KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:14:30 2014 Check: 00 .. Name: ENSP00000256412/1-470 Len: 528 Check: 7296 Weight: 1.00 Name: ENSBTAP00000001496/1-477 Len: 528 Check: 2887 Weight: 1.00 Name: bmy_00914T0/1-325 Len: 528 Check: 1104 Weight: 1.00 Name: ENSTTRP00000010590/1-469 Len: 528 Check: 8440 Weight: 1.00 // 1 50 ENSP00000256412/1-470 ---------- -MLRGISQL- ---------- ---------- ---------- ENSBTAP00000001496/1-477 IKLDNWSDHN FVLSRTSQL- ---------- ---------- ---------- bmy_00914T0/1-325 ----EVGEDK TGQLGKPNLH VVWDVSATYS SQHVFGPAFH PLAHRSSSSF ENSTTRP00000010590/1-469 ---------- -MLCGMSQL- ---------- ---------- ---------- 51 100 ENSP00000256412/1-470 --PAVATMSW VLLPVLWLIV QTQAIAIKQT PELTLHEIVC PKKLHILHKR ENSBTAP00000001496/1-477 --PAVVSMSL VLLSILCLII QTQAITIRQT LESELYEVVH PKKLHILHKR bmy_00914T0/1-325 KKPTNKNLNF VSITSLSL-- ---AIAIKPT PELEPYEVVR PKKLHILHKR ENSTTRP00000010590/1-469 --PTVASMSL VLLSTLWLIV QAQAIAIKQT PELEPYEVVH PKKLHILHKR 101 150 ENSP00000256412/1-470 EIKNNQTEKH GKEERYEPEV QYQMILNGEE IILSLQKTKH LLGPDYTETL ENSBTAP00000001496/1-477 EIQNNQKEKH GKEERYEPEL QYQMMLNGEE VILSLQKAEH LLGPDYTETY bmy_00914T0/1-325 EIQNNQTEKH GKEERYEPEL QYQMILNGEE VILCLQKAKH LLGPDYTETY ENSTTRP00000010590/1-469 EIQNNQTEKH GKEERYEHEL QYQMILNGEE VILCLQKAEH LLGPDYLETY 151 200 ENSP00000256412/1-470 YSPRGEEITT KPENMEHCYY KGNILNEKNS VASISTCDGL RGYFTHHHQR ENSBTAP00000001496/1-477 YSPGGEEITT RPQNMEHCYY KGHILNEKDS VASISTCDGL RGYFTHHNQR bmy_00914T0/1-325 YSPRGEKITT SPQNMEHCYY KGHVLNEKDS VASICTCDGL RGYFTHHNQR ENSTTRP00000010590/1-469 YSPTGEKITT SPQNMEHCYY KGHVLNEKDS VASICTCDGL RGYFTHHNQR 201 250 ENSP00000256412/1-470 YQIKPLKSTD EKEHAVFTSN QEEQDPANHT CGVKSTDGKQ GPIRISRSLK ENSBTAP00000001496/1-477 YMIKPLKSTG REEHAILRYN QEELNPANHT CGVRNVGRKQ DLIRTSRSLR bmy_00914T0/1-325 YMIKPLKITD QEEHAVLIYN QEELDPANHT CGVRNVGRKQ GLIRTSRSLK ENSTTRP00000010590/1-469 YMIKPLKSTD QEEHAVLIYN QEELDPANHT CGVRNVGRKQ GLIRTSRSLK 251 300 ENSP00000256412/1-470 SPE------- ------KEDF LRAQKYIDLY LVLDNAFYKN YNENLTLIRS ENSBTAP00000001496/1-477 SPE------- ------IEEF LQGEKYIDLL LVLDNAFYKM YNENITVIRS bmy_00914T0/1-325 RPEVEDIINN VLSLFVKKDF LQAEKYIDLF LVLDNAFYNM YNRNITLIRS ENSTTRP00000010590/1-469 RP-------- ------KKDF LQAKKYIDLF LVLDNAFYNM YNRNVTLIRS 301 350 ENSP00000256412/1-470 FVFDVMNLLN VIYNTIDVQV ALVGMEIWSD GDKIKVVPSA STTFDNFLRW ENSBTAP00000001496/1-477 FVFDVINLLN VIYNTIDIQV SLVGMEIWSN SDKIKVVPST AVTFKNFLNW bmy_00914T0/1-325 FVFDVINLLN VV-------- ---------- ---------- RYLFSKHIFP ENSTTRP00000010590/1-469 FLFDVINLLN VMYNTIDVQV VLIGMEVWSD GDKIKVVPNT AVTFENFLNW 351 400 ENSP00000256412/1-470 HSSNLGK-KI HDHAQLLSGI SFNNRRVGLA ASNSLCSPSS VAVIEAKKKN ENSBTAP00000001496/1-477 HYSNLGKMKT HDHAQLLSGV GFKTRMAGLA TSNSLCSPSS VAVIEGKRKN bmy_00914T0/1-325 HRS------- ---------- ---------- ---------- ---------- ENSTTRP00000010590/1-469 HRSNLGKMKI HDHAQLLTGV GFKNRITALA ALNSLCSPSS VAVIEGKRKN 401 450 ENSP00000256412/1-470 NVALVGVMSH ELGHVLGMPD VPFNTKCPSG SCVMNQYLSS KFPKDFSTSC ENSBTAP00000001496/1-477 SVSLVGVMSH ELGHVLGMPD VPHNTKCPSG SCVMNKYLSS KFPKDFSTVS bmy_00914T0/1-325 ---------- -----LGLP- ---------- ---------- ---------- ENSTTRP00000010590/1-469 SVSLAGVMAH ELGHALGMPD VPYNTKCLSG SCVMNEYLSS KFPKDFSTVS 451 500 ENSP00000256412/1-470 RAHFERYLLS QKPKCLLQAP IPTNIMTTPV CGNHLLEVGE DCDCGSPKEC ENSBTAP00000001496/1-477 RSHFKKYMLS QKPRCLLQAL VPKNMT-KPV CGNQLLEVGE DCDCGSPEEC bmy_00914T0/1-325 ------YVFT K--------- ---------- ---------- ---------- ENSTTRP00000010590/1-469 RSHFKKYILS QKPSCLLKTL VPKNMTIKPV CGNQLLEVGE VCDCGSPEEC 501 550 ENSP00000256412/1-470 TNLCCEALTC KLKPGTDCGG DAPNHTTE ENSBTAP00000001496/1-477 TNPCCEAMTC MLKHEVDCGK ET-EQ--- bmy_00914T0/1-325 ---------- ---------- -------- ENSTTRP00000010590/1-469 ANPCCDATTC MLKPEADCGK NS-NHNTE