KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:55 2014 Check: 00 .. Name: ENSP00000269187/1-755 Len: 759 Check: 1782 Weight: 1.00 Name: ENSBTAP00000001322/1-747 Len: 759 Check: 5207 Weight: 1.00 Name: ENSTTRP00000006710/1-733 Len: 759 Check: 599 Weight: 1.00 Name: bmy_11345T0/1-699 Len: 759 Check: 1943 Weight: 1.00 Name: BACU001597/1-728 Len: 759 Check: 4162 Weight: 1.00 // 1 50 ENSP00000269187/1-755 MARKLSVILI LTFALSVTNP LHEL-KAAAF PQTTEKISPN WESGINVDLA ENSBTAP00000001322/1-747 MARNLSVILI LTFTLSVTNP LHEVGPATAF PQTTEKIIPS WESGINVNLA ENSTTRP00000006710/1-733 MARNLSVILI LTFVLSVTHP LHEVGPATAF PQTTEKIIPN WESGINVDLA bmy_11345T0/1-699 MARNLSVILI LTFVLSVTNP LHEVGPATAF PQTTEKIIPN WESGINVDLA BACU001597/1-728 MARNLSVILI LTFVLSVTNP LHEVGPATAF PQTTEKIIPN WESGINVDLA 51 100 ENSP00000269187/1-755 ISTRQYHLQQ LFYRYGENNS LSVEGFRKLL QNIGIDKIKR IHIHHDHDHH ENSBTAP00000001322/1-747 VTTRQHHLQQ LFHRYGENNS LSIEGFKKLL QNIGIDKIKR VHIHHDHEHH ENSTTRP00000006710/1-733 VTTRQHHLQQ LFHRYGENNS LSIEGFRKLL QNIGIDKIKR IHIHHDHEHH bmy_11345T0/1-699 VTTRQHHLQQ LFHRYGENNS LSIEGFRKLL QNIGIDKIKR IHIHHDHE-- BACU001597/1-728 VTTRQHHLQQ LFHRYGENNS LSIEGFRKLL QNIGIDKIKR IHIHHDHE-- 101 150 ENSP00000269187/1-755 SDHEHHSDHE RHSDHEHHSE HEHHSDHDHH SHHNHAASGK NKRKALCPDH ENSBTAP00000001322/1-747 SDHEHRSD-- ---------- HEHHSDHEHH SHHNHAASSK NSRKALCPDH ENSTTRP00000006710/1-733 SDHE------ ---------- --------HH SHHNHAASSK N-RKALCPDH bmy_11345T0/1-699 ---------- ---------- --------HH SHHSHAASSK N-RKALCPDH BACU001597/1-728 ---------- ---------- --------HH SHHSHAASSK N-RKALCPDH 151 200 ENSP00000269187/1-755 DSDSSGKDPR NSQGKGAHRP EHASGRRNV- -KDSVSASEV TSTVYNTVSE ENSBTAP00000001322/1-747 DSDGSSKEPR NSHGKGSHRS EHASGRRNVL IKEGVGASEV TSTVYNAVSE ENSTTRP00000006710/1-733 DSDSSSKEPR NSQGKGPHRS EHASGRKNVL IKDGAGASEV TSTVYNAVSE bmy_11345T0/1-699 DSDSSSKEPR NSQGKGPHRS EHANGRRNVL IKDGAGASEV TSTVYNAVSE BACU001597/1-728 DSDSSSKEPR NNQGKGPHRS EHANGRRNVL IKDGAGASEV TSTVYNAVSE 201 250 ENSP00000269187/1-755 GTHFLETIET PRPGKLFPKD VSSSTPPSVT SKSRVSRLAG RKTNESVSEP ENSBTAP00000001322/1-747 GTHFLETIET PKHGKLLPKD VNSSTPPSVT GKSQASRLAS RRTNESMSEP ENSTTRP00000006710/1-733 