KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:21 2014 Check: 00 .. Name: ENSP00000316909/1-589 Len: 590 Check: 5829 Weight: 1.00 Name: ENSBTAP00000001445/1-589 Len: 590 Check: 5553 Weight: 1.00 Name: bmy_04773T0/1-526 Len: 590 Check: 9017 Weight: 1.00 Name: BACU018477/1-589 Len: 590 Check: 6780 Weight: 1.00 Name: ENSTTRP00000001310/1-585 Len: 590 Check: 5243 Weight: 1.00 // 1 50 ENSP00000316909/1-589 MPFKAFDTFK EKILKPGKEG VKNAVGDSLG ILQRKIDGTT EEEDNIELNE ENSBTAP00000001445/1-589 MPFKAFNTFK EKILKPGKEG VKNAVGDSLG ILQRKIDGTN EEEVNIELNE bmy_04773T0/1-526 MPFKAFDTFK EKILKPGKEG VKNAVGDSLG ILQRKIDGTS EEEGNIELNE BACU018477/1-589 MPFKAFDTFK EKILKPGKEG VKNAVGDSLG ILQRKIDGTS EEEGNIELNE ENSTTRP00000001310/1-585 MPFKAFDTFK EKFLKPGKEG VKNAVGDSLG ILQRKIDGTS EEEGNIELNE 51 100 ENSP00000316909/1-589 EGRPVQTSRP SPPLCDCHCC GLPKRYIIAI MSGLGFCISF GIRCNLGVAI ENSBTAP00000001445/1-589 EGRPVQTPRQ KPPLCDCHCC GVPKRYIIAI MSGLGFCISF GIRCNLGVAI bmy_04773T0/1-526 EGRPXQTSRQ SPPLCDCHCC GLPKRYIIAI MSGLGFCISF GIRCNLGVAI BACU018477/1-589 EGRPVQTSRQ SPPLCDCHCC GLPKRYIIAI MSGLGFCISF GIRCNLGVAI ENSTTRP00000001310/1-585 EGRPVQASKQ SPPLCDCHCC GLPKRYIIAI MSGLGFCISF GIRCNLGVAI 101 150 ENSP00000316909/1-589 VEMVNNSTVY VDGKPEIQTA QFNWDPETVG LIHGSFFWGY IMTQIPGGFI ENSBTAP00000001445/1-589 VEMVNNSTVY VDGKPEIQTA QFNWDPETVG LIHGSFFWGY IVTQIPGGFI bmy_04773T0/1-526 VEMVNNNTIY --------TA QFNWDPETVG LIHGSFFWGY IVTQIPGGFI BACU018477/1-589 VEMVNNNTIY VDGKPEIQTA QFNWDPETVG LIHGSFFWGY IVTQIPGGFI ENSTTRP00000001310/1-585 VEMVNNNTIY VDGKPEIQTA QFNWDPETVG LIHGSFFWGY IVTQIPGGFI 151 200 ENSP00000316909/1-589 SNKFAANRVF GAAIFLTSTL NMFIPSAARV HYGCVMCVRI LQGLVEGVTY ENSBTAP00000001445/1-589 SNKFAANRVF GAAIFFTSTL NMFIPSAARA HYGCVMCVRI LQGLVEGVTY bmy_04773T0/1-526 SNKFAANRVF GAAIFLTSTL NMFIPSAARV HYGCVMCVRI LQGLVEGVTY BACU018477/1-589 SNKFAANRVF GAAIFLTSTL NMFIPSAARV HYGCVMCVRI LQGLVEGVTY ENSTTRP00000001310/1-585 SNKFAANR-F GAAIFLTSTL NMFIPSAARV HYGCVMCVRI LQGLVEGVTY 201 250 ENSP00000316909/1-589 PACHGMWSKW APPLERSRLA TTSFCG-SYA GAVVAMPLAG VLVQYIGWSS ENSBTAP00000001445/1-589 PACHGMWSKW APPLERSRLA TTSFCGDSYA GAVIAMPLAG VLVQYIGWAS bmy_04773T0/1-526 PACHGMWS-- ---------- -------SYA GAVIAMPLAG VLVQYMGWAS BACU018477/1-589 PACHGMWSKW APPLERSRLA TTSFCG-SYA GAVIAMPLAG VLVQYMGWAS ENSTTRP00000001310/1-585 PACHGMWSKW APPLERSRLA TTSFCG-SYA GAVIAMPLAG VLVQYMGWAS 251 300 ENSP00000316909/1-589 VFYIYGMFGI IWYMFWLLQA YECPAAHPTI SNEEKTYIET SIGEGANVVS ENSBTAP00000001445/1-589 VFYTYGILGI IWYMFWLLQA YECPAAHPTI SQEERTYIET SIGEGANLVS