KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:54 2014 Check: 00 .. Name: bmy_08746T0/1-331 Len: 538 Check: 7967 Weight: 1.00 Name: ENSTTRP00000003881/1-521 Len: 538 Check: 5384 Weight: 1.00 Name: ENSP00000318298/1-442 Len: 538 Check: 9591 Weight: 1.00 Name: BACU002023/1-424 Len: 538 Check: 15 Weight: 1.00 Name: ENSBTAP00000001319/1-434 Len: 538 Check: 7673 Weight: 1.00 // 1 50 bmy_08746T0/1-331 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000003881/1-521 MQMRRVWRAC GAGPRKRREA RYKXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318298/1-442 MAEGEGYFAM SEDELACSPY IPL------- ---------- ---------- BACU002023/1-424 ---------M AEDELAGGPY IPL------- ---------- ---------- ENSBTAP00000001319/1-434 MAEGEEYFAM AEDELAGGPY IPL------- ---------- ---------- 51 100 bmy_08746T0/1-331 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000003881/1-521 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318298/1-442 ---------- ---------- ---------- ---------- ---------G BACU002023/1-424 ---------- ---------- ---------- ---------- ---------A ENSBTAP00000001319/1-434 ---------- ---------- ---------- ---------- ---------G 101 150 bmy_08746T0/1-331 TRHKRREF-- ---------- ---YVGSC-- ---------- ---------- ENSTTRP00000003881/1-521 XXXXXXXX-- ---------- ---XXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000318298/1-442 GDFGGGDFGG GDFGGGDFGG GGSFGGHC-- ---------- --------LD BACU002023/1-424 GDFSGGDFG- --------GG GGGFGGHC-- ---------- --------LD ENSBTAP00000001319/1-434 GDLSGGDCGG --------GG GGGFAGHC-- ---------- --------LE 151 200 bmy_08746T0/1-331 -CSCASLAGN QFLWEESSLQ QRLVNGLIIV LG-------- ---------- ENSTTRP00000003881/1-521 XXXXXXXXXX XXXXEQVQRL -GILSETIPI HGRGNF-TLE LQPSLIVKVV ENSP00000318298/1-442 YCESPTAHCN VLNWEQVQRL DGILSETIPI HGRGNFPTLE LQPSLIVKVV BACU002023/1-424 YCESPTAHCN VLNWEQVQRL DGILSETIPI HGRGNFPTLE LQPSLIVKVV ENSBTAP00000001319/1-434 YCESPTAHCN VLNWEQVQRL DGILSETIPI HGRGNFPTLE LQPSLIVKVV 201 250 bmy_08746T0/1-331 ---------- ------NVTR FPSCLHVTP- ---------- CRSPGGPTRY ENSTTRP00000003881/1-521 RRRLAEKRIG VRDVRLNGSA ASHVLHQDSG LGYKDLDLIF CADLRGEEEF ENSP00000318298/1-442 RRRLAEKRIG VRDVRLNGSA ASHVLHQDSG LGYKDLDLIF CADLRGEGEF BACU002023/1-424 RRRLAEKRIG VRDVRLNGSA ASHVLHQDSG LGYKDLDLIF CADLRGEEEF ENSBTAP00000001319/1-434 RRRLAEKRIG VRDVRLNGSA