KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:26 2014 Check: 00 .. Name: ENSP00000368356/1-890 Len: 894 Check: 2599 Weight: 1.00 Name: ENSTTRP00000006511/1-891 Len: 894 Check: 8512 Weight: 1.00 Name: ENSBTAP00000001474/1-893 Len: 894 Check: 2096 Weight: 1.00 Name: bmy_13516T0/1-786 Len: 894 Check: 6414 Weight: 1.00 Name: BACU001628/1-890 Len: 894 Check: 3673 Weight: 1.00 // 1 50 ENSP00000368356/1-890 MSANNSPPSA QKSVLPTAIP AVLPAASPCS SPKTGLSARL SNGSFSAPSL ENSTTRP00000006511/1-891 MSANNSPPSS QKSVIPATLP AVLPAPSPCS SPKTGLSARL SNGSFSAPSL ENSBTAP00000001474/1-893 MSANSSPPSA QKSVIPATLP AVLPAPSPCS SPKTGLSSRL SNGSFSAPSL bmy_13516T0/1-786 ---------- ---------- ---------- ---------- ---------- BACU001628/1-890 MSANNSPPSS QKSVIPATLP AVLPAPSPCS SPKTGLSARL SNGSFSAPSL 51 100 ENSP00000368356/1-890 TNSRGSVHTV SFLLQIGLTR ESVTIEAQEL SLSAVKDLVC SIVYQKFPEC ENSTTRP00000006511/1-891 TNSRGSVHTI SFLLQIGLTR ESITIEAQEL SLSAVKDLVC SIVYQKFPEC ENSBTAP00000001474/1-893 TNSRGSVHTV SFLLQIGLTR ESITIEAQEL SLSAVKDLVC SIVYQKFPEC bmy_13516T0/1-786 ---------- ---------- ---------- ---------- ---------- BACU001628/1-890 TNSRGSVHTI SFLLQIGLTR ESITIEAQEL SLSAVKDLVC SIVYQKFPEC 101 150 ENSP00000368356/1-890 GFFGMYDKIL LFRHDMNSEN ILQLITSADE IHEGDLVEVV LSALATVEDF ENSTTRP00000006511/1-891 GFFGMYDKIL LFRHDMNSEN ILQLITSAEE IHEGDLVEVV LSALATVEDF ENSBTAP00000001474/1-893 GFFGMYDKIL LFRHDMNSEN ILQLITSADE IHEGDLVEVV LSALATVEDF bmy_13516T0/1-786 ----MYDKIL LFRHDMNSEN ILQLITSADE IHEGDLVEVV LSALATVEDF BACU001628/1-890 GFFGMYDKIL LFRHDMNSEN ILQLITSADE IHEGDLVEVV LSALATVEDF 151 200 ENSP00000368356/1-890 QIRPHTLYVH SYKAPTFCDY CGEMLWGLVR QGLKCEGCGL NYHKRCAFKI ENSTTRP00000006511/1-891 QIRPHTLYVH SYKAPTFCDY CGEMLWGLVR QGLKCEGCGL NYHKRCAFKI ENSBTAP00000001474/1-893 QIRPHTLYVH SYKAPTFCDY CGEMLWGLVR QGLKCEGCGL NYHKRCAFKI bmy_13516T0/1-786 QIRPHTLYVH SYKAPTFCDY CGEMLWGLVR QGLKCEGCGL NYHKRCAFKI BACU001628/1-890 QIRPHTLYVH SYKAPTFCDY CGEMLWGLVR QGLKCEGCGL NYHKRCAFKI 201 250 ENSP00000368356/1-890 PNNCSGVRKR RLSNVSLPGP GLSVPRPLQP EYVALPSEES HVHQEPSKRI ENSTTRP00000006511/1-891 PNNCSGVRKR RLSNVSLPGP GLSVPRPLQT EYVALPTEES HVHQEPSKRI ENSBTAP00000001474/1-893 PNNCSGVRKR RLSNVSLPGP GLSVPRLLQT DYVALPTEES HVHQEPSKRI bmy_13516T0/1-786 PNNCSGVRKR RLSNVSLPGP GLSVPRPLQN EYVALPTEES HVHQEPSKRI BACU001628/1-890 PNNCSGVRKR RLSNVSLPGP GLSVPRPLQN EYVALPTEES HVHQEPSKRI 251 300 ENSP00000368356/1-890 PSWSGRPIWM EKMVMCRVKV PHTFAVHSYT RPTICQYCKR LLKGLFRQGM ENSTTRP00000006511/1-891 PSWSGRPIWM