KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:09 2014 Check: 00 .. Name: BACU003780/1-361 Len: 370 Check: 6662 Weight: 1.00 Name: bmy_13016T0/1-331 Len: 370 Check: 6367 Weight: 1.00 Name: ENSTTRP00000014477/1-335 Len: 370 Check: 7415 Weight: 1.00 Name: ENSP00000265395/1-336 Len: 370 Check: 4420 Weight: 1.00 Name: ENSBTAP00000001374/1-336 Len: 370 Check: 5456 Weight: 1.00 // 1 50 BACU003780/1-361 MAASLRLRGA ASGLRYWSRR QQPAVASLAA VCSRSMASKT PVGFIGVGNM bmy_13016T0/1-331 MVASLRLRGA ASGLRYWSCR QQPAVASLAA VCSRSMASKT PVGFTGVGNM ENSTTRP00000014477/1-335 MAASLRLRGA ASGLRYWSRR QQPAVASLAA VCSRSMASKT PVGFIGVGNM ENSP00000265395/1-336 MAASLRLLGA ASGLRYWSRR LRPAAGSFAA VCSRSVASKT PVGFIGLGNM ENSBTAP00000001374/1-336 MAASLRLRGA ASGLRYWSRR QPPAVASLAA VCSRSMASKT PVGFIGVGNM 51 100 BACU003780/1-361 GNPMAKNLMK HGYPLIIYDV FPDACKEFLD AGEQVVSSPA DVAEKADRII bmy_13016T0/1-331 GNPMAKNLMK HGYPLIIYDV FPDACKEFLD AGEQVVSSPA DVAKKADRII ENSTTRP00000014477/1-335 GNPMAKNLMK HGYPLIIYDV FPDACKEFLD AGEQVVSSPA DVAEKADRII ENSP00000265395/1-336 GNPMAKNLMK HGYPLIIYDV FPDACKEFQD AGEQVVSSPA DVAEKADRII ENSBTAP00000001374/1-336 GNPMAKNLMK HGYPLIIYDV FPDACKEFLD AGEQVVSSPA DVAEKADRII 101 150 BACU003780/1-361 TMLPTSINAI EAYSGANGIL KKVKKGSLLI DSSTIDPMVS KELAKEVEKM bmy_13016T0/1-331 TMLPTSIDAI EAYSGANEIL KKVKKGSLLI DSSTVDPMVL NELAKEVEKM ENSTTRP00000014477/1-335 TMLPTSINAI EAYSGANGIL KKVKKGSLLI DSSTIDPMVS KELAKEVEKM ENSP00000265395/1-336 TMLPTSINAI EAYSGANGIL KKVKKGSLLI DSSTIDPAVS KELAKEVEKM ENSBTAP00000001374/1-336 TMLPTSINAI EAYSGANGIL KKVKKGSLLI DSSTIDPMVS KELAKEVEKM 151 200 BACU003780/1-361 GAVFMDAPVS GGVGAARSGN LTFMVGGVEE EF-AAAQELL GCMGSNVVHC bmy_13016T0/1-331 GAVFMDAPVS GGVGAARSGS LTFMVGGVAE EFAAAAQQLL GCVGSNVACC ENSTTRP00000014477/1-335 GAVFMDAPVS -GVGAARSGN LTFMVGGVEE EF-AAAQELL GCMGSNVVHC ENSP00000265395/1-336 GAVFMDAPVS GGVGAARSGN LTFMVGGVED EF-AAAQELL GCMGSNVVYC ENSBTAP00000001374/1-336 GAVFMDAPVS GGVGAARSGN LTFMVGGVEE EF-AAAQELL GCMGSNVVYC 201 250 BACU003780/1-361 GAVGTGQAAK ICNNLLLAIS MIGTAEAMNL GIRLGLDPKL LAKILNMSSG bmy_13016T0/1-331 GAAGTGQAAK ICNNLLLAIS MTGTAEAMHL GIRLGLDPKL LAKILNMSSG ENSTTRP00000014477/1-335 GAVGTGQXXX XXXXXXXXXX XXXXXXXXXX XXXLGLDPKL LAKILNMSSG ENSP00000265395/1-336 GAVGTGQAAK ICNNMLLAIS MIGTAEAMNL GIRLGLDPKL LAKILNMSSG ENSBTAP00000001374/1-336 GAVGTGQAAK ICNNLLLAIS MIGTAEAMNL GIRLGLDPKL LAKILNMSSG 251 300 BACU003780/1-361 RCWSSDTYNP VPGVMDGVPS ANNYQGGFGT TLMAKDLGLH KTLLPARRAQ bmy_13016T0/1-331 QCWSSDTYNP VAGVVDGAPS ANHYQGGFGT TLMAKDLGL- ---------- ENSTTRP00000014477/1-335 RCWSSDTYNP VPGVMDGVPS ANNYQGGFGT TLMAKDLGL- ---------- ENSP00000265395/1-336 RCWSSDTYNP VPGVMDGVPS ANNYQGGFGT TLMAKDLGL- ---------- ENSBTAP00000001374/1-336 RCWSSDTYNP VPGVMDGVPS ANNYQGGFGT TLMAKDLGL- ---------- 301 350 BACU003780/1-361 SFWAVRPIRS TGLCVRRATP KKTSHPCSSF YERRKHSEFA LWLWTLLGTK bmy_13016T0/1-331 ---------- -------AQD SAASTKSPVL PGRQAHQ--- --IYRMMCSR ENSTTRP00000014477/1-335 ---------- -------AQD SATSTKSPIL LGSQAHQ--- --IYRMMCAK ENSP00000265395/1-336 ---------- -------AQD SATSTKSPIL LGSLAHQ--- --IYRMMCAK ENSBTAP00000001374/1-336 ---------- -------AQD SATSTKSPIL LGSQAHQ--- --IYRMMCAK 351 400 BACU003780/1-361 LYLGASYSSL HK-------- bmy_13016T0/1-331 GYTPKDFSSI FQFL------ ENSTTRP00000014477/1-335 GYSKKDFSSV FQFLREEETF ENSP00000265395/1-336 GYSKKDFSSV FQFLREEETF ENSBTAP00000001374/1-336 GYSKKDFSSV FQFLREEETF