KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:10 2014 Check: 00 .. Name: ENSTTRP00000008412/1-818 Len: 851 Check: 693 Weight: 1.00 Name: ENSP00000294066/1-820 Len: 851 Check: 5893 Weight: 1.00 Name: ENSBTAP00000001378/1-821 Len: 851 Check: 4310 Weight: 1.00 Name: bmy_10187T0/1-836 Len: 851 Check: 4650 Weight: 1.00 Name: BACU005320/1-805 Len: 851 Check: 8493 Weight: 1.00 // 1 50 ENSTTRP00000008412/1-818 MALLQDVSLQ DPRDRFELLQ RVGAGTYGDV YKARDTVTSE LAAVKIVKLD ENSP00000294066/1-820 MALLRDVSLQ DPRDRFELLQ RVGAGTYGDV YKARDTVTSE LAAVKIVKLD ENSBTAP00000001378/1-821 MALLQNVSLQ DPRDRFELLQ RVGAGTYGDV YKARDTVTSE LAAVKIVKLD bmy_10187T0/1-836 MALLQNVSLQ DPRDRFELLQ RVGAGTYGDV YKARDTVTSE LAAVKIVKLD BACU005320/1-805 MALLQNVSLQ DPRDRFELLQ RVGAGTYGDV YKARDTVTSE LAAVKIVKLD 51 100 ENSTTRP00000008412/1-818 PGDDISSLQQ EITILRECRH PNVVAYIGSY LRNDRLWICM EFCGGGSLQE ENSP00000294066/1-820 PGDDISSLQQ EITILRECRH PNVVAYIGSY LRNDRLWICM EFCGGGSLQE ENSBTAP00000001378/1-821 PGDDISSLQQ EITILRECRH PNVVAYIGSY LRNDRLWICM EFCGGGSLQE bmy_10187T0/1-836 PGDDISSLQQ EITILRECRH PNVVAYIGSY LRNDRLWICM EFCGGGSLQE BACU005320/1-805 PA-------X EITILRECRH PNVVAYIGSY LRNDRLWICM EFCGGGSLQE 101 150 ENSTTRP00000008412/1-818 IYHATGPLEE RQIAYVCREA LKGLHHLHSQ GKIHRDIKGA NLLLTLQGDV ENSP00000294066/1-820 IYHATGPLEE RQIAYVCREA LKGLHHLHSQ GKIHRDIKGA NLLLTLQGDV ENSBTAP00000001378/1-821 IYHATGPLEE RQIAYVCREA LKGLHHLHSQ GKIHRDIKGA NLLLTLQGDV bmy_10187T0/1-836 IYHATGPLEE RQIAYVCREA LKGLHHLHSQ GKIHRDIKGA NLLLTLQGDV BACU005320/1-805 IYHATGPLEE RQIAYVCREA LKGLHHLHSQ GKIHRDIKGA NLLLTLQGDV 151 200 ENSTTRP00000008412/1-818 KLADFGVSGE LTASVAKRRS FIGTPYWMAP EVAAVERKGG YNELCDIWAL ENSP00000294066/1-820 KLADFGVSGE LTASVAKRRS FIGTPYWMAP EVAAVERKGG YNELCDVWAL ENSBTAP00000001378/1-821 KLADFGVSGE LTASVAKRRS FIGTPYWMAP EVAAVERKGG YNELCDVWAL bmy_10187T0/1-836 KLADFGVSGE LTASVAKRRS FIGTPYWMAP EVAAVERKGG YNELCDIWAL BACU005320/1-805 KLADFGVSGE LTASVAKRRS FIGTPYWMAP EVAAVERKGG YNELCDIWAL 201 250 ENSTTRP00000008412/1-818 GITAIELGEL QPPLFHLHPM RALMLMSKSS FQPPKLRDKT RWTQYFHHFL ENSP00000294066/1-820 GITAIELGEL QPPLFHLHPM RALMLMSKSS FQPPKLRDKT RWTQNFHHFL ENSBTAP00000001378/1-821 GITAIELGEL QPPLFHLHPM RALMLMSKSS FQPPKLRDKT RWTQNFHHFL bmy_10187T0/1-836 GITAIELGEL QPPLFHLHPM RALMLMSKSS FQPPKLRDKT RWTQYFHHFL BACU005320/1-805 GITAIELGEL QPPLFHLHPM RALMLMSKSS FQPPKLRDKT RWTQYFHHFL 251 300 ENSTTRP00000008412/1-818 KLALTKNPKK