KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:22 2014 Check: 00 .. Name: ENSP00000413152/1-222 Len: 271 Check: 9060 Weight: 1.00 Name: ENSBTAP00000001452/1-218 Len: 271 Check: 5798 Weight: 1.00 Name: ENSTTRP00000009207/1-255 Len: 271 Check: 1420 Weight: 1.00 Name: bmy_14393T0/1-210 Len: 271 Check: 3144 Weight: 1.00 Name: BACU014068/1-189 Len: 271 Check: 5237 Weight: 1.00 // 1 50 ENSP00000413152/1-222 ---------- MPKTMHFLFR FIVFFYLWGL FTAQRQKKEE STEEVKIEVL ENSBTAP00000001452/1-218 ---------- ----MHFLFR LILFFYVWGI FTAQGQKAEE TTEEVKIEVL ENSTTRP00000009207/1-255 ---------- TLGIMHFLFR LIIFVYLWGI FTAQGQKAEE SIEEVKIEVL bmy_14393T0/1-210 MRERGGHLGP TLGIMHFLFR LIIFFYLWGI FTAQGQKAEE SIEEVKIEVL BACU014068/1-189 MRERGGHLGP TLGIMHFLFR LIIFFYLWGI FTAQGQKAEE SIEEVKIEVL 51 100 ENSP00000413152/1-222 HRPENCSKTS KKGDLLNAHY DGYLAKDGSK FYCSRTQNEG HPKWFVLGVG ENSBTAP00000001452/1-218 HRPENCSKTS KKGDLLNAHY DGFLAKDGSK FYCSRTQNEG HPKWFVLGVG ENSTTRP00000009207/1-255 HRPENCSNTS KKGDVLNAHY DGFLAKDGSK FYCSRTQNEG HPKWFVLGVG bmy_14393T0/1-210 HRPENCSNTS KKGDLLNAHY DGFLAKDGSK FYCSRTENEG HPKWFVLGVG BACU014068/1-189 HRPENCSNTS KKGDLLNAHY DGFLAKDGSK FYCSRTENEG HPKWFVLGVG 101 150 ENSP00000413152/1-222 QVIKGLDIAM TDMCPGEKRK VVIPPSFAYG KEGYAEGKIP PDATLIFEIE ENSBTAP00000001452/1-218 QVIKGLDIGM MDMCPGEKRK LIIPPSFAYG KEGYAEGKIP PDATLIFEIE ENSTTRP00000009207/1-255 QVIKGLDIGM TDMCPGEKRK LIIPPSFAYG KEGYGILE-- ---EVFPVRN bmy_14393T0/1-210 QVIKGLDIGM TDMCPGEKRK LIIPPSFAYG KEGYGVFN-- ---KYIKIMN BACU014068/1-189 QVIKGLDIGM TDMCPGEKRK LIIPPSFAYG KEGYG----- ---------- 151 200 ENSP00000413152/1-222 LYAVTKGPRS IETFKQI--- ---------- ---------- ---------- ENSBTAP00000001452/1-218 LYAVTKGPRS VETFKQI--- ---------- ---------- ---------- ENSTTRP00000009207/1-255 IFACHRAPLH VLKCMLLVIN STCXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_14393T0/1-210 LTS------- ---------- ---------- ---------- ---------- BACU014068/1-189 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000413152/1-222 ------DMDN DRQLSKAEIN LYLQREFEKD EKPRDKSYQD AVLEDIFKKN ENSBTAP00000001452/1-218 ------DTDN DRQLSKTEIS HYLKKEFEKD EKPRDQSYQT AVLEDFFKKN ENSTTRP00000009207/1-255 XXXXXXDADN DRQLFK-EIS HYLKKEFEKD EKPRDKSYQN AVLEDIFKKN bmy_14393T0/1-210 ------NITN TSIL---HIS HYLKKEFEKD EKPRDKSYQN AVLEDIFKKN BACU014068/1-189 ---------- -------KIS HYLKKEFEKD EKPRDKSYQN AVLEDIFKKN 251 300 ENSP00000413152/1-222 DHDGDGFISP KEYNVYQHDE L ENSBTAP00000001452/1-218 DHDGDGFISS KEYNVYQHDE L ENSTTRP00000009207/1-255 DHDGDGFISS KEYNVYQHDE L bmy_14393T0/1-210 DHDGDGFISS KEYNVYQHDE L BACU014068/1-189 DHDGDGFISS KEYNVYQHDE L