KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:13:56 2014 Check: 00 .. Name: ENSP00000398568/1-555 Len: 555 Check: 6254 Weight: 1.00 Name: ENSTTRP00000007201/1-555 Len: 555 Check: 4235 Weight: 1.00 Name: ENSBTAP00000001336/1-554 Len: 555 Check: 616 Weight: 1.00 Name: bmy_16723T0/1-555 Len: 555 Check: 4770 Weight: 1.00 Name: BACU001931/1-555 Len: 555 Check: 4950 Weight: 1.00 // 1 50 ENSP00000398568/1-555 MAARLLLLGI LLLLLPLPVP APCHTAARSE CKRSHKFVPG AWLAGEGVDV ENSTTRP00000007201/1-555 MASRALLPSV LLLLLPTPTP APCYTAARSE CRRNLKFVPG SWLAGEGVDV ENSBTAP00000001336/1-554 MAARVLLLGI -LLLLPTPAP APCYTAARSE CQRALKFVPG SWLAGEGVDV bmy_16723T0/1-555 MASRVLLPGI LLLLLPAPAP APCYTAARSE CRRNLKFVPG SWLAGEGVDV BACU001931/1-555 MASRVLLPGI LLLLLPAPAP APCYTAARSE CRRNLKFVPG SWLAGEGVDV 51 100 ENSP00000398568/1-555 TSLRRSGSFP VDTQRFLRPD GTCTLCENAL QEGTLQRLPL ALTNWRAQGS ENSTTRP00000007201/1-555 TSLRRSGSFP VDTQRFLRSD GTCTLCRNAL QQGAVQRLPL ALTDWRAQGS ENSBTAP00000001336/1-554 TSLQRSGSFP VDTQRFLRPD GTCTLCRNAL QKDVLQRLPL AITDWRAHGA bmy_16723T0/1-555 TSLRRSGSFP VDTQHFLRPD GTCTLCRNAL QQGALQRLPL ALTDWRAQGS BACU001931/1-555 TSLRRSGSFP VDTQHFLRPD GTCTLCRNAL QQGALQRLPL ALTDWRAQGS 101 150 ENSP00000398568/1-555 GCQRHVTRAK VSSTEAVARD AARSIRNDWK VGLDVTPKPT SNVHVSVAGS ENSTTRP00000007201/1-555 GCNRKVVKGE GRSTEEVAGA AANTIRNDWR VGLDVTPKPS INTRVTMAGS ENSBTAP00000001336/1-554 GCKRRVVKLE GRSTEDVAGE AANRIRNDWQ VGLDVSPKPN ANVRVTVAGS bmy_16723T0/1-555 GCNRKVVKDE GRSTEEVAGE AANSIRNDWQ VGLDVTPKPS SNVRVTVAGS BACU001931/1-555 GCNRKVVKDE GRSTEEVAGE AANSIRNDWQ VGLDVTPKPS SNVRVTVAGS 151 200 ENSP00000398568/1-555 HSQAANFAAQ KTHQDQYSFS TDTVECRFYS FHVVHTPPLH PDFKRALGDL ENSTTRP00000007201/1-555 HSQEANFAAQ KTHQDQYRFS LDSVECRFYX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000001336/1-554 HSEDANFAAQ KTHQDNYRFS MDLVECRFYS FHLVHTPPVH PEFKRALKTL bmy_16723T0/1-555 HSKAANFAAQ KTHQDQYRFS LDSVECRFYS FHLVHTPPLH PEFKRALKTL BACU001931/1-555 HSQAANFAAQ KTHQDQYRFS LDSVECRFYS FHLVHTPPLH PEFKRALKTL 201 250 ENSP00000398568/1-555 PHHFNASTQP AYLRLISNYG THFIRAVELG GRISALTALR TCELALEGLT ENSTTRP00000007201/1-555 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXLR TCELALEGLT ENSBTAP00000001336/1-554 PPHFNTSTKP DYHRLISSYG THFIRSMELG GRISALTALR TCELALEGLT bmy_16723T0/1-555 PPHFNISTEP DYRRLISSYG THFIRSMELG GRISALTALR TCELALEGLT BACU001931/1-555 PPHFNISTEP DYRRLISSYG THFIRSMELG GRVSALTALR TCELALEGLT 251 300 ENSP00000398568/1-555 DNEVEDCLTV EAQVNIGIHG SISAEAKACE