KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:23 2014 Check: 00 .. Name: ENSP00000270800/1-574 Len: 595 Check: 7688 Weight: 1.00 Name: ENSBTAP00000001455/1-581 Len: 595 Check: 2628 Weight: 1.00 Name: ENSTTRP00000015315/1-574 Len: 595 Check: 1562 Weight: 1.00 Name: bmy_04560T0/1-595 Len: 595 Check: 1339 Weight: 1.00 Name: BACU005779/1-581 Len: 595 Check: 3937 Weight: 1.00 // 1 50 ENSP00000270800/1-574 MRTLLTILTV GSLAAHAPED PSDLLQHVKF QSSNFENILT WDSGPEGTPD ENSBTAP00000001455/1-581 MRTLLTILAA GSLLAHITED TSDLLQHVKF QSSNFENILT WDGRPESAPD ENSTTRP00000015315/1-574 MRMLLVILAA GSLVAHFAED TSDLLQHVKF QSSNFENILT WDSRPESAPD bmy_04560T0/1-595 MRTLLIILAA GSLVAHIAED TSDLLQHVKF QSSNFENILT WDSRPESAPD BACU005779/1-581 MRTLLIILAA GSLVAHIAED TSDLLQHLKF QSSNFENILT WDSRPESAPD 51 100 ENSP00000270800/1-574 TVYSIEYKTY GERDWVAKKG CQRITRKSCN LTVETGNLTE LYYARVTAVS ENSBTAP00000001455/1-581 TVYSVQYKTY GEEEWLEKEG CQRITQKSCN LTMETSNLTE LYYARVTATD ENSTTRP00000015315/1-574 TVYSVQYKTY GETEWQAKEG CQRITRKSCN LTMETGNLTD FYYARVTAID bmy_04560T0/1-595 TIYSVQYKTY GETEWQVKEG CQRITRKSCN LTMETGNLTD LYYARVTAID BACU005779/1-581 TVYSVQYKTY GETEWQVKEG CQRITRKSCN LTVETGKLTD LYYARVTAID 101 150 ENSP00000270800/1-574 AGGRSATKMT DRFSSLQHTT LKPPDVTCIS KVRSIQMIVH PTPTPIRAGD ENSBTAP00000001455/1-581 GAGRSATKMT NRFSSLQHTS IKPPDVTCIP KVRSIQMIVH PTYTPIRAQN ENSTTRP00000015315/1-574 AGGQSATKMT DRFSSLQHTI IKPPDVTCIP KVRSIQLIVH PTYTPIHTGN bmy_04560T0/1-595 AGGRSATKMT DRFSSLQHTI IKPPDVTCIP KVRSIQMIVH PTYTPIHTGN BACU005779/1-581 AGGRSATKMT DRFSSLQHTI IKPPDVTCIP KVRSIQMIVH PTYTPIHTGN 151 200 ENSP00000270800/1-574 GHRLTLEDIF HDLFYHLELQ VNRTYQMHLG GKQREYEFFG LTPDTEFLGT ENSBTAP00000001455/1-581 GHQLTLENIF QDLLYHLKLR INHTYQMHLE GKQREFEFVG LTPDTEFLGT ENSTTRP00000015315/1-574 GHRLTLEDIF QDLFYHLDLH INHTYQMHLG GKQREFEFFG LTPDTEFLGT bmy_04560T0/1-595 GHRLTLEDIF QDLFYHLKLH INHTYQMHLG GKQREFEFFG LTPDTEFLGT BACU005779/1-581 GHRLTLEDIF QDLFYHLKLH INHTYQMHLG GKQREFEFFG LTPDTEFLGT 201 250 ENSP00000270800/1-574 IMICVPTWAK ESAPYMCRVK TLPDRTWTYS FSGAFLFSMG FLVAVLCYLS ENSBTAP00000001455/1-581 IMICIPNLFK ESAPYMCRVK TLPDRTWTYS FSGAFLFSLG FLVAGLCYLS ENSTTRP00000015315/1-574 IVSLVPTWSK KSIPYMYRAK TLPDQTWTYS FSGAFLFSMG FLVAGLCYLS bmy_04560T0/1-595 IVSIVPTWSK KSTPYVCRAK TLPDQTWTYS FSGAFLFSMG FLFAGLCYLS BACU005779/1-581 IVSIVPTWSK KSTPYMWRAK TLPDQTWTYS FSGAFLFSVG FLFAGLCYLS 251 300 ENSP00000270800/1-574 YRYVTKPPAP PNSL------ --------NV QRVLTFQPLR FIQEHVLIPV ENSBTAP00000001455/1-581 YRYITKPPPP PSSL------ --------NV QHILPFRPLQ FIQEHTLIPV ENSTTRP00000015315/1-574 