KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:24 2014 Check: 00 .. Name: BACU006047/1-386 Len: 578 Check: 2915 Weight: 1.00 Name: ENSP00000282570/1-515 Len: 578 Check: 8604 Weight: 1.00 Name: ENSTTRP00000007090/1-513 Len: 578 Check: 9653 Weight: 1.00 Name: bmy_18020T0/1-508 Len: 578 Check: 6712 Weight: 1.00 Name: ENSBTAP00000001466/1-526 Len: 578 Check: 7134 Weight: 1.00 // 1 50 BACU006047/1-386 ---------- ---------- ---------- ---------- ---------- ENSP00000282570/1-515 MGSLSSRVLR QPRPALAQQA QGARAGGSAR RPDTGDDAAG HGFCYCAGSH ENSTTRP00000007090/1-513 MGSLSSRVLR QPGRARGQQE PGSGAGGSAR RLESGGDAAA HGFCYCPGSR bmy_18020T0/1-508 MGSLSSRVLR HPGRARAQQE PGSGAGGSAR RPESGGDAAA HGFCYCPGSR ENSBTAP00000001466/1-526 MGLLSSRVLR HPGRTRAQPE PASGAGGSAR RPETGGDAPG HGFCYCPGSH 51 100 BACU006047/1-386 ---------- ---------- ---------- ---------- ---------- ENSP00000282570/1-515 KRKRSSGSFC YCHPDSETDE DEEEGDEQQR LLNTPRRKKL KSTSKYIYQT ENSTTRP00000007090/1-513 KRKRSGEAFC SCHPDSETDV N-EEGDEQQR LLNTPRRKKL KSTSKYIYQT bmy_18020T0/1-508 KRKRSSGAFC YCHPDSETDE DEEEGDEQQR LLNTPRRKKL KSTSKYIYQT ENSBTAP00000001466/1-526 KRKRNSGTFC YCNPDSETDE DEEEGDEQQR LLNTPRRKKL KSTSKYIYQT 101 150 BACU006047/1-386 ---------- ---------- ---------- ---------- ----MNIIEL ENSP00000282570/1-515 LFLNGENSDI KICALGEEWS LHKIYLCQSG YFSSMFSGSW KESSMNIIEL ENSTTRP00000007090/1-513 LFLNGENSDI KICALGEEWS LHKIYLCQSG YFSSMFSGSW KESSMNIIEL bmy_18020T0/1-508 LFLNGENSDI KICALGEEWS LHKIYLCQSG YFSSMFSGSW KESSMNIIEL ENSBTAP00000001466/1-526 LFLNGENSDI KICALGEEWS LHKIYLCQSG YFSSMFSGSW KESSMNTIEL 151 200 BACU006047/1-386 EIPDQNIDIE ALQVAFGSLY RDDVLIKPSR VIAILAAACM LQLDGLIQQC ENSP00000282570/1-515 EIPDQNIDVE ALQVAFGSLY RDDVLIKPSR VVAILAAACL LQLDGLIQQC ENSTTRP00000007090/1-513 EIPDQNIDIE ALQVAFGSLY RDDVLIKPSR VIAILAAASM LQLDGLIQQC bmy_18020T0/1-508 EIPDQNIDIE ALQVAFGSLY RDDVLIKPSR VIAILAAACM LQLDGLIQQC ENSBTAP00000001466/1-526 EIPDQNIDIE ALQVAFGSLY RDDVLIKPSR VIAILAAACM LQLDGLIQQC 201 250 BACU006047/1-386 GETMKETINV KTVCGYYTSA GTYGLDSVKK ---------- ---------- ENSP00000282570/1-515 GETMKETVNV KTVCGYYTSA GTYGLDSVKK KCLEWLLNNL MTHQNVELFK ENSTTRP00000007090/1-513 GETMKETVNV KTVCGYYTSA GTYGLDSVKK KCLEWLLNNL MTHQNVELFK bmy_18020T0/1-508 GETMKETINV KTVCGYYTSA GTYGLDSVKK KCLEWLLNNL MTHQNVELFK ENSBTAP00000001466/1-526 GETMKETINV KTVCGYYTSA GTYGLDSVKK KCLEWLLNNL MTHQNVELFK 251 300 BACU006047/1-386 --NINVMKQL IGSSNLFVMQ VEMDVYTALK KWMFLQLVPS WNGSLKQLLT ENSP00000282570/1-515 ELSINVMKQL IGSSNLFVMQ VEMDIYTALK