KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:14:11 2014 Check: 00 .. Name: ENSP00000352671/1-286 Len: 351 Check: 1219 Weight: 1.00 Name: ENSBTAP00000001395/1-278 Len: 351 Check: 3197 Weight: 1.00 Name: bmy_21971T0/1-239 Len: 351 Check: 1035 Weight: 1.00 Name: BACU009077/1-194 Len: 351 Check: 6948 Weight: 1.00 // 1 50 ENSP00000352671/1-286 ---------- ---------- MALVLILQLL TL-------- ---------- ENSBTAP00000001395/1-278 ---------- ---------- MAEVLSLQLL TL-------- ---------- bmy_21971T0/1-239 MEKPRHLGKK ETGGPDSCSP ERRNCWLRLL SPGNGGIQGP ELLEDRGPGD BACU009077/1-194 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000352671/1-286 ---W------ ---------- --------PL CHTDITPSVA IIVPPASYHP ENSBTAP00000001395/1-278 ---W------ ---------- --------LV CHADSTPAVS ----PASN-P bmy_21971T0/1-239 LDSWVPNEVG LGAAEGFDKT KPLRPSIGLV CHADITP--- ----TASY-P BACU009077/1-194 ---WAPR--- ---------- KPEDPGSPIY S----VP--- ----PASY-P 101 150 ENSP00000352671/1-286 KPWLGAQPAT VVTPGVNVTL RCRAPQPAWR FGLFKPGEIA PLLFRDVSSE ENSBTAP00000001395/1-278 RPWLSAQPAA VVTPGVNVTL RCQAPQPAWR FAVFRSAELT TMIHRDVSAE bmy_21971T0/1-239 KPWLGAQPAA VVTPGVNVTL RCRAPQPTWR FALFKSGEIA PVLYRDVSAA BACU009077/1-194 KPWLGAQPAA VVTPGVNVTL RCRAPQPTWR FALFKSGEIA SVLYRDVSAE 151 200 ENSP00000352671/1-286 LAEFFLEEVT PAQGGIYRCC YRRPDWGPGV WSQPSDVLEL LVTEELPRPS ENSBTAP00000001395/1-278 LAEFFLEEVT PAQGGSYHCC YWRRGWDPDV WSHPSDALEL LVTDELPRPS bmy_21971T0/1-239 LAEFFLEEVT PDQGGNYRCC YQRLDWGPGV WSHPSDALEL LVT------- BACU009077/1-194 LAEFFLEEVT PDQGGNYRCC YQRLDWGPGV WSHPSDALEL LVTG------ 201 250 ENSP00000352671/1-286 LVALPGPVVG PGANVSLRCA GRLRNMSFVL YREGVAAPLQ YRHSAQPWAD ENSBTAP00000001395/1-278 LVALPAPVVV PGANVSLRCA GRLRGMSFAL YREGEAAPLQ YQDSQQPWAD bmy_21971T0/1-239 ---------- ---------- ---------- -----VGKSD IQGGRQTQ-- BACU009077/1-194 ---------- ---------- ---------- -----SGSLD YTQGNLVRLG 251 300 ENSP00000352671/1-286 FTLLGARAPG TYSCYYHTPS APYVLSQRSE VLVISWEGEG PEARPASSAP ENSBTAP00000001395/1-278 FPLLGARAPG TYTCYYHTPS APYVLSARSE PLVVRADGER PAPRPQTRGP bmy_21971T0/1-239 ------RHKG TERNT----D TEKLRETHRE GRDVETLART RGERSAGGDR BACU009077/1-194 LAGLVLMALG TLVVF----D RRSQNRAPRY RLGLSLRGQR RLPREDGEEA 301 350 ENSP00000352671/1-286 GMQAPGPPPS DPGAQAPSLS SFRPRGLVLQ PLLPQTQDSW DPAPPPSDPG ENSBTAP00000001395/1-278 GVQAPAPPPS DPGSRPPP-S PLRPG--VQA PALPSQTRGP GPRPPPSDPG bmy_21971T0/1-239 G--------- ---------- ---------- ---------- ---------- BACU009077/1-194 GIPWVGPPFQ ETHSPPR--- ---------- ---------- ---------- 351 400 ENSP00000352671/1-286 V ENSBTAP00000001395/1-278 S bmy_21971T0/1-239 - BACU009077/1-194 -