RPTAEKLLQH PFTTQQLPRA LLTQLLDKAN DPHLGTPSPE ENSP00000294066/1-820 KLALTKNPKK RPTAEKLLQH PFTTQQLPRA LLTQLLDKAS DPHLGTPSPE ENSBTAP00000001378/1-821 KLALTKNPKK RPTAERLLQH PFTTQHLPRA LLTQLLDKAN DPHLGTPSPE bmy_10187T0/1-836 KLALTKNPKK RPTAEKLLQH PFTTQQLPRA LLTQLLDKAN DPHLGTPSPE BACU005320/1-805 KLALTKNPKK RPTAEKLLQH PFTTQQLPRA LLTQLLDKAN DPHLGTPSPE 301 350 ENSTTRP00000008412/1-818 DCDLETYDMF PDTIHSRGQH GPAERTPSEI QFHQVKFGAP RRKETDPLNE ENSP00000294066/1-820 DCELETYDMF PDTIHSRGQH GPAERTPSEI QFHQVKFGAP RRKETDPLNE ENSBTAP00000001378/1-821 DCDLETYDIF PDTIHSRGQH GPAERTPSEI QFHQVKFGAP RRKETDPLNE bmy_10187T0/1-836 DCDLE----- ---------H GPAERTPSEI QFHQVKFGAP RRKETDPLNE BACU005320/1-805 DCDLETYDMF PDTIHSRGQH GPAERTPSEI QFHQVKFGAP RRKETDPLNE 351 400 ENSTTRP00000008412/1-818 -WEEEWTLLG KEELSSSLLQ SVQEALEERS LTIRPALELK ELDSPDDTIG ENSP00000294066/1-820 PWEEEWTLLG KEELSGSLLQ SVQEALEERS LTIRSASEFQ ELDSPDDTMG ENSBTAP00000001378/1-821 PWEEEWTLLG KEELSGSLLQ SVQEALEERS LTIRPASELQ ELDSPDDTIG bmy_10187T0/1-836 PWEEEWTLLG KEELSASLLQ SVQEALEERS LTIRPALELK ELDSPDDTIG BACU005320/1-805 PWEEEWTLLG KEELSASLLQ SVQEALEERS LTIRPALELK ELDSPDDTIG 401 450 ENSTTRP00000008412/1-818 TIRRAPFLEP T-TEPPAEDL QSSLPG---- ---------- ---------- ENSP00000294066/1-820 TIKRAPFLGP LPTDPPAEEP LSSPPG---- ---------- ---------- ENSBTAP00000001378/1-821 TIKRAPFLGS SPTEPPAEDL HPSLPG---- ---------- ---------- bmy_10187T0/1-836 TIKRAPFLEP SPTEPPAEDL QSSLPGEPQA RGTRRQALGG RGWSRTGIHG BACU005320/1-805 TIKRAPFLEP SPTEPPAEDL QSSLPG---- ---------- ---------- 451 500 ENSTTRP00000008412/1-818 ------TAPA PLPCPDSPPL LSTAWATVKH REDHERSSCR GLPPTPKVHM ENSP00000294066/1-820 ------TLPP PPSGPNSSPL LPTAWATMKQ REDPERSSCH GLPPTPKVHM ENSBTAP00000001378/1-821 ------TPPL PHPGPASPPL LPTAWATMKH REDPERSSCH GLPPTPKVHM bmy_10187T0/1-836 RSVPAGTAPP PLPGPDSPPL LSTAWATMKH REDHERSSCH GLPPTPKVHM BACU005320/1-805 ---------- ----PDSPPL LSTAWATMKH REDHERSSCH GLPPTPKVHM 501 550 ENSTTRP00000008412/1-818 GACFSKVFNG CPLRIHTAVT WIHPVTRDQF LVVGAEEGIY TLNLHELHED ENSP00000294066/1-820 GACFSKVFNG CPLRIHAAVT WIHPVTRDQF LVVGAEEGIY TLNLHELHED ENSBTAP00000001378/1-821 GACFSKVFNG CPLRIHAAIT WIHPVTRDQF LVVGAEEGIY TLNLHELHED bmy_10187T0/1-836 GACFSKVFNG CPLRIHAAVT WVHPVTRDQF LVVGAEEGIY TLNLHELHED BACU005320/1-805 GACFSKVFNG CPLRIHAAVT WVHPVTRDQF LVVGAEEGIY TLNLHELHED 551 600 ENSTTRP00000008412/1-818 TLEKLISHRC AWLYCVNNVL LSLSGKSTHI WAHDLPGLFE