bmy_04773T0/1-526 VFYIYEM--- ---------- ---------- --EENETISS ---------S BACU018477/1-589 VFYIYGMFGI IWYMFWLLQA YECPAVHPTI SHEERTYIET SIGEGANLVS ENSTTRP00000001310/1-585 VFYIYGIFGI IWYMFWLLQA YECPAVHPTI SHEERTYIET SIGEGANLVS 301 350 ENSP00000316909/1-589 LSKFSTPWKR FFTSLPVYAI IVANFCRSWT FYLLLISQPA YFEEVFGFAI ENSBTAP00000001445/1-589 LSKFNTPWKR FFTSLPVYAI IVANFCRSWT FYLLLISQPA YFEEVFGFAI bmy_04773T0/1-526 LLFFNC---R FFTSLPVYAI IVANFCRSWT FYLLLISQPA YFEEVFGFAI BACU018477/1-589 LSKFNTPWKR FFTSLPVYAI IVANFCRSWT FYLLLISQPA YFEEVFGFAI ENSTTRP00000001310/1-585 LSKFNTPWKK FFTSLPVYAI IVANFCRSWT FYLLLISQPA YFEEVFGFAI 351 400 ENSP00000316909/1-589 SKVGLLSAVP HMVMTIVVPI GGQLADYLRS RQILTTTAVR KIMNCGGFGM ENSBTAP00000001445/1-589 SKVGLLSAVP HMVMTIIVPI GGQLADYLRS RKILTTTAVR KIMNCGGFGM bmy_04773T0/1-526 SKVGLLSAVP HMVMTIIVPI GGQLADYLRS RKILTTTAVR KIMNCGGFGM BACU018477/1-589 SKVGLLSAVP HMVMTIIVPI GGQLADYLRS RKILTTTAVR KIMNCGGFGM ENSTTRP00000001310/1-585 SKVGLLSALP HMVMTIIVPI GGQLADHLRS RKILTTTAVR KIMNCGGFGM 401 450 ENSP00000316909/1-589 EATLLLVVGF SHTKGVAISF LVLAVGFSGF AISGFNVNHL DIAPRYASIL ENSBTAP00000001445/1-589 EATLLLVVGF SHTKGMAISF LVLAVGFSGF AISGFNVNHL DIAPRYASIL bmy_04773T0/1-526 EATLLLVVGF SHTKGVAISF LVLAVGFSGF AISGFNVNHL DIAPRYASIL BACU018477/1-589 EATLLLVVGF SHTKGVAISF LVLAVGFSGF AISGFNVNHL DIAPRYASIL ENSTTRP00000001310/1-585 EATLLLVVGF SHTKGVAISF LVLAVGFSGF AIS-FNVNHL DIA-RYASIL 451 500 ENSP00000316909/1-589 MGISNGVGTL SGMVCPLIVG AMTRHKTREE WQNVFLIAAL VHYSGVIFYG ENSBTAP00000001445/1-589 MGISNGVGTL SGMVCPLIVG AMTKHKTREE WQNVFLIAAL VHYSGVIFYG bmy_04773T0/1-526 MGISNGVGTL SGMVCPLIVG AMTKHKTREE WQNVFLIAAL VHYSGVIFYG BACU018477/1-589 MGISNGVGTL SGMVCPLIVG AMTKHKSREE WQNVFLIAAL VHYSGVIFYG ENSTTRP00000001310/1-585 MGISNGVGTL SGMICPL-VG AMTKHKTREE WQNVFLIAAL VHYSGVIFYG 501 550 ENSP00000316909/1-589 VFASGEKQEW ADPENLSEEK CGIIDQDELA EEIELNHESF ASPKKKMSYG ENSBTAP00000001445/1-589 IFASGEKQEW ADPENLSEEK CGIIDQDELA EETELNHESF ASPRK-MSYG bmy_04773T0/1-526 VFASGEKQEW ADPENLSEEK CGIIDXDELT EELELNHESF TSPKKKTSYG BACU018477/1-589 VFASGEKQEW ADPENLSEEQ CGIIDRDELA EETELNHESF TSSRKMTSYG ENSTTRP00000001310/1-585 VFASGEKQEW ADPENLSEEK CGIIDNDELA EEIELNHESF TSPKKKMSYG 551 600 ENSP00000316909/1-589 ATSQNCEVQK KEWKGQRGAT LDEEELTSYQ NEERNFSTIS ENSBTAP00000001445/1-589 ATTQNCEVQR KEWRGQRGVT LNEEELTSYQ NEGGNFSDAS bmy_04773T0/1-526 AXTQNCEVQR KEWRGQRGVT LDEEELTSYQ NEEGNFSDTS BACU018477/1-589 ATTQNCDVQR EECRGQRGVT LDEEEPTSYQ NEEGNFSDTS ENSTTRP00000001310/1-585 ATTQNCEAQR KEWSGQRGAT LDEEEPASYQ NEDGNFSDTS