EKMVMCRVKV PHTFAVHSYT RPTICQYCKR LLKGLFRQGM ENSBTAP00000001474/1-893 PSWSGRPIWM EKMVMCRVKV PHTFAVHSYT RPTICQYCKR LLKGLFRQGM bmy_13516T0/1-786 PSWSGRPIWM EKMVMCRVKV PHTFAVHSYT RPTICQYCKR LLKGLFRQGM BACU001628/1-890 PSWSGRPIWM EKMVMCRVKV PHTFAVHSYT RPTICQYCKR LLKGLFRQGM 301 350 ENSP00000368356/1-890 QCKDCKFNCH KRCASKVPRD CLGEVTFNGE PSSLGTDTDI PMDIDNNDIN ENSTTRP00000006511/1-891 QCKDCKFNCH KRCASKVPRD CLGEVTFNGE PSTLGTDTDI PMDIDSSDMN ENSBTAP00000001474/1-893 QCKDCKFNCH KRCASKVPRD CLGEVTFNGE PSTLGTDTDI PMDIDSSDMN bmy_13516T0/1-786 QCKDCKFNCH KRCASKVPRD CLGEVTFNGE PSTLGTDTDI PMDIDSSDMN BACU001628/1-890 QCKDCKFNCH KRCASKVPRD CLGEVTFNGE PSTLGTDTDI PMDIDSSDMN 351 400 ENSP00000368356/1-890 SDSSRGLDDT EEPSPPEDKM FFLDPSDLDV ERDEEAVKTI SPSTSNNIPL ENSTTRP00000006511/1-891 SDGSRGLDDT EEPSPPEDKM FFLDPSDLDV ERDEEAVKTI SPSTSNNIPL ENSBTAP00000001474/1-893 SDGSRGLDDT EEPSPPEDKM FFLDPSDLDV ERDEEAVKTI SPSTSNNIPL bmy_13516T0/1-786 SDGSRGLDDT EEPSPPEDKM FFLDPSDLDV ERDEEAVKTI SPSTSNNIPL BACU001628/1-890 SDGSRGLDDT EEPSPPEDKM FFLDPSDLDV ERDEEAVKTI SPSTSNNIPL 401 450 ENSP00000368356/1-890 MRVVQSIKHT KRKSSTMVKE GWMVHYTSRD NLRKRHYWRL DSKCLTLFQN ENSTTRP00000006511/1-891 MRVVQSIKHT KRKSSTMVKE GWMVHYTSRD TLRKRHYWRL DSKCLTLFQN ENSBTAP00000001474/1-893 MRVVQSIKHT KRKSSTMVKE GWMVHYTSRD TLRKRHYWRL DSKCLTLFQN bmy_13516T0/1-786 MRVVQSIKHT KRKSSTMVKE GWMVHYTSRD TLRKRHYWRL DSKCLTLFQN BACU001628/1-890 MRVVQSIKHT KRKSSTMVKE GWMVHYTSRD TLRKRHYWRL DSKCLTLFQN 451 500 ENSP00000368356/1-890 ESGSKYYKEI PLSEILRISS PRDFTNISQG SNPHCFEIIT DTMVYFVGEN ENSTTRP00000006511/1-891 ESGSKYYKEI PLSEILRISS PQDFTNISQG SNPHCFEIIT DTMVYFVGEN ENSBTAP00000001474/1-893 ESGSKYYKEI PLSEILRISS PQDFTSISQG SNPHCFEIIT DTMVYFVGEN bmy_13516T0/1-786 ESGSKYYKEI PLSEILRISS PQDFTNISQG SNPHCFEIIT DTMVYFVGEN BACU001628/1-890 ESGSKYYKEI PLSEILRISS PQDFTNISQG SNPHCFEIIT DTMVYFVGEN 501 550 ENSP00000368356/1-890 NGDSSHNPVL AATGVGLDVA QSWEKAIRQA LMPVTPQASV CTSPGQGKDH ENSTTRP00000006511/1-891 SGDSSHNPVL AATGVGLDVA QSWEKAIRQA LMPVTPQASV CTSPGQGKDH ENSBTAP00000001474/1-893 NGDSSHNPVL AATGVGLDVA QSWEKAIRQA LMPVTPQASV CTSPGQGKDH bmy_13516T0/1-786 SGDSSHNPVL AATGVGLDVA QSWEKAIRQA LMPVTPQASV CTSPGQGKDH BACU001628/1-890 SGDSSHNPVL AATGVGLDVA QSWEKAIRQA LMPVTPQASV CTSPGQGKDH 551 600 ENSP00000368356/1-890 KDLSTSISVS NCQIQENVDI STVYQIFADE VLGSGQFGIV YG---GKHRK ENSTTRP00000006511/1-891 KDLSTSISVS NCQIQENVDI STVYQIFADE VLGSGQFGIV YG---GKHRK ENSBTAP00000001474/1-893 KDLSTSISVS NCQIQENVDI STVYQIFADE VLGSGQFGIV YGGKIGKHRK