ASHVLHQDSG LGYKDLDLIF CADLRGEEEF 251 300 bmy_08746T0/1-331 RSCR------ ----FPQQEG NE-------- EAYVQKMVKV CNDSDRWSLI ENSTTRP00000003881/1-521 QTVKDVVLDC LLDFLPEGVN KEKITPLTLK EAYVQKMVKV CNDSDRWSLI ENSP00000318298/1-442 QTVKDVVLDC LLDFLPEGVN KEKITPLTLK EAYVQKMVKV CNDSDRWSLI BACU002023/1-424 QTVKDVVLDC LLDFLPEGVN KEKITPLTLK EAYVQKMVKV CNDSDRWSLI ENSBTAP00000001319/1-434 QTVKDVVLDC LLDFLPEGVN KEKITPLTLK EAYVQKMVKV CNDSDRWSLI 301 350 bmy_08746T0/1-331 SLSNNSGKNV ELKFVDSLRR QFEFSVDSFQ IKLDSLLLFY ECSENPMTET ENSTTRP00000003881/1-521 SLSNNSGKNV ELKFVDSLRR QFEFSVDSFQ IKLDSLLLFY ECSENPMTET ENSP00000318298/1-442 SLSNNSGKNV ELKFVDSLRR QFEFSVDSFQ IKLDSLLLFY ECSENPMTET BACU002023/1-424 SLSNNSGKNV ELKFVDSLRR QFEFSVDSFQ IKLDSLLLFY ECSENPMTET ENSBTAP00000001319/1-434 SLSNNSGKNV ELKFVDSLRR QFEFSVDSFQ IKLDSLLLFY ECSENPMTET 351 400 bmy_08746T0/1-331 FHPTIIGESV YGDFHEAFDH LCNKIIATRN PEEIRGGGLL KYCNLLVRGF ENSTTRP00000003881/1-521 FHPTIIGESV YGDFHEAFDH LCNKIIATRN PEEIRGGGLL KYCNLLVRGF ENSP00000318298/1-442 FHPTIIGESV YGDFQEAFDH LCNKIIATRN PEEIRGGGLL KYCNLLVRGF BACU002023/1-424 FHPTIIGESV YGDFHEAFDH LCNKIIATRN PEEIRGGGLL KYCNLLVRGF ENSBTAP00000001319/1-434 FHPTIIGESV YGDFHEAFDH LCNKIIATRN PEEIRGGGLL KYCNLLVRGF 401 450 bmy_08746T0/1-331 RPASDEIKTL QRYMCSRFFI DFSDIGEQQR KLESYLQNHF VGLEDRKYDY ENSTTRP00000003881/1-521 RPASDEIKTL QRYMCSRFFI DFSDIGEQQR KLESYLQNHF VGLEDRKYDY ENSP00000318298/1-442 RPASDEIKTL QRYMCSRFFI DFSDIGEQQR KLESYLQNHF VGLEDRKYEY BACU002023/1-424 RPASDEIKTL QRYMCSRFFI DFSDIGEQQR KLESYLQNHF VGLEDRKYDY ENSBTAP00000001319/1-434 RPASDEIKTL QRYMCSRFFI DFSDIGEQQR KLESYLQNHF VGLEDRKYDY 451 500 bmy_08746T0/1-331 LMTLHGVVNE STVCLMGHER RQTLNLITML AIRVLADQNV IPNVANVTCY ENSTTRP00000003881/1-521 LMTLHGVVNE STVCLMGHER RQTLNLITML AIRVLADQNV IPNVANVTCY ENSP00000318298/1-442 LMTLHGVVNE STVCLMGHER RQTLNLITML AIRVLADQNV IPNVANVTCY BACU002023/1-424 LMTLHGVVNE STVCLMGHER RQTLNLITML AIRVLADQNV IPNVANVTCY ENSBTAP00000001319/1-434 LMTLHGVVNE STVCLMGHER RQTLNLITML AIRVLADQNV IPNVANVTCY 501 550 bmy_08746T0/1-331 YQPAPYVADA NFSNYYIAQ- ------DDMR RGHIAVMN ENSTTRP00000003881/1-521 YQPAPYVADA NFSNYYIAQV QPVFTCQQQT YFTWLPCN ENSP00000318298/1-442 YQPAPYVADA NFSNYYIAQV QPVFTCQQQT YSTWLPCN BACU002023/1-424 YQPAPYVADA NFSNYYIAQV QPVFTCQQQT YSTWLPCN ENSBTAP00000001319/1-434 YQPAPYVADA NFSNYYIAQV QPVFTCQQQT YSTWLPCN