YRYITKPPPP PNSL------ --------DV QHVLTFQPLQ FIQEHILSPV bmy_04560T0/1-595 YRYITKPPLP PNSLVSRGPG EDGEAEGRNV QHVLTFQPLQ FIQEHILSPV BACU005779/1-581 YRYITKPHLP PNSL------ --------NV QHVLTFQPLQ LIQEHILSPV 301 350 ENSP00000270800/1-574 FDLSGPSSLA QPVQYSQIRV SGPREPAGAP QRHSLSEITY LGQPDISILQ ENSBTAP00000001455/1-581 FDLSGSGGLA QPVQYSEVKV SNPTEPPGPP PRHSLPEIAY LGQPDLPVLR ENSTTRP00000015315/1-574 FDLSGPSGLT QPVQYSQVKV SGPIEPPGAP PRHSLSEVAY LGQPDLSILR bmy_04560T0/1-595 LDLSGPSGLA QPVQYSQVKV SGPIEPPGAP RRHSLSESAY LGQPDLSILR BACU005779/1-581 FDLSGPSGLA QPVQYSQVKV SGPIEPPGAP PRHNLSEIAY LGQPDLSILQ 351 400 ENSP00000270800/1-574 PSNVPPPQIL SPLSYAPNAA PEVGPPSYAP QVTPEAQFPF YAPQAISKVQ ENSBTAP00000001455/1-581 PSGGPPHQAL PVLSYAPQAA PEGRPSSYAP QGALEAKPPS YTPQAVSETQ ENSTTRP00000015315/1-574 PSGGPPLQTL PPLPYAPQAA PEGGPLSYAP QVTPQTKPPS YTPQAISEAQ bmy_04560T0/1-595 PSGGPPLQTL PPLSYAPQAA PEGGPPSYAP QVTPKAKPPS YTPQAISEVQ BACU005779/1-581 PSGGPPLQTL PPLSYAPQAA PEGGPPSYAP QVTPKAKPPS YTPQAISEVQ 401 450 ENSP00000270800/1-574 PSSYAPQATP DSWPPSYGVC MEGSGKDSPT GTLSSPKHLR PKGQLQKEPP ENSBTAP00000001455/1-581 LPSYTPRATP DNWPPSYGMC GEGSGRDSPP VTRSGPKHLG TKGQLQKEVP ENSTTRP00000015315/1-574 PPSYTPQATP DSWPPSYGIC GEGSGRDPPP MTPSGPKHLG TKGQLQKEAP bmy_04560T0/1-595 TPSYTPQATP DTWPPSYGIC GEGSGRDPPP MILSGPKHLG TKAQLQKEAX BACU005779/1-581 TPSYTPQATP DSWPPSYGIC GEGSGRDPPP MTLSGPKRLG TKGQLQKEAP 451 500 ENSP00000270800/1-574 AGSCMLGGLS LQEVTSLAME ESQEAKSLHQ PLGICTDRTS DPNVLHSGEE ENSBTAP00000001455/1-581 AGSCSPTGLS LQEVTPLAVE DPQEAKSSHQ CLRVHTDSDS DSDTIGQREP ENSTTRP00000015315/1-574 AGSCSPGGLS LQQVTSLTME DPQEVKSFHQ HLGVHTDREP DSDVVRRGEP bmy_04560T0/1-595 AGSCSPGGLS LQQVTSLAME DPQEVKSFHQ HLGVHTDREP DSDVIRRGEP BACU005779/1-581 AGSCSPGGLS LQQVTSLAME DPQEVKSFHQ HLGVHTDREP DSDVIRRGEP 501 550 ENSP00000270800/1-574 GTPQYLKGQL PLLSSVQIEG HPMSLPLQPP SRPCSPSDQG PSPWGLLESL ENSBTAP00000001455/1-581 GTRSSLKGQL PLLSSVQIEG HPGCLPLQTP SLPCSPTDKG PSPWGLLESL ENSTTRP00000015315/1-574 RTRSYVKGQL PLLSSVQIEG HPVSLPLQTA SRPCSPTDKG PSPWGLLESL bmy_04560T0/1-595 RTRSYVKGQL PLLSSVQIEG HPMSLPLQTP SRPCSPTDTG PSPWGLLESL BACU005779/1-581 RTRSYVKGQL PLLSSVQIEG HPMSLPLQTP SHPCSPTDKG PSPWGLLESL 551 600 ENSP00000270800/1-574 VCP------- KDEAKSPAPE TSDLEQPTEL DSLFRGLALT VQWES ENSBTAP00000001455/1-581 VCPSDEDPVS KTEAESPGLQ APDLESPTEL DSLFRGLALT VQWES ENSTTRP00000015315/1-574 VCP------- KTEAQSPGPR APDLESPMEL DSLFRGLALT VQWET bmy_04560T0/1-595 VCPSDEGPAS ETEAKSPGPR APDLESPTEV DSLFRGLALT VQWES BACU005779/1-581 VCPSDEGPAS ETEAKSPGPR APDLESPTEL DSLFRGLALT VQWES