KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:14:31 2014 Check: 00 ..
Name: ENSBTAP00000001507/1-876 Len: 1471 Check: 118 Weight: 1.00
Name: ENSP00000314491/1-876 Len: 1471 Check: 2339 Weight: 1.00
Name: ENSTTRP00000010529/1-875 Len: 1471 Check: 973 Weight: 1.00
Name: BACU012066/1-924 Len: 1471 Check: 594 Weight: 1.00
Name: bmy_16126T0/1-1419 Len: 1471 Check: 6467 Weight: 1.00
//
1 50
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 MSGPTWLPPK QPEPARAPQG RGLPRGASGP PAAHGAGAGV GAWGRGEEGP
51 100
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 KTAASTSVTL SFPNPTFALS SLNPALQPHP RVNFCPLPSE QCYQAPGGPE
101 150
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 DRGLAWVGCH GAPQRSQGLP ADRGGLRPGS LDAEIDSLTS MLAELDGGRG
151 200
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 HAPRRPDRQA YEPPQPPAYR SGSGSLKPNG GGVPPPPLPA SPYGGPTPAS
201 250
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 YATASTPAGP AFPVQVKVAQ PVRGCGPPRR GASQASGPLP GPHFPLPGRG
251 300
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 EVWGAGYRSH REPGPGGKEE AAGVSSSAGG RGGGYGSQVP LSQPPEEELE
301 350
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 RLTKKLVHDM NHPPSGEYFG RCGGCGEDVV GDGAGVVALD RVFHVGCFVC
351 400
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 STCRAQLRGQ HFYAVERRAY CESCYVATLE KCSTCSQPIL DRILRAMGKA
401 450
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 YHPGCFTCVV CHRGLDGIPF TVDATSQIHC IEDFHRKFAP RCSVCGGAIM
451 500
ENSBTAP00000001507/1-876 ---------- ---------- ---------- ---------- ----------
ENSP00000314491/1-876 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000010529/1-875 ---------- ---------- ---------- ---------- ----------
BACU012066/1-924 ---------- ---------- ---------- ---------- ----------
bmy_16126T0/1-1419 PEPGQEETVR IVALDRSFHI GCYKCEECGL LLSSEGECQG CYPLDGHILC
501 550
ENSBTAP00000001507/1-876 ---------- ---------- MGDSDDEYDR RRRDKFRRER SDYDRSRERD
ENSP00000314491/1-876 ---------- ---------- MGDSDDEYDR RRRDKFRRER SDYDRSRERD
ENSTTRP00000010529/1-875 ---------- ---------- MGDSDDEYDR -RRDKFRRER SDYDRSRSYD
BACU012066/1-924 ---------- ---------- MGDSDDEYDR RRRDKFRRER SDYDRSRERD
bmy_16126T0/1-1419 KACSAWRIQE LSATAPSFRA MGDSDDEYDR RRRDKFRRER SDYDRSRERD
551 600
ENSBTAP00000001507/1-876 ERRRGDDWND ---------- ---------- --------RE WDRGRERRSR
ENSP00000314491/1-876 ERRRGDDWND ---------- ---------- --------RE WDRGRERRSR
