KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:14:01 2014 Check: 00 .. Name: ENSBTAP00000001355/1-409 Len: 485 Check: 5505 Weight: 1.00 Name: ENSTTRP00000007795/1-436 Len: 485 Check: 4832 Weight: 1.00 Name: bmy_02728T0/1-458 Len: 485 Check: 7914 Weight: 1.00 Name: BACU009197/1-409 Len: 485 Check: 6270 Weight: 1.00 // 1 50 ENSBTAP00000001355/1-409 ---------- ---------- ---------- ---------- ---------M ENSTTRP00000007795/1-436 ---------- ---------- ---------- ---------- ---------M bmy_02728T0/1-458 RCVTVDCAGH VGARITWARL SQLRVTCVRP SSRPELGAES GASRSVGLRM BACU009197/1-409 ---------- ---------- ---------- ---------- ---------M 51 100 ENSBTAP00000001355/1-409 RGGQGAARAP VIQFTNCRIL RGGALLREDL WVRGGRILDP EKLFFEERRV ENSTTRP00000007795/1-436 RGGQGAARAP VIQFTNCRIL RGRALLREDL WVRGGRILDP EKLFFEERRV bmy_02728T0/1-458 RGGQGAARAP VIQFTNCRIL RGRALLREDL WVRGGSILDP EKLFFEERRV BACU009197/1-409 RGGQGAARAP VIQFTNCRIL RGRALLREDL WVRGGSILDP EKLFFEERRV 101 150 ENSBTAP00000001355/1-409 ADEQRDCGGC ILAPGFIDVQ INGGFGVDFS QASEDVGSGV ALVARRILSH ENSTTRP00000007795/1-436 ADEQRDCGGC ILAPGFIDVQ INGGFGVDFS QATEDVGSGV ALVARRILPH bmy_02728T0/1-458 ADEQRDCGGC ILAPGFIDVQ INGGFGVDFS QATEDVDSGV ALVARRILPH BACU009197/1-409 ADEQRDCGGC ILAPGFIDVQ INGGFGVDFS QATEDVGSGV ALVARRILPH 151 200 ENSBTAP00000001355/1-409 GVTSFCPTLV TSPLEVYHKV LPQIPVKSGG PHGAGVLGVH LEGPFISREK ENSTTRP00000007795/1-436 GVTSFCPTLV TSPPEVYCKV LPQIPVKSGG PHGAGVLGVH LEGPFISHEK bmy_02728T0/1-458 GVTSFCPTLV TSPPEVYRKV LPQIPVKSGG PHGAGVLGVH LEGPFISREK BACU009197/1-409 GVTSFCPTLV TSPPEVYRKV LPQIPVKSGG PHGAGVLGVH LEGPFISREK 201 250 ENSBTAP00000001355/1-409 RGAHPEAHLR SFEADAFQDV LATYGGLDNV RIVTLAPELG HSQEVIRALT ENSTTRP00000007795/1-436 RGAHPEAHLR SFEANAFQDL LATYGGLDNV RIVTLAPELG RSHEVIRALT bmy_02728T0/1-458 RGAHPEAHLR SFEANAFQDL LAIYGGLDNV RIVTLAPELG RSHEVIRALT BACU009197/1-409 RGAHPEAHLR SFEANAFQDL LAIYGGLDNV RIVTLAPELG RSHEVIRALT 251 300 ENSBTAP00000001355/1-409 ALGICVSLGH SVADLGTAEE AVQSGATFIT HLFNAMLPFH HRDPGIVGLL ENSTTRP00000007795/1-436 ALGICVSLGH SVADLGTAEE AVQSGATFIT HLFNAMLPFH HRDPGIVGLL bmy_02728T0/1-458 ALGICVSLGH SVADLGTAEE AVQSGATFIT HLFNAMLPFH HRDPGIVGLL BACU009197/1-409 ALGICVSLGH SVADLGTAEE AVQSGATFIT HLFNAMLPFH HRDPGIVGLL 301 350 ENSBTAP00000001355/1-409 TSDRLPAGRH IFYGMIADGI HTNPAALRIA HRAHPKGLVL VTDAVPALGL ENSTTRP00000007795/1-436 TSDRLPLGRH IFYGMIADGI HTNPAALRIA HRAHPEGLVL VTDAVPALGL bmy_02728T0/1-458 TSDRLPLGRR IFYGMIADGI HTNPAALRIA HRAHPEGLVL VTDAVPALGL BACU009197/1-409 TSDRLPLGRH IFYGMIADGI HTNPAALRIA HRAHPEGLVL VTDAVPALGL 351 400 ENSBTAP00000001355/1-409 GNGRHTLGQQ EVEVDGLTAY VA-------- ---------- ---------G ENSTTRP00000007795/1-436 GNGRHTLGQQ EVEVDGLTAY VAGEPDPLGP GWPVCLALGL PRTCPFCSQG bmy_02728T0/1-458 GNGRHTLGQQ EVEVDGLTAY VA-------- ---------- ---------G BACU009197/1-409 GNGRHTLGQQ EVEVDGLTAY VA-------- ---------- ---------G 401 450 ENSBTAP00000001355/1-409 TNTLSGSIAP MDTCVRHFLQ ATGCSVESAL EAASLHPAQL LGLEKRKGTL ENSTTRP00000007795/1-436 TNTLSGSIAP MDTCVRHFLQ ATGCSVESAL EAASLHPAQL LGLEKHKGTL bmy_02728T0/1-458 TNTLSGSIAP MDTCVRHFLQ ATGCSVESAL EAASLHPAQL LGLEKHKGTL BACU009197/1-409 TNTLSGSIAP MDTCVRHFLQ ATGCSVESAL EAASLHPAQL LGLEKHNGTL 451 500 ENSBTAP00000001355/1-409 DFGADADFVV LDDSLHVRAT YISGELVWQV EEARP ENSTTRP00000007795/1-436 DFGADADFVV LDDSLHVRAT YISGELVWQA EEARQ bmy_02728T0/1-458 DFGADADFVV LDDSLHVRAT YISGELVWQA EEARQ BACU009197/1-409 DFGADADFVV LDDSLHVRAT YISGELVWQA EEARQ