KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:28 2014 Check: 00 .. Name: ENSTTRP00000015481/1-627 Len: 694 Check: 4948 Weight: 1.00 Name: ENSP00000378328/1-626 Len: 694 Check: 9060 Weight: 1.00 Name: ENSBTAP00000001489/1-629 Len: 694 Check: 3244 Weight: 1.00 Name: bmy_00138T0/1-673 Len: 694 Check: 5434 Weight: 1.00 Name: BACU010484/1-629 Len: 694 Check: 4545 Weight: 1.00 // 1 50 ENSTTRP00000015481/1-627 MIPANASARK GSEGKYPLHY LVWHNRHREL EKEVRAGQVD IEQLDPRGRT ENSP00000378328/1-626 MIPANASARK GPEGKYPLHY LVWHNRHREL EKEVRAGQVD IEQLDPRGRT ENSBTAP00000001489/1-629 MIPANASARK GPEGKYPLHY LVWHNRHREL EKEVRAGQVD IEQLDPRGRT bmy_00138T0/1-673 MIPANASARK GPEGKYPLHY LVWHNRHREL EKEVRAGQVD IEQLDPRGRT BACU010484/1-629 MIPANASARK GPEGKYPLHY LVWHNRHREL EKEVRAGQVD IEQLDPRGRT 51 100 ENSTTRP00000015481/1-627 PLHLATTLGH LECARVLLAH GADVGRENRS GWTVLQEAVS TRDLELVQLV ENSP00000378328/1-626 PLHLATTLGH LECARVLLAH GADVGRENRS GWTVLQEAVS TRDLELVQLV ENSBTAP00000001489/1-629 PLHLATTLGH LECARVLLAH GADVGRENRS GWTVLQEAVS TRDLELVQLV bmy_00138T0/1-673 PLHLATTLGH LECARVLLAH GADVGRENRS GWTVLQEAVS TRDLELVQLV BACU010484/1-629 PLHLATTLGH LECARVLLAH GADVGRENRS GWTVLQEAVS TRDLELVQLV 101 150 ENSTTRP00000015481/1-627 LRYRDYQRVV KRLAGIPVLL EKLRKAQDFY VEMKWEFTSW VPLVSKICPS ENSP00000378328/1-626 LRYRDYQRVV KRLAGIPVLL EKLRKAQDFY VEMKWEFTSW VPLVSKICPS ENSBTAP00000001489/1-629 LRYRDYQRVV KRLAGIPVLL EKLRKAQDFY VEMKWEFTSW VPLVSKICPS bmy_00138T0/1-673 LRYRDYQRVV KRLAGIPVLL EKLR------ ---------- -----KICPS BACU010484/1-629 LRYRDYQRVV KRLAGIPVLL EKLRKAQDFY VEMKWEFTSW VPLVSKICPS 151 200 ENSTTRP00000015481/1-627 DTYKVWKSGQ NLRVDTTLLG FDHMTWQRGN RSFVFRGQDT SAVAMEIDHD ENSP00000378328/1-626 DTYKVWKSGQ NLRVDTTLLG FDHMTWQRGN RSFVFRGQDT SAVVMEIDHD ENSBTAP00000001489/1-629 DTYKVWKSGQ NLRVDTTLLG FDHMTWQRGN RSFIFRGQDA SAVVMEIDHD bmy_00138T0/1-673 DTYKVWKSGQ NLRVDTTLLG FDHMTWQRGN RSFVFRGQDT SAVVMEIDHD BACU010484/1-629 DTYKVWKSGQ NLRVDTTLLG FDHMTWQRGN RSFVFRGQDT SAVVMEIDHD 201 250 ENSTTRP00000015481/1-627 RRVVYTETLA LAGQDRELLL AAAQPTEEQV LSRLTAPVVT TQLDTKNISF ENSP00000378328/1-626 RRVVYTETLA LAGQDRELLL AAAQPTEEQV LSRLTAPVVT TQLDTKNISF ENSBTAP00000001489/1-629 RRVVYTETLA LAGQDRELLL AAAQPTEEQV LSRLTAPVVT TQLDTKNISF bmy_00138T0/1-673 RRVVYTETLA LAGQDRELLL AAAQPTEEQV LSRLTAPVVT TQLDTKNISF BACU010484/1-629 RRVVYTETLA LAGQDRELLL AAAQPTEEQV LSRLTAPVVT TQLDTKNISF 251 300 ENSTTRP00000015481/1-627 ERNKTGILGW RSEKTEMVNG YEAKVYGASN VELITRTRTE HLSEQHKGKV ENSP00000378328/1-626 ERNKTGILGW RSEKTEMVNG YEAKVYGASN VELITRTRTE HLSEQHKGKV ENSBTAP00000001489/1-629 ERNKTGILGW RSEKTEMVNG YEAKVYGASN VELITRTRTE HLSEQHKGKV bmy_00138T0/1-673 ERNKTGILGW RSEKTEMVNG YEAKVYGASN VELITRTRTE HLSEQHKGKV BACU010484/1-629 ERNKTGILGW RSEKTEMVNG YEAKVYGASN VELITRTRTE HLSEQHKGKV 301 350 ENSTTRP00000015481/1-627 KGCKTPLQSF LGIAEQHGGP QNGTLITQTL SQANPTAITA EEYFNPNFEL ENSP00000378328/1-626 KGCKTPLQSF LGIAEQHGGP QNGTLITQTL SQANPTAITA EEYFNPNFEL ENSBTAP00000001489/1-629 