ENSTTRP00000010529/1-875 RHRRGDDWND ---------- ---------- --------RE WDRGRERRSR
BACU012066/1-924 ERRRGDDWND RYDGKGLSKS VILGYPTVSY LLLLVRISRE WDRGRERRSR
bmy_16126T0/1-1419 ERRRGDDWND ---------- ---------- --------RE WDRGRERRSR
601 650
ENSBTAP00000001507/1-876 GEYRDYDRNR RERFSPPRHE LSPPQKRMRR DWDEHSSDPY HSGYEMPYAG
ENSP00000314491/1-876 GEYRDYDRNR RERFSPPRHE LSPPQKRMRR DWDEHSSDPY HSGYEMPYAG
ENSTTRP00000010529/1-875 GEYRDYDRNR RERFSPPRHE LSPPQKRMRR DWDEHSSDPY HSGYEMPYAG
BACU012066/1-924 GEYRDYDRNR RERFSPPRHE LSPPQKRMRR DWDEHSSDPY HSGYEMPYAG
bmy_16126T0/1-1419 GEYRDYDRNR RERFSPPRHE LSPPQKRMRR DWDEHSSDPY HSGYEMPYAG
651 700
ENSBTAP00000001507/1-876 GGGGPAYGPP QPWGHPDVHI VQHPVLPIQA ---------- ----------
ENSP00000314491/1-876 GGGGPTYGPP QPWGHPDVHI MQHHVLPIQA ---------- ----------
ENSTTRP00000010529/1-875 GGGGPAYGPP QPWVHPDVHI MQHHVLPIQA ---------- ----------
BACU012066/1-924 GGGGPAYGPP QPWGHPDVHI MQHHVLPIQA ---------- ----------
bmy_16126T0/1-1419 GGGGPAYGPP QPWGHPDVHI MQHHVLPIQA RGQLATSARH PPTLFPHNQD
701 750
ENSBTAP00000001507/1-876 -------RLG SIAEIDLGVP PPVMKTFKEF LLSLDDAVDE TEAVKRYNDY
ENSP00000314491/1-876 -------RLG SIAEIDLGVP PPVMKTFKEF LLSLDDSVDE TEAVKRYNDY
ENSTTRP00000010529/1-875 -------RLG SIAEIDLGVP PPVMKTFKEF LLSLDDSVDE TEAVKRYNDY
BACU012066/1-924 -------RLG SIAEIDLGVP PPVMKTFKEF LLSLDDSVDE TEAVKRYNDY
bmy_16126T0/1-1419 FLTGPPLRLG SIAEIDLGVP PPVMKTFKEF LLSLDDSVDE TEAVKRYNDY
751 800
ENSBTAP00000001507/1-876 KLDFRRQQMQ DFFLAHKDEE WFRSKYHPDE VGKRRQEARG ALQNRLRVFL
ENSP00000314491/1-876 KLDFRRQQMQ DFFLAHKDEE WFRSKYHPDE VGKRRQEARG ALQNRLRVFL
ENSTTRP00000010529/1-875 KLDFRRQQMQ DFFLAHKDEE WFRSKYHPDE VGKRRQEARG ALQNRLRVFL
BACU012066/1-924 KLDFRRQQMQ DFFLAHKDEE WFRSKYHPDE VGKRRQEARG ALQNRLRVFL
bmy_16126T0/1-1419 KLDFRRQQMQ DFFLAHKDEE WFRSKYHPDE VGKRRQEARG ALQNRLRVFL
801 850
ENSBTAP00000001507/1-876 SLMESGWFDN LLLDIDKADA IVKMLDAAVI KMEGGTENDL RILEQEEEEE
ENSP00000314491/1-876 SLMETGWFDN LLLDIDKADA IVKMLDAAVI KMEGGTENDL RILEQEEEEE
ENSTTRP00000010529/1-875 SLMESGWFDN LLLDIDKADA IVKMLDAAVI KMEGGTENDL RILEQEEEEE
BACU012066/1-924 SLMESGWFDN LLLDIDKADA IVKMLDAAVI KMEGGTENDL RILEQEEEEE
bmy_16126T0/1-1419 SLMESGWFDN LLLDIDKADA IVKMLDAAVI KMEGGTENDL RILEQEEEEE
851 900
ENSBTAP00000001507/1-876 QAGKPGEPNK KEESRVGPGL GDGERKANEK DDKKEDGKQA ENESSSDDKI
ENSP00000314491/1-876 QAGKPGEPSK KEEGRAGAGL GDGERKTNDK DEKKEDGKQA ENDSSNDDKT
