KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:08 2014 Check: 00 .. Name: ENSP00000164139/1-842 Len: 928 Check: 6897 Weight: 1.00 Name: ENSTTRP00000008385/1-842 Len: 928 Check: 5771 Weight: 1.00 Name: ENSBTAP00000001373/1-842 Len: 928 Check: 8520 Weight: 1.00 Name: bmy_10185T0/1-841 Len: 928 Check: 2827 Weight: 1.00 Name: BACU005322/1-842 Len: 928 Check: 7327 Weight: 1.00 // 1 50 ENSP00000164139/1-842 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008385/1-842 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001373/1-842 ---------- ---------- ---------- ---------- ---------- bmy_10185T0/1-841 VGQRRAANEP GWPSLSLPEL DPALPAPPLL PSPQNSSPSG QAKTLPSREE BACU005322/1-842 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000164139/1-842 ---------- ---------- ---------- ------MSRP LSDQEKRKQI ENSTTRP00000008385/1-842 ---------- ---------- ---------- ------MSRP LTDQERRKQI ENSBTAP00000001373/1-842 ---------- ---------- ---------- ------MSRP LTDQEKRKQI bmy_10185T0/1-841 AGHVAQSQAL KHQPAGDLHS GRPPVHTVSP ARPPAAMSRP LTDQEKRKQI BACU005322/1-842 ---------- ---------- ---------- ------MSRP LTDQEKRKQI 101 150 ENSP00000164139/1-842 SVRGLAGVEN VTELKKNFNR HLHFTLVKDR NVATPRDYYF ALAHTVRDHL ENSTTRP00000008385/1-842 SVRGLAGVEN VTELKKIFNR HLHFTLVKDR NVATPLDYYF ALAYTVRDHL ENSBTAP00000001373/1-842 SVRGLAGVEN VTELKKNFNR HLHFTLVKDR NVATPRDYYF ALAYTVRDHL bmy_10185T0/1-841 SVRGLAGVEN VTELKKNFNR HLHFTLVKDR NVATPRDYYF ALAYTVRDHL BACU005322/1-842 SVRGLAGVEN VTELKKNFNR HLHFTLVKDR NVATPRDYYF ALAYTVRDHL 151 200 ENSP00000164139/1-842 VGRWIRTQQH YYEKDPKRIY YLSLEFYMGR TLQNTMVNLA LENACDEATY ENSTTRP00000008385/1-842 VGRWLRTQQH YYEKDPERIY YLSLEFYMGR TLQNTMVNLA LENACDEATY ENSBTAP00000001373/1-842 VGRWIRTQQH YYEKDPKRIY YLSLEFYIGR TLQNTMVNLA LENACDEATY bmy_10185T0/1-841 VGRWIRTQQH YYEKDPKRIY YLSLEFYMGR TLQNTMVNLA LENACDEATY BACU005322/1-842 VGRWIRTQQH YYEKDPKRIY YLSLEFYMGR TLQNTMVNLA LENACDEATY 201 250 ENSP00000164139/1-842 QLGLDMEELE EIEEDAGLGN GGLGRLAACF LDSMATLGLA AYGYGIRYEF ENSTTRP00000008385/1-842 QLGLDMEELE EVEEDAGLGN GGLGRLAACF LDSMATLGLA AYGYGIRYEF ENSBTAP00000001373/1-842 QLGLDMEELE EIEEDAGLGN GGLGRLAACF LDSMATLGLA AYGYGIRYEF bmy_10185T0/1-841 QLGLDMEELE EIEEDAGLGN GGLGRLAACF LDSMATLGLA AYGYGMRYEF BACU005322/1-842 QLGLDMEELE EIEEDAGLGN GGLGRLAACF LDSMATLGLA AYGYGIRYEF 251 300 ENSP00000164139/1-842 GIFNQKISGG WQMEEADDWL RYGNPWEKAR PEFTLPVHFY GHVEHTSQGA ENSTTRP00000008385/1-842 GIFNQKISGG WQMEEADDWL RYGNPWEKAR PECTLPVHFY GRVEHTNQGA ENSBTAP00000001373/1-842 GIFNQKISGG WQMEEADDWL RYGNPWEKAR PEFTLPVHFY GRVEHTSQGA