KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:13 2014 Check: 00 .. Name: BACU011418/1-748 Len: 753 Check: 8690 Weight: 1.00 Name: ENSP00000217901/1-393 Len: 753 Check: 6229 Weight: 1.00 Name: ENSBTAP00000001405/1-392 Len: 753 Check: 3226 Weight: 1.00 Name: bmy_18757T0/1-366 Len: 753 Check: 90 Weight: 1.00 Name: ENSTTRP00000011127/1-392 Len: 753 Check: 3989 Weight: 1.00 // 1 50 BACU011418/1-748 MGCNMCVVQK PEEQYKVMLQ PVFLERHPGL ACSLQPGRHD FAIALGISVK ENSP00000217901/1-393 MALKVATV-- ---------- ---------- ---------- ---------- ENSBTAP00000001405/1-392 MALKVATA-- ---------- ---------- ---------- ---------- bmy_18757T0/1-366 MALKVATV-- ---------- ---------- ---------- ---------- ENSTTRP00000011127/1-392 MALKVATA-- ---------- ---------- ---------- ---------- 51 100 BACU011418/1-748 NPFSGDSWGG GGTVRIEDWD NSGLVRATSS APLLGSVCVG LFSVVNGKEL ENSP00000217901/1-393 ---------A GSAAK----- ---------- ---------- ---------- ENSBTAP00000001405/1-392 ---------A GGAVK----- ---------- ---------- ---------- bmy_18757T0/1-366 ---------A GGAVK----- ---------- ---------- ---------- ENSTTRP00000011127/1-392 ---------A GGAVK----- ---------- ---------- ---------- 101 150 BACU011418/1-748 SKLSQEQTLE ALRASKEPLV IQVLRRSPRL RGDGSSHDLQ LVDSGTQTDI ENSP00000217901/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001405/1-392 ---------- ---------- ---------- ---------- ---------- bmy_18757T0/1-366 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011127/1-392 ---------- ---------- ---------- ---------- ---------- 151 200 BACU011418/1-748 TFEHIMALGK LRPPTPPMVI LEPYVPSELP PISHEYYDPA EFMEGGPQEA ENSP00000217901/1-393 --------AV LGPA------ ---------- ---------- ---------- ENSBTAP00000001405/1-392 --------AA LRPA------ ---------- ---------- ---------- bmy_18757T0/1-366 --------AV LRPA------ ---------- ---------- ---------- ENSTTRP00000011127/1-392 --------AV LRPA------ ---------- ---------- ---------- 201 250 BACU011418/1-748 DRMDELEYEE VELYKTSHRD KLGLMVCYRT DDEEDLGIYV GEVNPNSIAA ENSP00000217901/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001405/1-392 ---------- ---------- ---------- ---------- ---------- bmy_18757T0/1-366 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011127/1-392 ---------- ---------- ---------- ---------- ---------- 251 300 BACU011418/1-748 KDGRIREGDR IIQINGVDVQ NREEAVAILS QEENTNISLL VARPESQLAK ENSP00000217901/1-393 ---------- ---------- ---------- ---------L LCRP------ ENSBTAP00000001405/1-392 ---------- ---------- ---------- ---------L LWRP------ bmy_18757T0/1-366 ---------- ---------- ---------- ---------L LCRP------ ENSTTRP00000011127/1-392 ---------- ---------- ---------- ---------L LCRP------ 301 350 BACU011418/1-748 RWKDSDRDDF LDDCGSENEG DLRARKLKSP PAQQRPVRDR LLKARALKIR ENSP00000217901/1-393 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001405/1-392 ---------- ---------- ---------- ---------- ---------- bmy_18757T0/1-366 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011127/1-392 ---------- ---------- ---------- ---------- ---------- 351 400 BACU011418/1-748 EERSGMTTDD DAELGWPLPN WLSGLDSNHW HLGSLCQVLG AHEAPRRN-F ENSP00000217901/1-393 ---------- ---------- ---------W ------EVLG AHEVPSRNIF ENSBTAP00000001405/1-392 ---------- ---------- ---------W ------EVLG SHEAPRRS-F bmy_18757T0/1-366 ---------- ---------- ---------W ------EVLG AHEAPRRS-F ENSTTRP00000011127/1-392 ---------- ---------- ---------W ------EVLG AHEAPRRS-F 401 450 BACU011418/1-748 S----PPSAK YGGRHTVTMI PGDGIGPELM LHVKSVFRHA CVPVDFEEVH ENSP00000217901/1-393 SEQTIPPSAK YGGRHTVTMI PGDGIGPELM LHVKSVFRHA CVPVDFEEVH ENSBTAP00000001405/1-392 SQQTIPPSAK YGGRHTVTMI PGDGIGPELM LHVKSVFRHA CVPVDFEEVH bmy_18757T0/1-366 SQQTIPPSAK YGGRHTVTMI PGDGIGPELM LHVKSVFRHA CVPVDFEEVH ENSTTRP00000011127/1-392 SQQTIPPSAK YGGRHTVTMI PGDGIGPELM LHVKSVFRHA CVPVDFEEVH 451 500 BACU011418/1-748 VSSNADEEDI RNAIMAIRRN RVALKGNIET NHNLPPSHKS RNNILRTSLD ENSP00000217901/1-393 VSSNADEEDI RNAIMAIRRN RVALKGNIET NHNLPPSHKS RNNILRTSLD ENSBTAP00000001405/1-392 VSSTADEEDI RNAIMAIRRN RVALKGNIET NHNLPPSHKS RNNILRTSLD bmy_18757T0/1-366 VSSNADEEDI RNAIMAIRRN RVALKGNIET NHNLPPSHKS RNNILRTSLD ENSTTRP00000011127/1-392 VSSNADEEDI RNAIMAIRRN RVALKGNIET NHNLPPSHKS RNNILRTSLD 501 550 BACU011418/1-748 LYANVIHCKS LPGVVTRHRD IDILIVRENT EGEYSSLEHE SVAGGVERLK ENSP00000217901/1-393 LYANVIHCKS LPGVVTRHKD IDILIVRENT EGEYSSLEHE SVAGVVESLK ENSBTAP00000001405/1-392 LYANVIHCKS LPGVVTRHRD IDILIVRENT EGEYSSLEHE SVAGVVESLK bmy_18757T0/1-366 LYANVIHCKS LPGVVTRHRD IDILIVRENT EGEYSSLEHE SVAGVVESLK ENSTTRP00000011127/1-392 LYANVIHCKS LPGVVTRHRD IDILIVRENT EGEYSSLEHE SVAGVVESLK 551 600 BACU011418/1-748 IITEAKSLRI AEYAFKLAQE SGRKKVTAVH KANIMKLGDG LFLQCCRAVA ENSP00000217901/1-393 IITKAKSLRI AEYAFKLAQE SGRKKVTAVH KANIMKLGDG LFLQCCREVA ENSBTAP00000001405/1-392 IITKAKSLRI AEYAFQLAQE SGRKKVTAVH KANIMKLGDG LFLQCCREVA bmy_18757T0/1-366 IITEAKSLRI AEYAFKLAQE SGRKKVTAVH KANIMKLGDG LFLQCCRAVA ENSTTRP00000011127/1-392 IITEARSLRI AEYAFTLARE SGRKKVTAVH KANIMKLGDG LFLQCCKAVA 601 650 BACU011418/1-748 ARYPQITFEN MIVDNTTMQL VSRPQQFDVM VMPNLYGNIV NNVCAGLVGG ENSP00000217901/1-393 ARYPQITFEN MIVDNTTMQL VSRPQQFDVM VMPNLYGNIV NNVCAGLVGG ENSBTAP00000001405/1-392 ARYPQITFEN MIVDNTTMQL VSRPQQFDVM VMPNLYGNIV NNVCAGLVGG bmy_18757T0/1-366 ARYPQITFEN MIVDNTTMQL VSRPQQFDVM VMPNLYGNIV NN-------- ENSTTRP00000011127/1-392 ARYPQITFEN MIVDNTTMQL VSRPQQFDVM VMPNLYGNIV NNVCAGLVGG 651 700 BACU011418/1-748 PGLVAGANYG HVYAVFETAT RNTGKSIANR NIANPTATLL ASCMMLDHLK ENSP00000217901/1-393 PGLVAGANYG HVYAVFETAT RNTGKSIANK NIANPTATLL ASCMMLDHLK ENSBTAP00000001405/1-392 PGLVAGANYG HVYAVFETAT RNTGKSIANK NIANPTATLL ASCMMLDHLK bmy_18757T0/1-366 ---------- --------AT RNTGKSIANR NIANPTATLL ASCMMLDHLK ENSTTRP00000011127/1-392 PGLVAGANYG HVYAVFETAT RNTGKSIANR NIANPTATLL ASCMMLDHLK 701 750 BACU011418/1-748 LHSYATSIRK AVLASMDNEN MHTPDIGGQG TTSEAIQDII RRIRVINGRA ENSP00000217901/1-393 LHSYATSIRK AVLASMDNEN MHTPDIGGQG TTSEAIQDVI RHIRVINGRA ENSBTAP00000001405/1-392 LHSYATSIRK AVLASMDNEN MHTPDIGGQG TTSEAIQDII RHIRVINGRA bmy_18757T0/1-366 LHSYATSIRK AVLASMDNEN MHTPDIGGQG TTSEAIQDII RRIRVINGRA ENSTTRP00000011127/1-392 LHSYATSIRK AVLASMDNEN MHTPDIGGQG TTSEAIQDII RRIRVINGRA 751 800 BACU011418/1-748 VEA ENSP00000217901/1-393 VEA ENSBTAP00000001405/1-392 VEA bmy_18757T0/1-366 VEA ENSTTRP00000011127/1-392 VET