ENSTTRP00000010529/1-875 QAGKPGEPSK KEEGRVGPGP GDGERKTNEK DDKKEDGKQA ENDSSSDDKT
BACU012066/1-924 QAGKPGEPSK KEEGRVGPGL GDGERKANEK DDKKEDGKQA ENDSSSDDKA
bmy_16126T0/1-1419 QAGKPGEPSK KEEGRVGPGL GDGERKANEK DDKKEDGKQA ENDSSSDDKT
901 950
ENSBTAP00000001507/1-876 KKSEGDGDKE EKKEDSEKEA KKSSKKRNRK HSGDDSFDEG SVSESESESE
ENSP00000314491/1-876 KKSEGDGDKE EKKEDSEKEA KKSSKKRNRK HSGDDSFDEG SVSESESESE
ENSTTRP00000010529/1-875 KKSEGDGDKE EKKEDSEKEA KKSSKKRNRK HSGDDSFDEG SVSESESESE
BACU012066/1-924 KKSEGDGDKE EKKDDSEKEA KKSSKKRNRK HSGDDSFDEG SVSESESESE
bmy_16126T0/1-1419 KKSEGDGDKE EKKEDSEKEA KKSSKKRNRK HSGDDSFDEG SVSESESESE
951 1000
ENSBTAP00000001507/1-876 SGQAEEEKEE ADETLKEKEK PKEEEREKPK DAPGLECKPR PLHKTCSLFM
ENSP00000314491/1-876 SGQAEEEKEE AEEALKEKEK PKEEEWEKPK DAAGLECKPR PLHKTCSLFM
ENSTTRP00000010529/1-875 SGQAEEEKEE AEEALKEKEK PKEEEREKPK DAPGLECKPR PLHKTCSLFM
BACU012066/1-924 SGQAEEEKDE AEEALKEKEK PKEEEREKPK DAPGLECKPR PLHKTCSLFM
bmy_16126T0/1-1419 SGQAEEEKDE AEEALKEKEK PKEEEREKPK DAPGLECKPR PLHKTCSLFM
1001 1050
ENSBTAP00000001507/1-876 RNIAPNISRA EIISLCKRYP GFMRVALSEP QPERRFFRRG WVTFDRSVNI
ENSP00000314491/1-876 RNIAPNISRA EIISLCKRYP GFMRVALSEP QPERRFFRRG WVTFDRSVNI
ENSTTRP00000010529/1-875 RNIAPNISRA EIISLCKRYP GFMRVALSEP QPERRFFRRG WVTFDRSVNI
BACU012066/1-924 RNIAPNISRA EIISLCKRYP GFMRVALSEP QPERRFFRRG WVTFDRSVNI
bmy_16126T0/1-1419 RNIAPNISRA EIISLCKRYP GFMRVALSEP QPERRFFRRG WVTFDRSVNI
1051 1100
ENSBTAP00000001507/1-876 KEICWNLQNI R--------- ---LRECELS PGVNRDLTRR VRNINGITQH
ENSP00000314491/1-876 KEICWNLQNI R--------- ---LRECELS PGVNRDLTRR VRNINGITQH
ENSTTRP00000010529/1-875 KEICWNLQNI R--------- ---LRECELS PGVNRDLTRR VRNINGITQH
BACU012066/1-924 KEICWNLQNI RVSPGSGTVE EEELRECELS PGVNRDLTRR VRNINGITQH
bmy_16126T0/1-1419 KEICWNLQNI R--------- ---LRECELS PGVNRDLTRR VRNINGITQH
1101 1150
ENSBTAP00000001507/1-876 KQIVRNDIKL AAKLVHTLDD RTQLWAPEPG TRALPASLPS QNPILKNITD
ENSP00000314491/1-876 KQIVRNDIKL AAKLIHTLDD RTQLWASEPG TPPLPTSLPS QNPILKNITD
ENSTTRP00000010529/1-875 KQIVRNDIKL AAKLIHTLDD RTQLWASEPG TPPLPASLPS QNPILKNITD
BACU012066/1-924 KQIVRNDIKL AAKLIHTLDD RTQLWASEPG TPPLPTSLPS QNPILKNITD
bmy_16126T0/1-1419 KQIVRNDIKL AAKLIHTLDD RTQLWASEPG TPPLPTSLPS QNPILKNITD
1151 1200
ENSBTAP00000001507/1-876 YLIEEVSAEE EELLGSSGGA PPEEPPKEGN PAEINVERDE KLIKVLDKLL
ENSP00000314491/1-876 YLIEEVSAEE EELLGSSGGA PPEEPPKEGN PAEINVERDE KLIKVLDKLL
ENSTTRP00000010529/1-875 YLIEEVSAEE EELLGSSGGA PPEEPPKEGN PAEINVERDE KLIKVLDKLL