bmy_10185T0/1-841 GIFNQKISGG WQMEEADDWL RYGNPWEKAR PEFTLPVHFY GRVEHTSQGA BACU005322/1-842 GIFNQKISGG WQMEEADDWL RYGNPWEKAR PEFTLPVHFY GRVEHTDQGA 301 350 ENSP00000164139/1-842 KWVDTQVVLA MPYDTPVPGY RNNVVNTMRL WSAKAPNDFN LKDFNVGGYI ENSTTRP00000008385/1-842 KWVDTQVVLA MPYDTPVPGY RNNIVNTMRL WSAKAPNDFN LKDFNVGGYI ENSBTAP00000001373/1-842 KWVDTQVVLA MPYDTPVPGY RNNVVNTMRL WSAKAPNDFN LKDFNVGGYI bmy_10185T0/1-841 KWVDTQVVLA MPYDTPVPGY RNNVVNTMRL WSAKAPNDFN LKDFNVGGYI BACU005322/1-842 KWVDTQVVLA MPYDTPVPGY RNNVVNTMRL WSAKAPNDFN LKDFNVGGYI 351 400 ENSP00000164139/1-842 QAVLDRNLAE NISRVLYPND NFFEGKELRL KQEYFVVAAT LQDIIRRFKS ENSTTRP00000008385/1-842 QAVLDRNLAE NISRVLYPND NFFEGKELRL KQEYFVVAAT LQDIIRRFKS ENSBTAP00000001373/1-842 QAVLDRNLAE NISRVLYPND NFFEGKELRL KQEYFVVAAT LQDIIRRFKS bmy_10185T0/1-841 QAVLDRNLAE NISRVLYPND NFFEGKELRL KQEYFVVAAT LQDIIRRFKS BACU005322/1-842 QAVLDRNLAE NISRVLYPND NFFEGKELRL KQEYFVVAAT LQDIIRRFKS 401 450 ENSP00000164139/1-842 SKFGCRDPVR TNFDAFPDKV AIQLNDTHPS LAIPELMRIL VDLERMDWDK ENSTTRP00000008385/1-842 AKFGCRDPVR TSFDAFPDKV AIQLNDTHPS LAIPELMRIL VDQERLDWDK ENSBTAP00000001373/1-842 SKFGCLDPVR TNFDAFPDKV AIQLNDTHPS LAIPELMRIL VDQERLEWEK bmy_10185T0/1-841 SKFGCQDPVR TSFDTFPDKV AIQLNDTHPS LAIPELMRIL VDQERLDWDK BACU005322/1-842 SKFGCQDPVR TSFDAFPDKV AIQLNDTHPS LAIPELMRIL VDQERLDWDK 451 500 ENSP00000164139/1-842 AWDVTVRTCA YTNHTVLPEA LERWPVHLLE TLLPRHLQII YEINQRFLNR ENSTTRP00000008385/1-842 AWDVTVKTCA YTNHTVLPEA LERWPVHLLE TLLPRHLQII YEINQRFLNR ENSBTAP00000001373/1-842 AWEVTVKTCA YTNHTVLPEA LERWPVHLIE TLLPRHLQII YEINQRFLNR bmy_10185T0/1-841 AWDVTVKTCA YTNHTVLPEA LERWPVHLIE TLLPRHLQII YEINQRFLSR BACU005322/1-842 AWDVTVKTCA YTNHTVLPEA LERWPVHLIE TLLPRHLQII YEINQRFLNR 501 550 ENSP00000164139/1-842 VAAAFPGDVD RLRRMSLVEE GAVKRINMAH LCIAGSHAVN GVARIHSEIL ENSTTRP00000008385/1-842 VAAAFPGDID RLRRMSLVEE GAVKRINMAH LCIAGSHAIN GVARIHSEIL ENSBTAP00000001373/1-842 VAAAFPGDVD RLRRMSLVEE GAVKRINMAH LCIAGSHAVN GVARIHSEIL bmy_10185T0/1-841 VAAAFPGDID RLRRMSLVEE GAVKRINMAH LCIAGSHAVN GVARIHSEIL BACU005322/1-842 VAAAFPGDID RLRRMSLVEE GAVKRINMAH LCIAGSHAVN GVARIHSEIL 551 600 ENSP00000164139/1-842 KKTIFKDFYE LEPHKFQNKT NGITPRRWLV LCNPGLAEVI AERIGEDFIS ENSTTRP00000008385/1-842 KKTTFKDFYE LEPHKFQNKT NGITPRRWLV MCNPGLAEVI AERIGEDYIA ENSBTAP00000001373/1-842 KKTIFKDFYE LEPHKFQNKT NGITPRRWLV MCNPGLAEII AERIGEEYIA bmy_10185T0/1-841 KKTTFKDFYE LEPHKFQNKT NGITPRRWLV MCNPGLAEVI AERIGEDYIA BACU005322/1-842 KKTTFKDFYE LEPHKFQNKT NGITPRRWLV MCNPGLAEVI AERIGEDYIA 601 650 ENSP00000164139/1-842 DLDQLRKLLS FVDDEAFIRD VAKVKQENKL