKEAK RSSADKGVAL SLDDVKRHNP CESLRGHPAG MTYAANILPH 701 750 bmy_05765T0/1-608 HPARGTFEDF TC ENSTTRP00000000950/1-562 HPARGTFEDF TC BACU008015/1-484 HPARGTFEDF TC ENSP00000228468/1-574 HPARGTFEDF TC ENSBTAP00000001283/1-526 HPARGTFEDF TC