KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:30 2014 Check: 00 .. Name: bmy_18263T0/1-261 Len: 350 Check: 5547 Weight: 1.00 Name: ENSBTAP00000001499/1-350 Len: 350 Check: 4786 Weight: 1.00 Name: ENSP00000269439/1-346 Len: 350 Check: 902 Weight: 1.00 Name: BACU017644/1-184 Len: 350 Check: 1010 Weight: 1.00 Name: ENSTTRP00000013315/1-308 Len: 350 Check: 6300 Weight: 1.00 // 1 50 bmy_18263T0/1-261 ---------- ---------- --APFQRSQH PHATSCRHFH LGPPQPQQLA ENSBTAP00000001499/1-350 QTLTRLDYIF SCVVVGSVTS PGAPFQRSQL PHATSCRHFH LGPPQPQQLA ENSP00000269439/1-346 MVLVHVGY-L VLPVFGSVRN RGAPFQRSQH PHATSCRHFH LGPPQPQQLA BACU017644/1-184 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013315/1-308 MVLVHVGY-F VLPVFGSVRN RGAPFQRSQH PHATSCRHFH LGPPQPQQLA 51 100 bmy_18263T0/1-261 PDFPLAHPVQ SQPGLSAHMA PAHQHSGALH QSLTPLPTLQ FQDVTGPSFL ENSBTAP00000001499/1-350 PDFPLAHPVQ SQPGLSAHMA PAHQHSGALH QSLTPLPTLQ FQDVTGPSFL ENSP00000269439/1-346 PDFPLAHPVQ SQPGLSAHMA PAHQHSGALH QSLTPLPTLQ FQDVTGPSFL BACU017644/1-184 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013315/1-308 PDFPLAHPVQ SQPGLSAHMA PAHQHSGALH QSLTPLPTLQ FQDVTGPSFL 101 150 bmy_18263T0/1-261 PQALHQQYLL QQQLLEAQHR RLLSHP--RR SQERVSVHPH RLHPSFDFGH ENSBTAP00000001499/1-350 PQALHQQYLL QQQLLEAQHR RLVSHPRCRR SQERVSVHPH RLHPSFDFGH ENSP00000269439/1-346 PQALHQQYLL QQQLLEAQHR RLVSHP--RR SQERVSVHPH RLHPSFDFG- BACU017644/1-184 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013315/1-308 PQALHQQYLL QQQLLEAQHR RLLSHP--RR SQERVSVHPH RLHPSFDFGH 151 200 bmy_18263T0/1-261 QLQTPQPRYL AEGTDWDLSV DTGLSPAQFQ VRPMPQHYQH YLATPRMHHF ENSBTAP00000001499/1-350 QLQTPQPRYL AEGTDWDLSV DAGLSSAQFQ VRPVPQHYQH YLATLRMHHF ENSP00000269439/1-346 QLQTPQPRYL AEGTDWDLSV DAGLSPAQFQ VRPIPQHYQH YLATPRMHHF BACU017644/1-184 ---------- ------DLSV DTGLSPAQFQ VRPMPQHYQH YLATPRMHHF ENSTTRP00000013315/1-308 QLQTPQPRYL AEGTDWDLSV DTGLSPAQFQ VRPMPQHYQH YLATPRMHHF 201 250 bmy_18263T0/1-261 PRNSSSTQMV VHEIRNYPYP QLHFLALQGL NASRHTSAVR ESYEELLQLE ENSBTAP00000001499/1-350 PRNSSSTQMV VHEIRNYPYP QLHFLALQGL NPSRHTSAVR ESYEELLQLE ENSP00000269439/1-346 PRNSSSTQMV VHEIRNYPYP QLHFLALQGL NPSRHTSAVR ESYEELLQLE BACU017644/1-184 PRNSSSTQMV VHEIRNYPYP QLHFLALQGL NASRHTSAVR ESYEELLQLE ENSTTRP00000013315/1-308 PRNSSSTQMV VHEIRNYPYP QLHFLALQGL NASRHTSAVR DSYEELLQLE 251 300 bmy_18263T0/1-261 DRLGNVTRGA VQNTIERFTF PHKYKKVSQP AGQPA----- ---------- ENSBTAP00000001499/1-350 DRLGNVTRGA VQNTIERFTF PHKYKKRRPQ DGKGKKEEGE ESDTDEKCTI ENSP00000269439/1-346 DRLGNVTRGA VQNTIERFTF PHKYKKRRPQ DGKGKKDEGE ESDTDEKCTI BACU017644/1-184 DRLGNVTRGA VQNTIERFTF PHKYKKRRPQ DSKGKKEEGE ESDTDEKCTI ENSTTRP00000013315/1-308 DRLGNVTRGA VQNTIERFTF PHKYKKRRPQ DGKGKKEEGE ESDTDEKCTI 301 350 bmy_18263T0/1-261 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001499/1-350 CLSLLEDGED VRRLPCMHLF HQLCVDQWLA MSKKCPICRV DIETQLGADS ENSP00000269439/1-346 CLSMLEDGED VRRLPCMHLF HQLCVDQWLA MSKKCPICRV DIETQLGADS BACU017644/1-184 CLSLLEDGED VRRLPCMHLF HQLCVDQWLA MSKKCPICRV DIETQLGADS ENSTTRP00000013315/1-308 CLSLLEDGED V--------- ---------- ---------- ----------