KGCKTPLQSF LGIAEQHGGP QNGTLITQTL SQANPTAITA EEYFNPNFEL bmy_00138T0/1-673 KGCKTPLQSF LGIAEQHGGP QNGTLITQTL SQANPTAITA EEYFNPNFEL BACU010484/1-629 KGCKTPLQSF LGIAEQHGGP QNGTLITQTL SQANPTAITA EEYFNPNFEL 351 400 ENSTTRP00000015481/1-627 GNRDMGRPME LTTKTQKFKA KLWLCEEHPL SLCEQVAPII DLMAVSNALF ENSP00000378328/1-626 GNRDMGRPME LTTKTQKFKA KLWLCEEHPL SLCEQVAPII DLMAVSNALF ENSBTAP00000001489/1-629 GNRDMGRPME LTTKTQKFKA KLWLCEEHPL SLCEQVAPII DLMAVSNALF bmy_00138T0/1-673 GNRDMGRPME LTTKTQKFKA KLWLCEEHPL SLCEQVAPII DLMAVSNALF BACU010484/1-629 GNRDMGRPME LTTKTQKFKA KLWLCEEHPL SLCEQVAPII DLMAVSNALF 401 450 ENSTTRP00000015481/1-627 AKLRDFITLR LPPGFPVKIE IPIFHILNAR ITFENLNGCD EPVPLVRGSP ENSP00000378328/1-626 AKLRDFITLR LPPGFPVKIE IPIFHILNAR ITFGNLNGCD EPVPSVRGSP ENSBTAP00000001489/1-629 AKLRDFITLR LPPGFPVKIE IPIFHILNAR ITFGNLNGCD EPVPLVRGSP bmy_00138T0/1-673 AKLRDFITLR LPPGFPVKIE IPIFHILNAR ITFGNLNGCD EPVPLVRGSP BACU010484/1-629 AKLRDFITLR LPPGFPVKIE IPIFHILNAR ITFGNLNGCD EPVPLVRGSP 451 500 ENSTTRP00000015481/1-627 SSETPSPGSD SSSVSSSSST T--------- ---------- ---------- ENSP00000378328/1-626 SSETPSPGSD SSSVSSSSST T--------- ---------- ---------- ENSBTAP00000001489/1-629 SSETPSPGSD SSSVSSSSST T--------- ---------- ---------- bmy_00138T0/1-673 SSETPSPGSD SSSVSSSSST SETLSRPEPA LTSPPHRALP REWPGGEVWS BACU010484/1-629 SSETPSPGSD SSSVSSSSST T--------- ---------- ---------- 501 550 ENSTTRP00000015481/1-627 ---------- SCRGCEISPA LFEAPRGYSV LGGQREAATR DDDDDLLQFA ENSP00000378328/1-626 ---------- SCRGCEISPA LFEAPRGYSM MGGQREAATR DDDDDLLQFA ENSBTAP00000001489/1-629 ---------- SCRGCEISPA LFEAPRGYSV LGGQREATTR DDDDDLLQFA bmy_00138T0/1-673 TLTHSPAPPA SCRGCEISPT LFEAPRGYSV LGGQREATTR DDDDDLLQFA BACU010484/1-629 ---------- SCRGCEISPT LFEAPRGYSV LGGQREATTR DDDDDLLQFA 551 600 ENSTTRP00000015481/1-627 IQQSLLEAGS EYD------- ---------- ---------Q VTIWEALTNS ENSP00000378328/1-626 IQQSLLEAGS EYD------- ---------- ---------Q VTIWEALTNS ENSBTAP00000001489/1-629 IQQSLLEAGS EYD------- ---------- ---------Q VTIWEALTNS bmy_00138T0/1-673 IQQSLLEAGS EYDQVRPRGR TGPLDCGAAT ANWLTPASAQ VTIWEALTNS BACU010484/1-629 IQQSLLEAGS EYD------- ---------- ---------Q VTIWEALTNS 601 650 ENSTTRP00000015481/1-627 KPGTHPMSYE GRRQDXXXXX XXXXXXXXXX --XXXXXXXX XXXXXXXXXX ENSP00000378328/1-626 KPGTHPMSYE GRRQDRSAPP TPQRQPAPP- --ASVPSPRP SSGPGSGGHV ENSBTAP00000001489/1-629 KPGTHPMSYE GRRQDRSAPP TPQRQPVPRA ALASVPSPRP SPRPGPGGHV bmy_00138T0/1-673 KPGTHPMSYE GRRQDRSAPP TPQRQSTTPA GLASVPSPRP SPRPGQGGHV BACU010484/1-629 KPGTHPMSYE GRRKDRTAPP TPQRQSTTPA GLASVPSPRP SPRPGQGGHV 651 700 ENSTTRP00000015481/1-627 XXXXXXXXXX XQELSAQEQE ERRRRARQEE EELERILRLS LTEQ ENSP00000378328/1-626 FRSYDEQLRL AMELSAQEQE ERRRRARQEE EELERILRLS LTEQ ENSBTAP00000001489/1-629 FRSYDEQLRL AMELSAQEQE ERRRRARQEE EELERILRLS LTEQ bmy_00138T0/1-673 FRSYDEQLRL AMELSAQEQE ERRRRARQEE EELERILRLS LTEQ BACU010484/1-629 FRSYDEQLRL AMELSAQEQE ERRRRARQEE EELERILRLS LTEQ