QRRLQQQVPL ENSP00000294066/1-820 TLEKLISHRC SWLYCVNNVL LSLSGKSTHI WAHDLPGLFE QRRLQQQVPL ENSBTAP00000001378/1-821 TLEKLISHRC AWLYCVNNVL LSLSGKSTHI WAHDLPGLFE QRRLQQQVPL bmy_10187T0/1-836 TLEKLISHRC TWLYCVNNVL LSLSGKSTHI WAHDLPGLFE QRRLQQQVPL BACU005320/1-805 TLEKLISHRC AWLYCVNNVL LSLSGKSTHI WAHDLPGLFE QRRLQQQVPL 601 650 ENSTTRP00000008412/1-818 SIPTNRLTQR IIPRRFALST KIPDTKGCLQ CRVXXXXXXX XXXXXXXXXX ENSP00000294066/1-820 SIPTNRLTQR IIPRRFALST KIPDTKGCLQ CRVVRNPYTG ATFLLAALPT ENSBTAP00000001378/1-821 SIPTNRLTQR IIPRRFALSN KIPDTKGCLQ CRVVRNPHTG STFLLAALPS bmy_10187T0/1-836 SIPTNRLTQR IIPRRFALST KIPDTKGCLQ CRVVRNPHTG STFLLAALPA BACU005320/1-805 SIPTNRLTQR IIPRRFALST KIPDTKGCLQ CRVVRNPHTG STFLLAALPT 651 700 ENSTTRP00000008412/1-818 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000294066/1-820 SLLLLQWYEP LQKFLLLKNF SSPLPSPAGM LEPLVLDGKE LPQVCVGAEG ENSBTAP00000001378/1-821 SLLLLQWYEP LQKFLLLKNF SSPLPSPAGM LEPLVLDGKE LPQVCVGAEG bmy_10187T0/1-836 GLLLLQWYEP LQKFLLLKNF SSPLPSPARM LEPLVLDGKE LPQVCVGAEG BACU005320/1-805 SLLLLQWYEP LQKFLLLKNF SSPLPSPARM LEPLVLDGKE LPQVCVGAEG 701 750 ENSTTRP00000008412/1-818 XXXXXXXXXX XXXXXXXXXX XXXXXXX-XX XXXXXXXXXX XXXXXXXXXX ENSP00000294066/1-820 PEGPGCRVLF HVLPLEAGLT PDILIPP-EG IPGSAQQVIQ VDRDTILVSF ENSBTAP00000001378/1-821 PEGPGCRVLF HVLPLEAGLT PDILIPPAEG FPGSAQQVIQ VDRDTVLVCF bmy_10187T0/1-836 PEGPGCRVLF HVLPLEAGLM PDVLLPP-EG LPGSAQQVIQ VDRDTVLVCF BACU005320/1-805 PEGPGCRVLF HVLPLEAGLT PDVLLPP-EG LPGSAQQVIQ VDRDTVLVCF 751 800 ENSTTRP00000008412/1-818 XXCVRIVNLL GEPTVTLAPV LTFDFPIETV VCLQDSVLAF WSHGMQGRSL ENSP00000294066/1-820 ERCVRIVNMQ GEPTATLAPE LTFDFPIETV VCLQDSVLAF WSHGMQGRSL ENSBTAP00000001378/1-821 DRCVRIVNLL GEPTATLAPV LTFDFPIETV VCLQDSVLAF WSHGMQGRSL bmy_10187T0/1-836 DRCVRIVNLL GEPTATLAPV LTFDFPIETV VCLQDSVLAF WSHGMQGRSL BACU005320/1-805 DRCVRIVNLL GEPTATLAPV LTFDFPIETV VCLQDSVLAF WSHGMQGRSL 801 850 ENSTTRP00000008412/1-818 DTNEVTQEIT DETRIFRVLG AHRDIILESI PTDKPGAHSN LYILTGHQSS ENSP00000294066/1-820 DTNEVTQEIT DETRIFRVLG AHRDIILESI PTDNPEAHSN LYILTGHQST ENSBTAP00000001378/1-821 DTNEVTQEIT DETRIFRVLG AHRDIILESI PTDKPGAHSN LYILTGHQSS bmy_10187T0/1-836 DTNEVTQEIT DETRIFRVLG AHRDIILESI PTDKPGAHSN LYILTGHQSS BACU005320/1-805 DTNEVTQEIT DETRIFRVLG AHRDIILESI PTGKPGAHSN LYILTGHQNS 851 900 ENSTTRP00000008412/1-818 Y ENSP00000294066/1-820 Y ENSBTAP00000001378/1-821 Y bmy_10187T0/1-836 Y BACU005320/1-805 Y