GTHFLETIET P-HGKLLPKG VSSSTLPSVT EKSWATWLAS RKTNESVSEP bmy_11345T0/1-699 GTHFLETIET PKHGKLLPKG VSSSTLPSVT EKSWATWLAS RKTNESVSEP BACU001597/1-728 GTHFLETIET PKHGKLLPKG VSSSTLPSVT EKSWATWLAS RKTNESVSEP 251 300 ENSP00000269187/1-755 RKGFMYSRNT NENPQECFNA SKLLTSHGMG IQVPLNATEF NYLCPAIINQ ENSBTAP00000001322/1-747 RKDFMYSRSP SENTQECFNA SKLLTSHGMG IQVPLNATEF NYLCPAIINQ ENSTTRP00000006710/1-733 RNGFMYSRST NENTQECFNA SKLLTSHGMG IQVPLNATEF NYLCPAIINQ bmy_11345T0/1-699 RKGFMYSRST NENTQECFNA SKLLTSHGMG IQVPLNATEF NYLCPAIINQ BACU001597/1-728 RKGFMYSRST NENTQECFNA SKLLTSHGMG IQVPLNATEF NYLCPAIINQ 301 350 ENSP00000269187/1-755 IDARSCLIHT -SEKKAEIPP KTYSLQIAWV GGFIAISIIS FLSLLGVILV ENSBTAP00000001322/1-747 IDTRSCLIHT TSEKKAEIPP KTYSLQIAWV GGFIAISVIS FLSLLGVILV ENSTTRP00000006710/1-733 IDTRSCLIHT TSEKKAEIPP KTYSLQIAWV GGFIAISVIS FLSLLGVILV bmy_11345T0/1-699 IDTRSCLIHT TSEKKAEIPP KTYSLQIAWV GGFIAISVIS FLSLLGVILV BACU001597/1-728 IDTRSCLIHT ASEKKAEIPP KTYSLQIAWV GGFIAISVIS FLSLLGVILV 351 400 ENSP00000269187/1-755 PLMNRVFFKF LLSFLVALAV GTLSGDAFLH LLPHSHASHH HSHSHEEPAM ENSBTAP00000001322/1-747 PLMNRVFFKF LLSFLVALAV GTLSGDAFLH LLPHSHASHH HSHSHEEPAM ENSTTRP00000006710/1-733 PLMNRVFFKF LLSFLVALAV GTLSGDAFLH LLPHSHASHH HSHSHEEPAM bmy_11345T0/1-699 PLMNR----- ---------- ---------- ----SHASHH HSHSHEEPAM BACU001597/1-728 PLMNRVFFKF LLSFLVALAV GTLSGDAFLH LLPHSHASHH HSHSHEEPAM 401 450 ENSP00000269187/1-755 EMKRGPLFSH LSSQNIEESA YFDSTWKGLT ALGGLYFMFL VEHVLTLIKQ ENSBTAP00000001322/1-747 EMKKGPLFSH LSSQNIQENT YFDSTWKGLT ALGGLYFMFL VEHVLTLIKQ ENSTTRP00000006710/1-733 EIKRGPLFSH LSSQNIEEST YFDSTWKGLT ALGGLYFMFL VEHVLTLIKQ bmy_11345T0/1-699 EMKRGPLFSH LSSQNIEEST YFDSTWKGLT ALGGLYFMFL VEHVLTLIKQ BACU001597/1-728 EMKRGPLFSH LSSQNIEEST YFDSTWKGLT ALGGLYFMFL VEHVLTLIKQ 451 500 ENSP00000269187/1-755 FKDKKKKNQK KPENDDDVEI KKQLSKYESQ LSTNEEKVDT DDRTEGYLRA ENSBTAP00000001322/1-747 FKDKKKKNQK KPENDDDVEI KKQLSKYESQ LSTNEEKVDA DDRPEGYLRA ENSTTRP00000006710/1-733 FKDKKKKNQK KPENDDDVEI KKQLSQYESQ LSTNEEKVDA DDRPEGYLRA bmy_11345T0/1-699 FKDKKKKNQK KPENDDDVEI KKQLSQYESQ LSTNEEKVDA DDRPEGYLRA BACU001597/1-728 FKDKKKKNQK KPENDDDVEI KKQLSQYESQ LSTNEEKVDA DDRPEGYLRA 501 550 ENSP00000269187/1-755 DSQEPSHFDS QQPAVLEEEE VMIAHAHPQE VYNEYVPRGC KNKCHSHFHD ENSBTAP00000001322/1-747 DSQEPSHFDS QQPAILEEEE VMIAHAHPQE VYNEYVPRGC KNKCHSHFHD ENSTTRP00000006710/1-733 DSQEPSHFDS QQPAILEEEE VMIAHAHPQE VYNEYVPRGC KNKCHSHFHD bmy_11345T0/1-699 DSQEPSHFDS QQPAILEEEE VMIAHAHPQE VYNEYVPRGC KNKCHSHFHD BACU001597/1-728 DSQEPSHFDS QQPAILEEEE VMIAHAHPQE VYNEYVPRGC KNKCHSHFHD 551 600 ENSP00000269187/1-755 TLGQSDDLIH HHHDYHHILH HHHHQNHHPH SHSQRYSREE LKDAGVATLA ENSBTAP00000001322/1-747 TLGQSDDLIH HHHDYHHILH HHHHQNHHPH SHSQRYSREE LKDAGIATLA ENSTTRP00000006710/1-733 TLGQSDDLVH HHHDYHHILH HHHHQNHHPH SHSQRYSREE LKDAGIATLA bmy_11345T0/1-699 TLGQSDDLVH HHHDYHHILH HHHHQNHHPH SHSQRYSREE LKDAGIATLA BACU001597/1-728 TLGQSDDLVH HHHDYHHILH HHHHQNHHPH SHSQRYSREE LKDAGIATLA 601 650 ENSP00000269187/1-755 WMVIMGDGLH NFSDGLAIGA AFTEGLSSGL STSVAVFCHE LPHELGDFAV ENSBTAP00000001322/1-747 WMVIMGDGLH NFSDGLAIGA AFTEGLSSGL STSVAVFCHE LPHELGDFAV ENSTTRP00000006710/1-733 WMVIMGDGLH NFSDGLAIGA AFTEGLSSGL STSVAVFCHE LPHELGDFAV bmy_11345T0/1-699 WMVIMGDGLH NFSDGLAIGA AFTEGLSSGL STSVAVFCHE LPHELGDFAV BACU001597/1-728 WMVIMGDGLH NFSDGLAIGA AFTEGLSSGL STSVAVFCHE LPHELGDFAV 651 700 ENSP00000269187/1-755 LLKAGMTVKQ AVLYNALSAM LAYLGMATGI FIGHYAENVS MWIFALTAGL ENSBTAP00000001322/1-747 LLKAGMTVKQ AVLYNALSAM LAYLGMATGI FIGHYAENVS MWIFALTAGL ENSTTRP00000006710/1-733 LLKAGMTVKQ AVLYNALSAM LAYLGMATGI FIGHYAENVS MWIFALTAGL bmy_11345T0/1-699 LLKAGMTVKQ AVLYNALSAM LAYLGMATGI FIGHYAENVS MWIFALTAGL BACU001597/1-728 LLKAGMTVKQ AVLYNALSAM LAYLGMATGI FIGHYAENVS MWIFALTAGL 701 750 ENSP00000269187/1-755 FMYVALVDMV PEMLHNDASD HGCSRWGYFF LQNAGMLLGF GIMLLISIFE ENSBTAP00000001322/1-747 FMYVALVDMV PEMLHNDASD HGCSRWGYFF LQNAGILLGF GIMLLISIFE ENSTTRP00000006710/1-733 FMYVALVDMV PEMLHNDASD HGCSRWGYFF LQNAGILLGF GIMLLISIFE bmy_11345T0/1-699 FMYVALVDMV PEMLHNDASD HGCSRWGYFF LQNAGILLGF GIMLLISIFE BACU001597/1-728 FMYVALVDMV PEMLHNDASD HGCSRWGYFF LQNAGILLGF GIMLLISIFE 751 800 ENSP00000269187/1-755 HKIVFRINF ENSBTAP00000001322/1-747 HKIVFRINF ENSTTRP00000006710/1-733 HKIVFRINF bmy_11345T0/1-699 HKIVFRINF BACU001597/1-728 HKIVFRINF