KFAAYLEREY KVHINPNSLF ENSTTRP00000008385/1-842 DLDQLRKLLS YVDDEAFIRD VAKVKQENKL KFSAYLEKEY KVHINPNSLF ENSBTAP00000001373/1-842 DLDQLRKLLS YVDDESFIRD VAKVKQENKL KFSAYLEKEY KVHINPNSLF bmy_10185T0/1-841 DLDQLRKVLS YVDDEAFIRD VAKVKQENKL KFSAYLEKEY KVHINPNSLF BACU005322/1-842 DLDQLRKVLS YVDDEAFIRD VAKVKQENKL KFSAYLEKEY KVHINPNSLF 651 700 ENSP00000164139/1-842 DIQVKRIHEY KRQLLNCLHV ITLYNRIKRE PNKFFVPRTV MIGGKAAPGY ENSTTRP00000008385/1-842 DVQVKRIHEY KRQLLNCLHV ITMYNRIKKD PNKFFVPRTV MIGGKAAPGY ENSBTAP00000001373/1-842 DIQVKRIHEY KRQLLNCLHV ITLYNRIKKE PNKFFVPRTV MIGGKAAPGY bmy_10185T0/1-841 DIQ------- ---------- ---------- ---------- -----AAPGY BACU005322/1-842 DIQVKRIHEY KRQLLNCLHI ITMYNRIKKD PNKFFVPRTV IIGGKAAPGY 701 750 ENSP00000164139/1-842 HMAKMIIRLV TAIGDVVNHD PAVGDRLRVI FLENYRVSLA EKVIPAADLS ENSTTRP00000008385/1-842 HMAKMIIKLI TAIGDVVNHD PVVGDRLRLI FLENYRVSLA EKVIPAADLS ENSBTAP00000001373/1-842 HMAKMIIKLI TAIGDVVNHD PVVGDRLRVI FLENYRVSLA EKVIPAADLS bmy_10185T0/1-841 HMAKMIIKLI TAIGDVVNHD PVVGDRLRVI FLENYRVSLA EKVIPAADLS BACU005322/1-842 HMAKMIIKLI TAIGDVVNHD PAVGDRLRVI FLENYRVSLA EKVIPAADLS 751 800 ENSP00000164139/1-842 EQISTAGTEA SGTGNMKFML NGALTIGTMD GANVEMAEEA GEENFFIFGM ENSTTRP00000008385/1-842 EQISTAGTEA SGTGNMKFML NGALTIGTMD GANVEMAEEA GEENFFIFGM ENSBTAP00000001373/1-842 EQISTAGTEA SGTGNMKFML NGALTIGTMD GANVEMAEEA GEENFFIFGM bmy_10185T0/1-841 EQISTAGTEA SGTGNMKFML NGALTIGTMD GANVEMAEEA GEENIFIFGM BACU005322/1-842 EQISTAGTEA SGTGNMKFML NGALTIGTMD GANVEMAEEA GEENIFIFGM 801 850 ENSP00000164139/1-842 RVEDVDKLDQ RGYNAQEYYD RIPELRQVIE QLSSGFFSPK QPDLFKDIVN ENSTTRP00000008385/1-842 RVEDVERLDQ KGYNAQEYCD RIPELRHIID QLNSGFFSPK QPDLFKDIVN ENSBTAP00000001373/1-842 RVEDVERLDQ KGYNAQEYYD RIPELRHVID QLSSGFFSPK QPDLFKDIVN bmy_10185T0/1-841 RVEDVERLDQ RG-------- ---------- ---------- ---------- BACU005322/1-842 RVEDVERLDQ RGYNAQEYYD RIPELRHIID QLDSGFFSPK QPDLFKAIVN 851 900 ENSP00000164139/1-842 MLMHHDRFKV FADYEDYIKC QEKVSALYKN PREWTRMVIR NIATSGKFSS ENSTTRP00000008385/1-842 MLMHHDRFKV FADYEEYIKC QERVSALYKN PREWTRMVIR NIATSGKFSS ENSBTAP00000001373/1-842 MLMHHDRFKV FADYEEYVKC QERVSALYKN PREWTRMVIR NIATSGKFSS bmy_10185T0/1-841 -------FKV FADYEDYIKC QERVSALYKN PREWTRMVIR NIATSGKFSS BACU005322/1-842 MLMHHDRFKV FADYEDYIKC QERVSALYKN PREWTRMVIR NIATSGKFSS 901 950 ENSP00000164139/1-842 DRTIAQYARE IWGVEPSRQR LPAPDEAI ENSTTRP00000008385/1-842 DRTIAQYAKE IWGVEPSRQR LPAPDEKI ENSBTAP00000001373/1-842 DRTIAQYARE IWGVEPTRQR MPAPDEKI bmy_10185T0/1-841 DRTIAQYARE IWGVEPNRQR LPAPDEKI BACU005322/1-842 DRTIAQYARE IWGVEPNRQR LPAPDEKI