KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:07 2014 Check: 00 .. Name: ENSTTRP00000008366/1-665 Len: 864 Check: 3890 Weight: 1.00 Name: bmy_10184T0/1-597 Len: 864 Check: 7098 Weight: 1.00 Name: BACU005323/1-749 Len: 864 Check: 7780 Weight: 1.00 Name: ENSP00000338864/1-609 Len: 864 Check: 9489 Weight: 1.00 Name: ENSBTAP00000001368/1-608 Len: 864 Check: 4374 Weight: 1.00 // 1 50 ENSTTRP00000008366/1-665 GCRCCGRGTP GWPGCSEQQG RKPAAPTGLH SGVELGVRSE PRRLSERSLP bmy_10184T0/1-597 ---------- ---------- ---------- ---------- ---------- BACU005323/1-749 ---------- ---------- ---------- ---------- ---------- ENSP00000338864/1-609 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001368/1-608 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008366/1-665 AYAPQAMAGT LDLDKGCTVE ELLRGCIEAF DDSGKVRDPQ LVRMFLMMHP bmy_10184T0/1-597 ------VAAA ---DYSAPAQ Q--------- --GACLPRPI SVRG------ BACU005323/1-749 ------MAGT LDLDKGCTVE ELLRGCIEAF ELGPCPPQTP PLELLLEPGP ENSP00000338864/1-609 ------MAGT LDLDKGCTVE ELLRGCIEAF DDSGKVRDPQ LVRMFLMMHP ENSBTAP00000001368/1-608 ------MAGT LDLDKGCTVE ELLRGCIEAF DDSGKVRDPQ LVRMFLMMHP 101 150 ENSTTRP00000008366/1-665 WYIPSSQLAA KLLYVYQQSR KDDSSSLQVK TCHLVRYWIS AFPAEFDLNP bmy_10184T0/1-597 ---------- ---------- ---------- ---------A APPARASADS BACU005323/1-749 ALSLPQELGS HPLPPF---- ---------- ----LEYWIS AFPAEFDLNP ENSP00000338864/1-609 WYIPSSQLAA KLLHIYQQSR KDNSNSLQVK TCHLVRYWIS AFPAEFDLNP ENSBTAP00000001368/1-608 WYIPSSQLAA KLLHIYQQSR KDNSSSLQVK TCHLVRYWIS AFPAEFDLNP 151 200 ENSTTRP00000008366/1-665 ELAEQIKELK ALLDQEGNRR HSSLINIESV PT-------- ---------- bmy_10184T0/1-597 RSASPRTGVR S--EPRGGSR SAAW---PSL PA-------- ---------- BACU005323/1-749 ELAEQIKELK ALLDQEGNRR HSSLIDIESV PTYKWNRQVT QRNPVEQKKR ENSP00000338864/1-609 ELAEQIKELK ALLDQEGNRR HSSLIDIDSV PT-------- ---------- ENSBTAP00000001368/1-608 ELAEQIKELK ALLDQEGNRR HSSLIDIENV PT-------- ---------- 201 250 ENSTTRP00000008366/1-665 ---------- ---------- ---------- ---------- ---------- bmy_10184T0/1-597 ---------- PEAMAGTLD- ---------- -------LDK GCTV------ BACU005323/1-749 KMSLLFDHLD PMELAAHLTY LEYCSFCKIL FQDYHSFVTH GCTVDNPVLE ENSP00000338864/1-609 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001368/1-608 ---------- ---------- ---------- ---------- ---------- 251 300 ENSTTRP00000008366/1-665 ---------- ---------- ---------- ---------- ---------- bmy_10184T0/1-597 ---------- ---------- ---------- -------EEL LR-------- BACU005323/1-749 RFISLFNSVS QWVQLMILSK PTAPQRALVI THFVHVAEKL LELQNFNTLM ENSP00000338864/1-609 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001368/1-608 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000008366/1-665 ---------- ---------- ---------- ---------- -YKWNRQVTQ bmy_10184T0/1-597 ---------- ---------- ---GCIEAFG LTAPPYSPSP TYKWNRQVTQ BACU005323/1-749 AVVGGLSHSS ISRLKETHSH VSPETIKVLG TRGVRGTACP TYKWNRQVTQ ENSP00000338864/1-609 ---------- ---------- ---------- ---------- -YKWKRQVTQ ENSBTAP00000001368/1-608 ---------- ---------- ---------- ---------- -YKWKRQVTQ 351 400 ENSTTRP00000008366/1-665 RNPVEQKKRK MSLLFDHLDP MELAAHLTYL EYCSFCKILF QDYHSFVTHG bmy_10184T0/1-597 RNPVEQKKRK MSLLFDHLDP MELAAHLTYL EYCSFCKILF QDYHSFVTHG BACU005323/1-749 RNPVEQKKRK MSLLFDHLDP MELAAHLTYL EYCSFCKILF QDYHSFVTHG ENSP00000338864/1-609 RNPVGQKKRK MSLLFDHLEP MELAEHLTYL EYRSFCKILF QDYHSFVTHG ENSBTAP00000001368/1-608 RNPVEQKKRK MSLLFDHLEP LELAAHLTYL EYRSFCKILF QDYHSFVTHG 401 450 ENSTTRP00000008366/1-665 CTVDNPVLER FISLFNSVSQ WVQLMILSKP TAPQRALVIT HFVHVAEKLL bmy_10184T0/1-597 CTVDNPVLER FISLFNSVSQ WVQLMILSKP TAPQRALVIT HFVHVAEKLL BACU005323/1-749 CTVDNPVLER FISLFNSVSQ WVQLMILSKP TAPQRALVIT HFVHVAEKLL ENSP00000338864/1-609 CTVDNPVLER FISLFNSVSQ WVQLMILSKP TAPQRALVIT HFVHVAEKLL ENSBTAP00000001368/1-608 CTVDNPVLER FISLFNSVSQ WVQLMILSKP TALQRAGVIT HFVHVAEELL 451 500 ENSTTRP00000008366/1-665 ELQNFNTLMA VVGGLSHSSI SRLKETHSHV SPETIKLWEG LTELVTATGN bmy_10184T0/1-597 ELQNFNTLMA VVGGLSHSSI SRLKETHSHV SPETIKLWEG LTELVTATGN BACU005323/1-749 ELQNFNTLMA VVGGLSHSSI SRLKETHSHV SPETIKLWEG LTELVTATGN ENSP00000338864/1-609 QLQNFNTLMA VVGGLSHSSI SRLKETHSHV SPETIKLWEG LTELVTATGN ENSBTAP00000001368/1-608 HLQNFNTLMA VVGGLSHSSI SRLKETHSHV SPETIKLWEG LTELVTATGN 501 550 ENSTTRP00000008366/1-665 YGNYRRRLAA CVGFRFPILG VHLKDLVALQ LALPDWLDPT RTRLNGAKMK bmy_10184T0/1-597 YGNYRRRLAA CVGFRFPILG VHLKDLVALQ LALPDWLDPT RTRLNGAKMK BACU005323/1-749 YGNYRRRLAA CVGFRFPILG VHLKDLVALQ LALPDWLDPT RTRLNGAKMK ENSP00000338864/1-609 YGNYRRRLAA CVGFRFPILG VHLKDLVALQ LALPDWLDPA RTRLNGAKMK ENSBTAP00000001368/1-608 YGNYRRRLAA CVGFRFPILG VHLKDLVALQ LALPDWLDPA RTRLNGAKMK 551 600 ENSTTRP00000008366/1-665 QLFSILEELA MVTSLQPPVQ ANPDLLSLLT VSLDQYQTED ELYQLSLQRE bmy_10184T0/1-597 QLFSILEELA MVTSLQPPVQ ANPDLLSLLT -----YQTED