KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:09 2014 Check: 00 .. Name: BACU005321/1-604 Len: 764 Check: 3438 Weight: 1.00 Name: bmy_10186T0/1-648 Len: 764 Check: 7848 Weight: 1.00 Name: ENSBTAP00000001376/1-639 Len: 764 Check: 8415 Weight: 1.00 Name: ENSP00000366604/1-673 Len: 764 Check: 8538 Weight: 1.00 Name: ENSTTRP00000008399/1-526 Len: 764 Check: 9800 Weight: 1.00 // 1 50 BACU005321/1-604 ---------- ---------- ---------- ---------- ---------- bmy_10186T0/1-648 MATGANATPL DPGPGPLLVA M--------- ---------- ---------- ENSBTAP00000001376/1-639 MATGANATPL D--------- ---------- ---------- ---------- ENSP00000366604/1-673 MATGANATPL GKLGPPGLPP LPGPKGGFEP GPPPAPGPGA GLLAPGPPPP ENSTTRP00000008399/1-526 ---------- ---------- ---------- ---------- ---------- 51 100 BACU005321/1-604 ---------- ---------- ---------- ---------- ---------- bmy_10186T0/1-648 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001376/1-639 ---------- ---------- ---------- ---------- ---------- ENSP00000366604/1-673 PPVGSMGALT AAFPFAALPP PPPPPPPPPP QQPPPPPPPP SPGASYPPPQ ENSTTRP00000008399/1-526 ---------- ---------- ---------- ---------- ---------- 101 150 BACU005321/1-604 ---------- ---------- ---------- ---------- ---------- bmy_10186T0/1-648 ---------- ---------- ---------- SLDFSDFPSK KRKRSRWNQD ENSBTAP00000001376/1-639 ---------- ---------- ---------- ------FPSK KRKRSRWNQD ENSP00000366604/1-673 PPPPPPLYQR VSPPQPPPPQ PPRKDQQPGP AGGGGDFPSK KRKRSRWNQD ENSTTRP00000008399/1-526 ---------- ---------- ---------- ------FPSK KRKRSRWNQD 151 200 BACU005321/1-604 ---------- MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN bmy_10186T0/1-648 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN ENSBTAP00000001376/1-639 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN ENSP00000366604/1-673 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN ENSTTRP00000008399/1-526 TMEQKTVIPG MPTVIPPGLT REQERAYIVQ LQIEDLTRKL RTGDLGIPPN 201 250 BACU005321/1-604 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP bmy_10186T0/1-648 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP ENSBTAP00000001376/1-639 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP ENSP00000366604/1-673 PEDRSPSPEP IYNSEGKRLN TREFRTRKKL EEERHNLITE MVALNPDFKP ENSTTRP00000008399/1-526 PEDRSL-PE- IYNSEG-RLN TRE---RTKL EKERY--LIE CMALTHDV-- 251 300 BACU005321/1-604 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI bmy_10186T0/1-648 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI ENSBTAP00000001376/1-639 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI ENSP00000366604/1-673 PADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI ENSTTRP00000008399/1-526 -ADYKPPATR VSDKVMIPQD EYPEINFVGL LIGPRGNTLK NIEKECNAKI 301 350 BACU005321/1-604 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI bmy_10186T0/1-648 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI ENSBTAP00000001376/1-639 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI ENSP00000366604/1-673 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI ENSTTRP00000008399/1-526 MIRGKGSVKE GKVGRKDGQM LPGEDEPLHA LVTANTMENV KKAVEQIRNI 351 400 BACU005321/1-604 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN bmy_10186T0/1-648 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN ENSBTAP00000001376/1-639 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN ENSP00000366604/1-673 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN ENSTTRP00000008399/1-526 LKQGIETPED QNDLRKMQLR ELARLNGTLR EDDNRILRPW QSSETRSITN 401 450 BACU005321/1-604 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV bmy_10186T0/1-648 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV ENSBTAP00000001376/1-639 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV ENSP00000366604/1-673 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV ENSTTRP00000008399/1-526 TTVCTKCGGA GHIASDCKFQ RPGDPQSAQD KARMDKEYLS LMAELGEAPV 451 500 BACU005321/1-604 PASVGSTSGP ATTPLASAPR PAAPANNPPP PSLMSTTQSR PPWMNSGPSE bmy_10186T0/1-648 PASVGSTSGP ATTPLASAPR PAAPANNPPP P-------SR PPWMNSGPSE ENSBTAP00000001376/1-639 PASVGSTSGP ATTPLASAPR PAAPANNPPP PSLMSTTQSR PPWMNSGPSE ENSP00000366604/1-673 PASVGSTSGP ATTPLASAPR PAAPANNPPP PSLMSTTQSR PPWMNSGPSE ENSTTRP00000008399/1-526 PASVGSTSGP ATTPLASAPR PAAPASNPPP PSLMSTTQSR PPWMNSGPSE 501 550 BACU005321/1-604 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM bmy_10186T0/1-648 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM ENSBTAP00000001376/1-639 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM ENSP00000366604/1-673 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM ENSTTRP00000008399/1-526 SRPYHGMHGG GPGGPGGGPH SFPHPLPSLT GGHGGHPMQH NPNGPPPPWM 551 600 BACU005321/1-604 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM bmy_10186T0/1-648 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM ENSBTAP00000001376/1-639 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM ENSP00000366604/1-673 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM ENSTTRP00000008399/1-526 QPPPPPMNQG PHPPGHHGPP PMDQYLGSTP VGSGVYRLHQ GKGMMPPPPM 601 650 BACU005321/1-604 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW bmy_10186T0/1-648 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW ENSBTAP00000001376/1-639 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW ENSP00000366604/1-673 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW ENSTTRP00000008399/1-526 GMMPPPPPPP SGQPPPPPSG PLPPWQQQQQ QPPPPPPPSS SMASSTPLPW 651 700 BACU005321/1-604 QQNTTTTTTS AGTGSIPPWQ QQQAAAAASP GAPQMQGNPT MVPLPPGVQP bmy_10186T0/1-648 QQNTTTTTTS AGTGSIPPWQ QQQAAAAASP GAPQMQGNPT MVPLPPGVQP ENSBTAP00000001376/1-639 QQNTTTTTTS AGTGSIPPWQ QQQAAAAASP GAPQMQGNPT MVPLPPGVQP ENSP00000366604/1-673 QQRSLPAAAM ARAMRVRTFR AHW------- ---------- ---------- ENSTTRP00000008399/1-526 QQRSLPAAAM ARAMRVRTFR AHW------- ---------- ---------- 701 750 BACU005321/1-604 PLPPGAPPPP PPPPPGSAGM MYAPPPPPPP PMDPSNFVTM MGMGVAGMPP bmy_10186T0/1-648 PLPPGAPPPP PPPPPGSAGM MYAPPPPPPP PMDPSNFVTM MGMGVAGMPP ENSBTAP00000001376/1-639 PLPPGAPPPP PPPPPGSAGM MYAPPPPPPP PMDPSNFVTM MGMGVAGMPP ENSP00000366604/1-673 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008399/1-526 ---------- ---------- ---------- ---------- ---------- 751 800 BACU005321/1-604 FGMPPAPPPP PPQN bmy_10186T0/1-648 FGMPPAPPPP PPQN ENSBTAP00000001376/1-639 FGMPPAPPPP PPQN ENSP00000366604/1-673 ---------- ---- ENSTTRP00000008399/1-526 ---------- ----