KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:48 2014 Check: 00 .. Name: ENSP00000340896/1-628 Len: 629 Check: 4371 Weight: 1.00 Name: ENSBTAP00000001294/1-629 Len: 629 Check: 2298 Weight: 1.00 Name: bmy_16861T0/1-597 Len: 629 Check: 6715 Weight: 1.00 Name: BACU007417/1-596 Len: 629 Check: 8878 Weight: 1.00 Name: ENSTTRP00000004218/1-628 Len: 629 Check: 3529 Weight: 1.00 // 1 50 ENSP00000340896/1-628 MAAAGAGPGQ EAGAGPGPGA VANATGAEEG EMKPVAAGAA APPGEGISAA ENSBTAP00000001294/1-629 MAAAGSGPGL GVSAGPGPAA AANATPAEEG ETKQAAAVAA APAGEGTSAA bmy_16861T0/1-597 MAAAGTGPGP GVNAGPGPAV AANATPAEEG ETKPVVAVAA APAGEGTSAA BACU007417/1-596 MAAAGIVPGP GVNAGPSPAV AANATPAEEG ETKPVVAVAA APAGEGTSAA ENSTTRP00000004218/1-628 MAAAGTVPGP GVNAGPGPAV AANATPAEEG ETKPVVAVAA APAGEGTSAA 51 100 ENSP00000340896/1-628 PT-VEPSSGE AEGGEANLVD VSGGLETESS NGKDTLEGAG DTSEVMDTQA ENSBTAP00000001294/1-629 PASAEPGSGE AESGDANSVD VSGGLETESS NGKDTLEGAG DTSEVMDTQA bmy_16861T0/1-597 PA-AEPGSGE AESGDANSVD VSGGLETESS NGKDTLEGAG DTSEVMDTQA BACU007417/1-596 PA-AEPGSGE AESGDANSVD VSGGLETESS NGKDTLEGAG DTSEVMDTQA ENSTTRP00000004218/1-628 PA-AEPGSGE AESGDANSVD VSGGLETESS NGKDTLEGAG DTSEVMDTQA 101 150 ENSP00000340896/1-628 GSVDEENGRQ LGEVELQCGI CTKWFTADTF GIDTSSCLPF MTNYSFHCNV ENSBTAP00000001294/1-629 GSVDEENGRQ LGEVELQCGI CTKWFTADTF GIDTSSCLPF MTNYSFHCNV bmy_16861T0/1-597 GSVDEENGRQ LGEVELQCGI CTKWFTADTF GIDTSSCLPF MTNYSFHCNV BACU007417/1-596 GSVDEENGRQ LGEVELQCGI CTKWFTADTF GIDTSSCLPF MTNYSFHCNV ENSTTRP00000004218/1-628 GSVDEENGRQ LGEVELQCGI CTKWFTADTF GIDTSSCLPF MTNYSFHCNV 151 200 ENSP00000340896/1-628 CHHSGNTYFL RKQANLKEMC LSALANLTWQ SRTQDEHPKT MFSKDKDIIP ENSBTAP00000001294/1-629 CHHSGNTYFL RKQANLKEMC LSALANLTWQ SRTQDEHPKT MFSKDKDIIP bmy_16861T0/1-597 CHHSGNTYFL RKQANLKEMC LSALANLTWQ SRTQDEHPKT MFSKDKDIIP BACU007417/1-596 CHHSGNTYFL RKQANLKEMC LSALANLTWQ SRTQDEHPKT MFSKDK---- ENSTTRP00000004218/1-628 CHHSGNTYFL RKQANLKEMC LSALANLTWQ SRTQDEHPKT MFSKDKDIIP 201 250 ENSP00000340896/1-628 FIDKYWECMT TRQRPGKMTW PNNIVKTMSK ERDVFLVKEH PDPGSKDPEE ENSBTAP00000001294/1-629 FIDKYWECMT TRQRPGKMTW PNNIVKTMSK ERDVFLVKEH PDPGSKDPEE bmy_16861T0/1-597 FIDKYWECMT TRQRPGKMTW PNNIVKTMSK ERDVFLVKEH PDPGSKDPEE BACU007417/1-596 ---------- ---------- --------SK ERDVFLVKEH PDPGSKDPEE ENSTTRP00000004218/1-628 FIDKYWECMT TRQRPGKMTW PNNIVKTMSK ERDVFLVKEH PDPGSKDPEE 251 300 ENSP00000340896/1-628 DYPKFGLLDQ DLSNIGPAYD NQKQSSAVST SGNLNGGIAA GSSGKGRGAK ENSBTAP00000001294/1-629 DYPKFGLLDQ DLSNIGPAYD NQKQSSAVST SGNLNGGIAA GSSGKGRGAK bmy_16861T0/1-597 DYPKFGLLDQ DLSNIGPAYD NQKQSSAVST SGNLNGGIAA GSSGKGRGAK BACU007417/1-596 DYPKFGLLDQ DLSNIGPAYD NQKQSSAVST SGNLNGGIAA GSSGKGRGAK ENSTTRP00000004218/1-628 