KWMFLQLVPS WNGSLKQLLT ENSTTRP00000007090/1-513 ELSINVMKQL IGSSNLFVMQ VEMDVYTALK KWMFLQLVPS WNGSLKQLLT bmy_18020T0/1-508 ELSINVMKQL IGSSNLFVMQ ---------- -WMFLQLVPS WNGSLKQLLT ENSBTAP00000001466/1-526 ELSINVMKQL IGSSNLFVMQ VEMDVYTALK KWMFLQLVPS WNGSLKQLLT 301 350 BACU006047/1-386 ETDVWFSKRR TDFEGMTFLE TEQGKPFVSV FRHLRLQYII SDLASARIIE ENSP00000282570/1-515 ETDVWFSKQR KDFEGMAFLE TEQGKPFVSV FRHLRLQYII SDLASARIIE ENSTTRP00000007090/1-513 ETDVWFSNRR KDFEGMTFLE TEQGKPFMSV FRHLRLQYII SDLASARIIE bmy_18020T0/1-508 ETDVWFSKRR TDFEGMTFLE TEQGKPFVSV FRHLRLQYII SDLASARIIE ENSBTAP00000001466/1-526 ETDVWFSKRK KDFEGMTFLE TEQGKPFVSV FRHLRLQYII SDLASARIIE 351 400 BACU006047/1-386 QDSLVPSEWL SSVYKQQWLA MLRAEQDSEV GPQEINKEEL EGNSMRCGRK ENSP00000282570/1-515 QDAVVPSEWL SSVYKQQWFA MLRAEQDSEV GPQEINKEEL EGNSMRCGRK ENSTTRP00000007090/1-513 QDSLVPSEWL SSVYKQQWFA MLRAEQDSEV GPQEINKEEL EGNSMRCGRK bmy_18020T0/1-508 QDSLVPSEWL SSVYKQQWLA MLRAEQD--- ---KINKEEL EGNSMRCGRK ENSBTAP00000001466/1-526 QDSLVPSEWL SSVYKQQWLA MLRAEQDSEV GPQEINKEEL EGNSMRCGRK 401 450 BACU006047/1-386 LANDGEYCWR WTGFNFGFDL LVTYTNRYII FKRNTLNQPC SGSSVGGPGP ENSP00000282570/1-515 LAKDGEYCWR WTGFNFGFDL LVTYTNRYII FKRNTLNQPC SGS------- ENSTTRP00000007090/1-513 LAKDGEYCWR WTGFNFGFDL LVTYTNRYII FKRNTLNQPC SGS------- bmy_18020T0/1-508 LAKDGEYCWR WTGFNFGFDL LVTYTNRYII FKRNTLNQPC SGS------- ENSBTAP00000001466/1-526 LAKDGEYCWR WTGFNFGFDL LVTYTNRYII FKRNTLNQPC SGS------- 451 500 BACU006047/1-386 PPERENAGAE KGPGPESEIG EEAVLDPRTE DVPEEDLEGK TEEEIEMMKL ENSP00000282570/1-515 ---------- ---------- --VSLQPRR- ---------- -----SIAFR ENSTTRP00000007090/1-513 ---------- ---------- --VSLQPRR- ---------- -----SIAFR bmy_18020T0/1-508 ---------- ---------- --VSLQPRR- ---------- -----SIAFR ENSBTAP00000001466/1-526 ---------- ---------- --VSLQPRR- ---------- -----SIAFR 501 550 BACU006047/1-386 MGFASFDSTK AVHESKRWIQ QTFGFYCMRT E------ILK ND----FFPL ENSP00000282570/1-515 LRLASFDSS- ----GKLICS RTTGYQILTL EKDQEQVVMN LDSRLLIFPL ENSTTRP00000007090/1-513 LRLASFDSS- ----GKLICS RTTGYQILTL EKDQEQVVMN LDSRLLIFPL bmy_18020T0/1-508 LRLASFDSS- ----GKLICS RTTGYQILTL EKDQEQVVMN LDSRLLIFPL ENSBTAP00000001466/1-526 LRLASFDSS- ----GKLICS RTTGYQILTL EKDQEQVVMN LDSRLLIFPL 551 600 BACU006047/1-386 ILIRTVDFVF CI-------- -------- ENSP00000282570/1-515 YI--CCNFLY ISPEKKN--- -------- ENSTTRP00000007090/1-513 YI--CCNFLY ISPEKN---- -------- bmy_18020T0/1-508 YI--CCNFLY ISPEKRTENN -HPENPEN ENSBTAP00000001466/1-526 YI--CCNFLY ISPEKRTENS HHPENPEN