bmy_13516T0/1-786 KDLSTSISVS NCQIQENVDI STVYQIFADE VLGSGQFGIV YG---GKHRK BACU001628/1-890 KDLSTSISVS NCQIQENVDI STVYQIFADE VLGSGQFGIV YG---GKHRK 601 650 ENSP00000368356/1-890 TGRDVAIKVI DKMRFPTKQE SQLRNEVAIL QNLHHPGIVN LECMFETPER ENSTTRP00000006511/1-891 TGRDVAIKVI DKMRFPTKQE SQLRNEVAIL QNLHHPGIVN LECMFETPER ENSBTAP00000001474/1-893 TGRDVAIKVI DKMRFPTKQE SQLRNEVAIL QNLHHPGIVN LECMFETPER bmy_13516T0/1-786 TGRDVAIKVI DKMRFPTKQE SQLRNEVAIL QNLHHPGIVN LECMFETPER BACU001628/1-890 TGRDVAIKVI DKMRFPTKQE SQLRNEVAIL QNLHHPGIVN LECMFETPER 651 700 ENSP00000368356/1-890 VFVVMEKLHG DMLEMILSSE KSRLPERITK FMVTQILVAL RNLHFKNIVH ENSTTRP00000006511/1-891 VFVVMEKLHG DMLEMILSSE KSRLPERITK FMVTQILVAL RNLHFKNIVH ENSBTAP00000001474/1-893 VFVVMEKLHG DMLEMILSSE KSRLPERITK FMVTQILVAL RNLHFKNIVH bmy_13516T0/1-786 VFVVMEKLHG DMLEMILSSE KSRLPERITK FMVTQILVAL RNLHFKNIVH BACU001628/1-890 VFVVMEKLHG DMLEMILSSE KSRLPERITK FMVTQILVAL RNLHFKNIVH 701 750 ENSP00000368356/1-890 CDLKPENVLL ASAEPFPQVK LCDFGFARII GEKSFRRSVV GTPAYLAPEV ENSTTRP00000006511/1-891 CDLKPENVLL ASAEPFPQVK LCDFGFARII GEKSFRRSVV GTPAYLAPEV ENSBTAP00000001474/1-893 CDLKPENVLL ASAEPFPQVK LCDFGFARII GEKSFRRSVV GTPAYLAPEV bmy_13516T0/1-786 CDLKPENVLL ASAEPFPQVK LCDFGFARII GEKSFRRSVV GTPAYLAPEV BACU001628/1-890 CDLKPENVLL ASAEPFPQVK LCDFGFARII GEKSFRRSVV GTPAYLAPEV 751 800 ENSP00000368356/1-890 LRSKGYNRSL DMWSVGVIIY VSLSGTFPFN EDEDINDQIQ NAAFMYPPNP ENSTTRP00000006511/1-891 LRSKGYNRSL DMWSVGVIVY VSLSGTFPFN EDEDINDQIQ NAAFMYPPNP ENSBTAP00000001474/1-893 LRSKGYNRSL DMWSVGVIVY VSLSGTFPFN EDEDINDQIQ NAAFMYPPNP bmy_13516T0/1-786 LRSKGYNRSL DMWSVGVIVY VSLSGTFPFN EDEDINDQIQ NAAFMYPPNP BACU001628/1-890 LRSKGYNRSL DMWSVGVIVY VSLSGTFPFN EDEDINDQIQ NAAFMYPPNP 801 850 ENSP00000368356/1-890 WREISGEAID LINNLLQVKM RKRYSVDKSL SHPWLQDYQT WLDLREFETR ENSTTRP00000006511/1-891 WREISGEAID LINNLLQVKM RKRYSVDKXX XXXXXXDYQT WLDLREFETR ENSBTAP00000001474/1-893 WREISGEAID LINNLLQVKM RKRYSVDKSL SHPWLQDYQT WLDLREFETR bmy_13516T0/1-786 WREISGEAID LINNLLQVKM RKRYSVDKSL SHPWLQDYQT WLDLREFETR BACU001628/1-890 WREISGEAID LINNLLQVKM RKRYSVDKSL SHPWLQDYQT WLDLREFETR 851 900 ENSP00000368356/1-890 IGERYITHES DDARWEIHAY THNLVYPKHF IMAPNPDDME EDP- ENSTTRP00000006511/1-891 IGERYITHES DDARWEIHAY THNLVYPKHF IMAPNPDDME EDPL ENSBTAP00000001474/1-893 IGERYITHES DDARWEIHAY THNLVYPKHF IMAPNPDDME EDP- bmy_13516T0/1-786 IGERYITHES DDARWEIHAY THNLVYPKHF IMAPNPDDME EDP- BACU001628/1-890 IGERYITHES DDARWEIHAY THNLVYPKHF IMAPNPDDME EDP-