DYPKFGLLDQ DLSNIGPAYD NQKQSSAVST SGNLNGGIAA GSSGKGRGAK 301 350 ENSP00000340896/1-628 RKQQDGGTTG TTKKARSDPL FSAQRLPPHG YPLEHPFNKD GYRYILAEPD ENSBTAP00000001294/1-629 RKQQDGSTAG TTKKARSDPL FSAQRLPPHG YPLEHPFNKD GYRYILAEPD bmy_16861T0/1-597 RKQQDGGATG TTKKARSDPL FSAQRLPPHG YPLEHPFNKD GYRYILAEPD BACU007417/1-596 RKQQDGGATG TTKKARSDPL FSAQRLPPHG YPLEHPFNKD GYRYILAEPD ENSTTRP00000004218/1-628 RKQQDGGATG TTKKARSDPL FSAQRLPPHG YPLEHPFNKD GYRYILAEPD 351 400 ENSP00000340896/1-628 PHAPDPEKLE LDCWAGKPIP GDLYRACLYE RVLLALHDRA PQLKISDDRL ENSBTAP00000001294/1-629 PHAPDPEKLE LDCWAGKPIP GDLYRACLYE RVLLALHDRA PQLKISDDRL bmy_16861T0/1-597 PHAPDPEKLE LDCWAGKPIP GDLYRACLYE RVLLALHDRA PQLKISDDRL BACU007417/1-596 PHAPDPEKLE LDCWAGKPIP GDLYRACLYE RVLLALHDRA PQLKISDDRL ENSTTRP00000004218/1-628 PHAPDPEKLE LDCWAGKPIP GDLYRACLYE RVLLALHDRA PQLKISDDRL 401 450 ENSP00000340896/1-628 TVVGEKGYSM VRASHGVRKG AWYFEITVDE MPPDTAARLG WSQPLGNLQA ENSBTAP00000001294/1-629 TVVGEKGYSM VRASHGVRKG AWYFEITVDE MPPDTAARLG WSQPLGNLQA bmy_16861T0/1-597 TVVGEKGYSM VRASHGVRKG AWYFEITVDE MPPDTAARLG WSQPLGNLQA BACU007417/1-596 TVVGEKGYSM VRASHGVRKG AWYFEITVDE MPPDTAARLG WSQPLGNLQA ENSTTRP00000004218/1-628 TVVGEKGYSM VRASHGVRKG AWYFEITVDE MPPDTAARLG WSQPLGNLQA 451 500 ENSP00000340896/1-628 PLGYDKFSYS WRSKKGTKFH QSIGKHYSSG YGQGDVLGFY INLPEDTETA ENSBTAP00000001294/1-629 PLGYDKFSYS WRSKKGTKFH QSIGKHYSSG YGQGDVLGFY INLPEDTETA bmy_16861T0/1-597 PLGYDKFSYS WRSKKGTKFH QSIGKHYSSG YGQGDVLGFY ISLPEDTETA BACU007417/1-596 PLGYDKFSYS WRSKKGTKFH QSIGKHYSSG YGQGDVLGFY ISLPEDTETA ENSTTRP00000004218/1-628 PLGYDKFSYS WRSKKGTKFH QSIGKHYSSG YGQGDVLGFY ISLPEDTETA 501 550 ENSP00000340896/1-628 KSLPDTYKDK ALIKFKSYLY FEEKDFVDKA EKSLKQTPHS EIIFYKNGVN ENSBTAP00000001294/1-629 KSLPDTYKDK ALIKFKSYLY FEEKDFVDKA EKSLKQTPHS EIIFYKNGVN bmy_16861T0/1-597 KSLPDTYKDK ---------- ---------- ---------- -IIFYKNGVN BACU007417/1-596 KSLPDTYKDK ALIKFKSYLY FEEKDFVDKA EKSLKQTPHS EIIFYKNGVN ENSTTRP00000004218/1-628 KSLPDTYKDK ALIKFKSYLY FEEKDFVDKA EKSLKQTPHS EIIFYNNGVN 551 600 ENSP00000340896/1-628 QGVAYKDIFE GVYFPAISLY KSCTVSINFG PCFKYPPKDL TYRPMSDMGW ENSBTAP00000001294/1-629 QGVAYKDIFE GVYFPAISLY KSCTVSINFG PCFKYPPKDL TYRPMSDMGW bmy_16861T0/1-597 QGVAYKDIFE GVYFPAISLY KSCTVSINFG PCFKYXPKDL TYRPMSDMGW BACU007417/1-596 QGVAYKDIFE GVYFPAISLY KSCTVSINFG PCFKYPPKDL MYRPMSDMGW ENSTTRP00000004218/1-628 QGVAYKDIFE GVYFPAISLY KSCTVSINFG PCFKYPPKDL MYRPMSDMGW 601 650 ENSP00000340896/1-628 GAVVEHTLAD VLYHVETEVD GRRSPPWEP ENSBTAP00000001294/1-629 GAVVEHTLAD VLYHVETEVD GRRSPPWEP bmy_16861T0/1-597 GAVVEHTLAD VLYHVETEVD GRRSPPWEP BACU007417/1-596 GAVVEHTLAD VLYHVETEVD GRRSPPWEP ENSTTRP00000004218/1-628 GAVVEHTLAD VLYHVETEVD GRRSPPWEP