KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:14:09 2014 Check: 00 ..
Name: BACU005321/1-604 Len: 764 Check: 3438 Weight: 1.00
Name: bmy_10186T0/1-648 Len: 764 Check: 7848 Weight: 1.00
Name: ENSBTAP00000001376/1-639 Len: 764 Check: 8415 Weight: 1.00
Name: ENSP00000366604/1-673 Len: 764 Check: 8538 Weight: 1.00
Name: ENSTTRP00000008399/1-526 Len: 764 Check: 9800 Weight: 1.00
//
1 50
BACU005321/1-604 ---------- ---------- ---------- ---------- ----------
bmy_10186T0/1-648 MATGANATPL DPGPGPLLVA M--------- ---------- ----------
ENSBTAP00000001376/1-639 MATGANATPL D--------- ---------- ---------- ----------
ENSP00000366604/1-673 MATGANATPL GKLGPPGLPP LPGPKGGFEP GPPPAPGPGA GLLAPGPPPP
ENSTTRP00000008399/1-526 ---------- ---------- ---------- ---------- ----------
51 100
BACU005321/1-604 ---------- ---------- ---------- ---------- ----------
bmy_10186T0/1-648 ---------- ---------- ---------- ---------- ----------
ENSBTAP00000001376/1-639 ---------- ---------- ---------- ---------- ----------
ENSP00000366604/1-673 PPVGSMGALT AAFPFAALPP PPPPPPPPPP QQPPPPPPPP SPGASYPPPQ
ENSTTRP00000008399/1-526 ---------- ---------- ---------- ---------- ----------
101 150
BACU005321/1-604 ---------- ---------- ---------- ---------- ----------
bmy_10186T0/1-648 ---------- ---------- ---------- SLDFSDFPSK KRKRSRWNQD
ENSBTAP00000001376/1-639 ---------- ---------- ---------- ------FPSK KRKRSRWNQD
ENSP00000366604/1-673 PPPPPPLYQR VSPPQPPPPQ PPRKDQQPGP AGGGGDFPSK KRKRSRWNQD
ENSTTRP00000008399/1-526 ---------- ---------- ---------- ------FPSK KRKRSRWNQD
151 200
BACU005321/1-604 ---------- MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN
bmy_10186T0/1-648 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN
ENSBTAP00000001376/1-639 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN
ENSP00000366604/1-673 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN
ENSTTRP00000008399/1-526 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN
201 250
BACU005321/1-604 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP
bmy_10186T0/1-648 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP
ENSBTAP00000001376/1-639 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP
ENSP00000366604/1-673 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP
ENSTTRP00000008399/1-526 PEDRSL-PE- IYNSEG-RLN TRE---RTKL EKERY--LIE CMALTHDV--
251 300
BACU005321/1-604 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI
bmy_10186T0/1-648 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI
ENSBTAP00000001376/1-639 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI
ENSP00000366604/1-673 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI
ENSTTRP00000008399/1-526 -ADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI
301 350
BACU005321/1-604 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI
bmy_10186T0/1-648 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI
ENSBTAP00000001376/1-639 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI
ENSP00000366604/1-673 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI
ENSTTRP00000008399/1-526 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI
351 400
BACU005321/1-604 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN
bmy_10186T0/1-648 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN
ENSBTAP00000001376/1-639 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN
ENSP00000366604/1-673 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN
ENSTTRP00000008399/1-526 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN
401 450
BACU005321/1-604 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV
bmy_10186T0/1-648 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV
ENSBTAP00000001376/1-639 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV
ENSP00000366604/1-673 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV
ENSTTRP00000008399/1-526 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV
451 500
BACU005321/1-604 PASVGSTSGP ATTPLASAPR PAAPANNPPP PSLMSTTQSR PPWMNSGPSE
bmy_10186T0/1-648 PASVGSTSGP ATTPLASAPR PAAPANNPPP P-------SR PPWMNSGPSE
ENSBTAP00000001376/1-639 PASVGSTSGP ATTPLASAPR PAAPANNPPP PSLMSTTQSR PPWMNSGPSE
ENSP00000366604/1-673 PASVGSTSGP ATTPLASAPR PAAPANNPPP PSLMSTTQSR PPWMNSGPSE
ENSTTRP00000008399/1-526 PASVGSTSGP ATTPLASAPR PAAPASNPPP PSLMSTTQSR PPWMNSGPSE
501 550
BACU005321/1-604 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM
bmy_10186T0/1-648 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM
ENSBTAP00000001376/1-639 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM
ENSP00000366604/1-673 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM
ENSTTRP00000008399/1-526 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM
551 600
BACU005321/1-604 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM
bmy_10186T0/1-648 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM
ENSBTAP00000001376/1-639 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM
ENSP00000366604/1-673 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM
ENSTTRP00000008399/1-526 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM
601 650
BACU005321/1-604 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW
bmy_10186T0/1-648 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW
ENSBTAP00000001376/1-639 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW
ENSP00000366604/1-673 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW
ENSTTRP00000008399/1-526 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW
651 700
BACU005321/1-604 QQNTTTTTTS AGTGSIPPWQ QQQAAAAASP GAPQMQGNPT MVPLPPGVQP
bmy_10186T0/1-648 QQNTTTTTTS AGTGSIPPWQ QQQAAAAASP GAPQMQGNPT MVPLPPGVQP
ENSBTAP00000001376/1-639 QQNTTTTTTS AGTGSIPPWQ QQQAAAAASP GAPQMQGNPT MVPLPPGVQP
ENSP00000366604/1-673 QQRSLPAAAM ARAMRVRTFR AHW------- ---------- ----------
ENSTTRP00000008399/1-526 QQRSLPAAAM ARAMRVRTFR AHW------- ---------- ----------
701 750
BACU005321/1-604 PLPPGAPPPP PPPPPGSAGM MYAPPPPPPP PMDPSNFVTM MGMGVAGMPP
bmy_10186T0/1-648 PLPPGAPPPP PPPPPGSAGM MYAPPPPPPP PMDPSNFVTM MGMGVAGMPP
ENSBTAP00000001376/1-639 PLPPGAPPPP PPPPPGSAGM MYAPPPPPPP PMDPSNFVTM MGMGVAGMPP
ENSP00000366604/1-673 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000008399/1-526 ---------- ---------- ---------- ---------- ----------
751 800
BACU005321/1-604 FGMPPAPPPP PPQN
bmy_10186T0/1-648 FGMPPAPPPP PPQN
ENSBTAP00000001376/1-639 FGMPPAPPPP PPQN
ENSP00000366604/1-673 ---------- ----
ENSTTRP00000008399/1-526 ---------- ----