ELYQLSLQRE BACU005323/1-749 QLFSILEELA MVTSLQPPVQ ANPDLLSLLT VSLDQYQTED ELYQLSLQRE ENSP00000338864/1-609 QLFSILEELA MVTSLRPPVQ ANPDLLSLLT VSLDQYQTED ELYQLSLQRE ENSBTAP00000001368/1-608 QLFSILEELA MVTSLRPPVQ ANPDLLSLLM VSLDQYQTED ELYQLSLQRE 601 650 ENSTTRP00000008366/1-665 PRSKSSPTSP TSCTPPPRPP VLEEWTSAAK PKLDQALMVE HIEKMVESVF bmy_10184T0/1-597 PRSKSSPTSP TSCMPPPRPP VLEEWTSAAK PKLDQALMVE HIEKMVESVF BACU005323/1-749 PRSKSSPTSP TSCTPPPRPP VLEEWTSAAK PKLDQALMVE HIEKMVESVF ENSP00000338864/1-609 PRSKSSPTSP TSCTPPPRPP VLEEWTSAAK PKLDQALVVE HIEKMVESVF ENSBTAP00000001368/1-608 PRSKSSPTSP TTCTPPPRPP VLEEWTSAAK PKLDQAIMVE HIEKMVESVF 651 700 ENSTTRP00000008366/1-665 RNFDVDGDGH ISQEEFQIIR GNFPYLSAFG DFDQNXXXXX XXXXXXXXXX bmy_10184T0/1-597 RNFDVDGDGH ISQEE----- ---------- ------DGCI SKEEMVSYFL BACU005323/1-749 RNFDVDGDGH ISQEEFQIIR GNFPYLSAFG DLDQNQDGCI SKEEMVSYFL ENSP00000338864/1-609 RNFDVDGDGH ISQEEFQIIR GNFPYLSAFG DLDQNQDGCI SREEMVSYFL ENSBTAP00000001368/1-608 RNFDVDGDGH ISQEEFQIIR GNFPYLSAFG DLDQNQDGCI SKEEMVSYFL 701 750 ENSTTRP00000008366/1-665 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10184T0/1-597 RSSSVLGGRM GFVHNFHESN SLRPVACRHC KALILGIYKQ GLKCRACGVN BACU005323/1-749 RSSSVLGGRM GFVHNFHESN SLRPVTCRHC KALILGIYKQ GLKCRACGVN ENSP00000338864/1-609 RSSSVLGGRM GFVHNFQESN SLRPVACRHC KALILGIYKQ GLKCRACGVN ENSBTAP00000001368/1-608 RSSSMLGGRM GFVHNFHESN SLRPVACRHC KALILGIYKQ GLKCRACGVN 751 800 ENSTTRP00000008366/1-665 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_10184T0/1-597 CHKQCKDRLS VECRRRAQSV SLEGSAPSPS PTHTHH-RAF SFSLPRPGRR BACU005323/1-749 CHKQCKDRLS VECRRRAQSV SLEGSAPSPS PTHTHH-RAF SFSLPRPGRR ENSP00000338864/1-609 CHKQCKDRLS VECRRRAQSV SLEGSAPSPS PMHSHHHRAF SFSLPRPGRR ENSBTAP00000001368/1-608 CHKQCKDRLS VECRRRAQSM SLEGSAPSPS PTHTHH-RAF SFSLPRPGRR 801 850 ENSTTRP00000008366/1-665 XXXXXXXXXX XXXXXXXXXX XXHL------ ---------- ---------- bmy_10184T0/1-597 GSRPPEIREE DVQMVEDGVF DIHFCDWIKH SCLLWRKDLD QSREPGVLRQ BACU005323/1-749 GSRPPEIREE DVQMVEDGVF DIHL------ ---------- ---------- ENSP00000338864/1-609 GSRPPEIREE EVQTVEDGVF DIHL------ ---------- ---------- ENSBTAP00000001368/1-608 GSRPPEIREE EVQTVEDGVF DIHL------ ---------- ---------- 851 900 ENSTTRP00000008366/1-665 ---------- ---- bmy_10184T0/1-597 QAGAGGRGVR VACG BACU005323/1-749 ---------- ---- ENSP00000338864/1-609 ---------- ---- ENSBTAP00000001368/1-608 ---------- ----