KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:14:17 2014  Check: 00 ..

 Name: BACU018363/1-188          Len:    196  Check:  2099  Weight:  1.00
 Name: ENSBTAP00000001425/1-194  Len:    196  Check:  4841  Weight:  1.00
 Name: ENSP00000229903/1-183     Len:    196  Check:  3439  Weight:  1.00
 Name: bmy_08560T0/1-183         Len:    196  Check:  4532  Weight:  1.00
 Name: ENSTTRP00000000397/1-185  Len:    196  Check:  6247  Weight:  1.00

//


                          1                                                   50
BACU018363/1-188          MEQWLAELGV GPRNQPGWWQ NPALQIHRAQ TSGEKVEAAV TPKAAPGWLK 
ENSBTAP00000001425/1-194  MEQRLAEFR- AARKRAGLVA EPSASSQSTQ TSGEKAEAAT TPKAPSGWLK 
ENSP00000229903/1-183     MEQRLAEFR- AARKRAGLAA QPPAASQGAQ TPGEKAEAAA TLKAAPGWLK 
bmy_08560T0/1-183         MEQRLAEFR- EVRKRAGLAA EPSTSSQRAQ TSGEKAEAAA TPKAAPGWLK 
ENSTTRP00000000397/1-185  MERRLAEFR- EARKRAGLAA EPSTSRQRAQ TSGEKAEAAA TPKAAPGWLK 


                          51                                                 100
BACU018363/1-188          LFLVWKPRPL STQAQPSLAQ GAAWPGDCMS QPSQNPAKPP PLPPPP---- 
ENSBTAP00000001425/1-194  RFLVWKPRPP SAQAQPSLAQ GAAWPRGLES QPPWSPAEEA PPPPQPPPPQ 
ENSP00000229903/1-183     RFLVWKPRPA SARAQPGLVQ EAAQPQGSTS ETPWNTAI-- PLPS------ 
bmy_08560T0/1-183         RFLVWKLRPA SAQAQPNLAQ GAVRPGGRAS QPPGNPAKPP PAPP------ 
ENSTTRP00000000397/1-185  RFLVWKLRPA SAQAQPNLAQ GAAQPGGRAS QPPGNPAERP PAPP------ 


                          101                                                150
BACU018363/1-188          ---QGGQSPL TDITFLKVLL WLVLLGLFVE LEFGLAYFVL SLFYWRHVG- 
ENSBTAP00000001425/1-194  PLTPRDRSLL TSVTLLKVLL WLVLLGLFVE LEFGLAYFVL SLFYWMYVGM 
ENSP00000229903/1-183     ---CWDQSFL TNITFLKVLL WLVLLGLFVE LEFGLAYFVL SLFYWMYVGT 
bmy_08560T0/1-183         ---PQDQSRL --ITFLKVLL WLVLLGLFVQ LEFGLAYFVL SLFYWMYVGT 
ENSTTRP00000000397/1-185  ---PQDQSLL TNITFLKVLL WLVLLGLFVQ LEFGLAYFVL SLFYWMYVGT 


                          151                                                200
BACU018363/1-188          RGPEEKTEGG RASGYSVFNP GCEAIQGTLI AQQLERELHL RPLQGS 
ENSBTAP00000001425/1-194  RGPEEKMQGE KSA-YSVFNP GCEAIQGSLT AEQLERELHL RPLPRR 
ENSP00000229903/1-183     RGPEEKKEGE KSA-YSVFNP GCEAIQGTLT AEQLERELQL RPLAGR 
bmy_08560T0/1-183         RGPEEKTEGE KSA-YSVFNP GCEAIQGTLT AEQLERELHL GPLQGR 
ENSTTRP00000000397/1-185  RGPEEKTEGE KSA-YSVFNP GCEAIQGTLT AEQLERELHL RPLQGR