EKKKKHKMTA SFHQTYRERH ENSTTRP00000007201/1-555 AQEVEDCLAV EAEVSIKSHT SASLAFKKCE EKKKQHKMGT SFHQAYRERC ENSBTAP00000001336/1-554 ASEVEDCLAV EAEVSISDRA SASPSFKACE EKKKNHKVGT SFHQAYRERH bmy_16723T0/1-555 AQEVEDCLAV EAEVNIRSHA SASSAFKECE EKKKQHKMGT SFHQAYRERC BACU001931/1-555 AQEVEDCLAV EAEVSIRSHA SASSAFKECE EKKKQHKMGT SFHQAYRERC 301 350 ENSP00000398568/1-555 SEVVGGHHTS INDLLFGIQA GPEQYSAWVN SLPGSPGLVD YTLEPLHVLL ENSTTRP00000007201/1-555 SEVVGGHHTS MHDLLFGNQA GPEQFSAWVA SLQDSPGLVD YTLEPLHMLL ENSBTAP00000001336/1-554 SNVDGGHHST MHDLLFGSQA GPEQFSAWVA SLQDSPGLVD YTLEPLHMLV bmy_16723T0/1-555 SEVVGGHHTS MHDLLFGNQA GPEQFSAWVA SLRDSPGLVD YTLEPLHLLL BACU001931/1-555 SEVVGGHHTS VHDLLFGNQA GPEQFSAWVA SLQDSPGLVD YTLEPLHLLL 351 400 ENSP00000398568/1-555 DSQDPRREAL RRALSQYLTD RARWRDCSRP CPPGRQKSPR DPCQCVCHGS ENSTTRP00000007201/1-555 DSQDPQREAL RQAVSKYVTD RARWRDCSRP CPPGQRKNPK DPCQCLCHGS ENSBTAP00000001336/1-554 ESQDPRREAL RQAVSKYVTD RARWRDCNRP CPPGQHKNPK NPCQCMCPGS bmy_16723T0/1-555 DSRDPRREAL RQAVSKYVTD RARWRDCSRP CPPGQRKNPK DPCQCMCHGS BACU001931/1-555 DSRDPRREAL RQAVSKYVTD RARWRDCSRP CPPGRRKNPK DPCQCLCHGS 401 450 ENSP00000398568/1-555 AVTTQDCCPR QRGLAQLEVT FIQAWGLWGD WFTATDAYVK LFFGGQELRT ENSTTRP00000007201/1-555 AAINQDCCPR KRGLARLEVM NFVATGLWGD LTTATDAYLK VFFGGQELRT ENSBTAP00000001336/1-554 AATTQDCCPR QKGLAHLEVM NFKASGLWGD WITATDAYLK VFFAGQEQRT bmy_16723T0/1-555 AATNQDCCPR KRGLAHLEVM NFLATGLWGD WTTATDAYLK VFFGGRELRT BACU001931/1-555 AATNQDCCPR KRGLAHLEVM NFLATGLWGD WTTATDAYLK VFFGGRELRT 451 500 ENSP00000398568/1-555 STVWDNNNPI WSVRLDFGDV LLATGGPLRL QVWDQDSGRD DDLLGTCDQA ENSTTRP00000007201/1-555 DTVQNNNHPR WMTRLDFGDV VLTTGGPLRV QVWDADYGWD DDLLGTCDQT ENSBTAP00000001336/1-554 ATVWNDNNPR WMTRLDFGDV LLATGGPLRV QVWDADFGWD DDLLGTCDRT bmy_16723T0/1-555 DTVWNDNHPR WMTQLDFGDV VLTTGGPLRV QVWDADSGWD DDLLGTCDQT BACU001931/1-555 DTVQNDNHPR WMTQLDFGDV VLTTGGPLRV QVWDADSGWD DDLLGTCDQT 501 550 ENSP00000398568/1-555 PKSGSHEVRC NLNHGHLKFR YHARCLPHLG GGTCLDYVPQ MLLGEPPGNR ENSTTRP00000007201/1-555 PKSGSHEVKC CLKHGHLRFS YHAKCLPHLA GGTCLEYAPQ GLLGEPPGNR ENSBTAP00000001336/1-554 PKSGSHEVSC PMDHGLLKFS YQVKCLPHLT GERCLQYAPQ GLLGNPPGNR bmy_16723T0/1-555 PKSGSHEVKC PLKHGHLRFS YHAKCLPHLA GGTCLEYAPQ GLLGEPPGNR BACU001931/1-555 PKSGSHEVKC HLKHGHLRFS YHAKCLPHLT GGTCLEYAPQ GLLGDPPGNR 551 600 ENSP00000398568/1-555 SGAVW ENSTTRP00000007201/1-555 SGPVW ENSBTAP00000001336/1-554 SGPVW bmy_16723T0/1-555 SGPVW BACU001931/1-555 SGPVW