BACU012066/1-924 YLIEEVSAEE EELLGSSGGA PPEEPPKEGN PAEINVERDE KLIKVLDKLL
bmy_16126T0/1-1419 YLIEEVSAEE EELLGSSGGA PPEEPPKEGN PAEINVERDE KLIKVLDKLL
1201 1250
ENSBTAP00000001507/1-876 LYLRIVHSLD YYNTCEYPNE DEMPNRCGII HVRGPMPPNR ISHGEVLEWQ
ENSP00000314491/1-876 LYLRIVHSLD YYNTCEYPNE DEMPNRCGII HVRGPMPPNR ISHGEVLEWQ
ENSTTRP00000010529/1-875 LYLRIVHSLD YYNTCEYPNE DEMPNRCGII HVRGPMPPNR ISHGEVLEWQ
BACU012066/1-924 LYLRIVHSLD YYNTCEYPNE DEMPNRCGIV HVRGPMPPNR ISHGEVLEWQ
bmy_16126T0/1-1419 LYLRIVHSLD YYNTCEYPNE DEMPNRCGII HVRGPMPPNR ISHGEVLEWQ
1251 1300
ENSBTAP00000001507/1-876 KTFEEKLTPL LSVRESLSEE EAQKMGRKDP EQEVEKFVTS NTQELGKDKW
ENSP00000314491/1-876 KTFEEKLTPL LSVRESLSEE EAQKMGRKDP EQEVEKFVTS NTQELGKDKW
ENSTTRP00000010529/1-875 KTFEEKLTPL LSVRESLSEE EAQKMGRKDP EQEVEKFVTS NTQELGKDKW
BACU012066/1-924 KTFEEKLTPL LSVRESLSEE EAQKMGRKDP EQEVEKFVTS NTQELGKDKW
bmy_16126T0/1-1419 KTFEEKLTPL LSVRESLSEE EAQKMGRKDP EQEVEKFVTS NTQELGKDKW
1301 1350
ENSBTAP00000001507/1-876 LCPLSGKKFK GPEFVRKHIF NKHAEKIEEV KKEVAFFNNF LTDAKRPALP
ENSP00000314491/1-876 LCPLSGKKFK GPEFVRKHIF NKHAEKIEEV KKEVAFFNNF LTDAKRPALP
ENSTTRP00000010529/1-875 LCPLSGKKFK GPEFVRKHIF NKHAEKIEEV KKEVAFFNNF LTDAKRPALP
BACU012066/1-924 LCPLSGKKFK GPEFVRKHIF NKHAEKIEEV KKEVAFFNNF LTDAKRPALP
bmy_16126T0/1-1419 LCPLSGKKFK GPEFVRKHIF NKHAEKIEEV KKEVAFFNNF LTDAKRPALP
1351 1400
ENSBTAP00000001507/1-876 EIKPAQPPGP AQI------- -LPPGLTPGL PYPHQTPQGL MPYGQPRPPI
ENSP00000314491/1-876 EIKPAQPPGP AQI------- -LPPGLTPGL PYPHQTPQGL MPYGQPRPPI
ENSTTRP00000010529/1-875 EIKPAQPPGP AQI------- -LPPGLTPGL PYPHQTPQGL MPYGQPRPPI
BACU012066/1-924 EIKPAQPPGP AQIIHVPVRI VLPPGLTPGL PYPHQTPQGL MPYGQPRPPI
bmy_16126T0/1-1419 EIKPAQPPGP AQ-------- ----SLTPGL PYPHQTPQGL MPYGQPRPPI
1401 1450
ENSBTAP00000001507/1-876 LGYGAGAVRP AVPTGGPPYP HAPYGAGRGN YDAFRGQGGY PGKPRNRMVR
ENSP00000314491/1-876 LGYGAGAVRP AVPTGGPPYP HAPYGAGRGN YDAFRGQGGY PGKPRNRMVR
ENSTTRP00000010529/1-875 LGYGAGAVRP AVPTGGPPYP HAPYGAGRGN YDAFRGQGGY PGKPRNRMVR
BACU012066/1-924 LGYGAGAVRP AVPAGGPPYP HAPYGAGRGN YDAFRGQGGY PGKPRNRMVR
bmy_16126T0/1-1419 LGYGAGAVRP AVPTGGPPYP HAPYGAGRGN YDAFRGQGGY PGKPRNRMVR
1451 1500
ENSBTAP00000001507/1-876 GDPRAIVEYR DLDAPDDVDF F
ENSP00000314491/1-876 GDPRAIVEYR DLDAPDDVDF F
ENSTTRP00000010529/1-875 GDPRAIVEYR DLDAPDDVDF F
BACU012066/1-924 GDPRAIVEYR DLDAPDDVDF F
bmy_16126T0/1-1419 GDPRAIVEYR DLDAPDDVDF F