KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:30 2014 Check: 00 .. Name: ENSP00000376608/1-458 Len: 490 Check: 6030 Weight: 1.00 Name: ENSTTRP00000015399/1-445 Len: 490 Check: 6366 Weight: 1.00 Name: ENSBTAP00000001505/1-366 Len: 490 Check: 1117 Weight: 1.00 Name: bmy_02191T0/1-323 Len: 490 Check: 7858 Weight: 1.00 Name: BACU010023/1-441 Len: 490 Check: 3617 Weight: 1.00 // 1 50 ENSP00000376608/1-458 MSILIIEAFY GGSHKQLVDL LQEELGDCVV YTLPAKKWHW RARTSALYFS ENSTTRP00000015399/1-445 ------EAFY GGSHKQLVDL LQEELEHCVL YTLPAKKWHW RARTSALYFS ENSBTAP00000001505/1-366 MSILILEAFY GGSHKQLVDL LQEELEDSVL YTLPAKKWHW RARTSALYFS bmy_02191T0/1-323 ---------- ---------- ---------- ---------- ---MHVLSFS BACU010023/1-441 MSILIIEAFC GGSHKQLVDL LQEELEYCVL YTLPAKKWHW RARTSALYFS 51 100 ENSP00000376608/1-458 QTIPISEHYR TLFASSVLNL TELAALRPDL GKLKKILYFH ENQLIYPVKK ENSTTRP00000015399/1-445 QNIPASEHYR ILFASSVLNL TELAALRPDL GKLKKILYFH ENQLVYPVKK ENSBTAP00000001505/1-366 QNIPTSEHYR ILFASSVLNL TELAALRPDL GKLKKILYFH ENQLVYPVKK bmy_02191T0/1-323 SHTPQ----- ---------- ---------- ---------- ---------- BACU010023/1-441 QNIPASEHYR ILFASSVLNL TELAALRPDL GKLKKILYFH ENQLVYPVKK 101 150 ENSP00000376608/1-458 CQERDFQYGY NQILSCLVAD VVVFNSVFNM ESFLTSMGKF MKLIPDHRPK ENSTTRP00000015399/1-445 CQERDFQYGY NQILSXXXXX XXXXXXXXXX XXXXXXXXXX XXLIPDHRPK ENSBTAP00000001505/1-366 CQERDFQYGY NQILSCLVAD VVVFNSVFNM ESFLTSIGKF MKLIPDHRPK bmy_02191T0/1-323 ---------- ---------- ---------- ---------- ---------- BACU010023/1-441 CQERDFQYGY NQILSCLVAD VVVFNSVFNM ESFLTSIGKF MKLIPDHRPK 151 200 ENSP00000376608/1-458 DLESIIRPKC QVIYFPIRFP DVSRFMPKHK TTHLKKMLGL KGNGGAVLSM ENSTTRP00000015399/1-445 DLESVIRPKC QVIYFPIRFP DVSRFMPRHK AAHLQKIPSL KGNGGVAPSM ENSBTAP00000001505/1-366 DLESIIRPKC QVIYFPIRFP DVSRFMPKHK AAHLQKILSL KENGGNAPST bmy_02191T0/1-323 ---------- ---------- --SRFMPKHK AAHLQKILSL KGNGGVAPSM BACU010023/1-441 DLESIIRPKC QVIYFPIRFP DVSRFMPKHK AAHLQKILSL KGNGGVAPSM 201 250 ENSP00000376608/1-458 ALPFQPEQRD SEDLLKNFNS ECDTHCGLDT ARQEYLGNSL RQESDLKKST ENSTTRP00000015399/1-445 ALPFQQEQRG SENLLKNVDS ESGS-C--DA AQQENLGGSV RQESYLKTFS ENSBTAP00000001505/1-366 ALPFQQQLRG SENLLKSFDS KSGP-C--DA AQQESLGCSV RQASYLKTFN bmy_02191T0/1-323 ALPFQQKQRG SENLLKNFDS ESGS-C--DA AQQENLGRSV RQESYLKTFS BACU010023/1-441 ALPFQQEQRG SENLLKNFDS ESGS-C--DA AQQENLGRSV RQESYLKTFS 251 300 ENSP00000376608/1-458 SSDNSSSHHG ENKQNLTVDP CDILGGVDNQ QRLLHIVWPH RWEHDKDPES ENSTTRP00000015399/1-445 SSDNSSTHHG EHKQN----P CNIWAGADDQ QRPLHIVWPH RWEHDKDPES ENSBTAP00000001505/1-366 SSDDSSTHHG EHKQN----R CDVLAEADDQ QRPLHIVWPH RW-------- bmy_02191T0/1-323 SSDNSSTHHG EHKQN----P CNXLAGADDQ QRPLHIVWPH RWEHDKDPES BACU010023/1-441 SSDNSSTHHG EHKPN----P CNILAGADDQ QRPLHIVWPH RWEHDKDPES 301 350 ENSP00000376608/1-458 FFKVLMHLKD LGLNFHVSVL GETFTDVPDI FSEAKKALGS SVLHWGYLPS ENSTTRP00000015399/1-445 FFKVLMHLKD LGLNFHVSVL GETFTDVPGI FSESKKALGS SVLHWGYLPS ENSBTAP00000001505/1-366 ---------- ---------- ---------- ---------- ---------- bmy_02191T0/1-323 FFKVLMHLKD LGLNFHVSVL GETFTDVPGI FSESKKALGS SVLHWGYLPS BACU010023/1-441 FFKVLMHLKD LGLNFHVSVL GETFTDVPGI FSESKKALGS SVLHWGYLPS 351 400 ENSP00000376608/1-458 KDDYFQVLCM ADVVISTAKH EFFGVAMLEA VYCGCYPLCP KDLVYPEIFP ENSTTRP00000015399/1-445 KDEYFQVLCT ADVVISTAKH EFFGVAMLEA VYCGCYPLCP KDLVYPEIFP ENSBTAP00000001505/1-366 ---------- ---------- -------LEA VYCGCYPLCP KDLVYPEIFP bmy_02191T0/1-323 KDEYFQVLCT ADVVISTAKH EFFGVAMLEA VYCGCYPLCP KDLVYPEIFP BACU010023/1-441 KDEYFQVLCT ADVVISTAKH EFFGVAMLEA VYCGCYPLCP KDLVYPEIFP 401 450 ENSP00000376608/1-458 AEYLYSTPEQ LSKRLQNFCK RPDIIRKHLY KGEIAPF--- ---------- ENSTTRP00000015399/1-445 AEYLYSTPEQ LSKRLQNFCK RPDIVRKHLY KGEIAPF--- ---------- ENSBTAP00000001505/1-366 AEYLYSTPEQ LSKRLQNFCK RPDITRKHLY KGEMAPF--- ---------- bmy_02191T0/1-323 AEYLYSTPEQ LSKRLQNFCK RPDIVRKHLY KCKCVHLSVC FSLNTLLVSE BACU010023/1-441 AEYLYSTPEQ LSKRLQNFCK RPDIVRKHLY K-----M--- ---------- 451 500 ENSP00000376608/1-458 ------SWAA LHGKFRSLLT ---------- ---TEPREDL ENSTTRP00000015399/1-445 ------SWAA LHGKFRSLLT ---------- ---AEPREDL ENSBTAP00000001505/1-366 ------SWAA LHGKFRSLLT ---------- ---AEPREDL bmy_02191T0/1-323 TTNTIVSFPD EQGSVLQMLV RYYDISKIFF AFWKAGGKHL BACU010023/1-441 ------TQIE EQTTKRS--- ---------- -----KRRHE