KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:32 2014 Check: 00 .. Name: ENSTTRP00000009043/1-1011 Len: 1041 Check: 4163 Weight: 1.00 Name: ENSP00000358955/1-1013 Len: 1041 Check: 8955 Weight: 1.00 Name: ENSBTAP00000001511/1-968 Len: 1041 Check: 4655 Weight: 1.00 Name: bmy_15552T0/1-980 Len: 1041 Check: 423 Weight: 1.00 Name: BACU002746/1-943 Len: 1041 Check: 7200 Weight: 1.00 // 1 50 ENSTTRP00000009043/1-1011 MAEPGHSLHP SARGRGRTEP RTLRLLRLLL WVGTTFQVTQ GAGPELHACK ENSP00000358955/1-1013 MAEPGHSHHL SARVRGRTER RIPRLWRLLL WAGTAFQVTQ GTGPELHACK ENSBTAP00000001511/1-968 ---------- ---------- ---------- ---------- -----PFSPL bmy_15552T0/1-980 ---------- ---------- ---------- ---------- ---------- BACU002746/1-943 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000009043/1-1011 ESEYHYEYTA CDSLGSRWRV AVP------- -HTPGLCTS- ---------- ENSP00000358955/1-1013 ESEYHYEYTA CDSTGSRWRV AVP------- -HTPGLCTS- ---------- ENSBTAP00000001511/1-968 QSEYHYEYTA CDSTGSRWRV AVP------- -HTPGLCTS- ---------- bmy_15552T0/1-980 ---------- LSTTTSTLRV TARVPGGGSP CRIPRACAPA SLTPSRAPSA BACU002746/1-943 ---------- -MATGRNIHN TV-------- -HTDT----- ---------- 101 150 ENSTTRP00000009043/1-1011 --------LP DPVKGTECSF SCKAGEFLDM KDQSCKPCAE GRYSLGTGIR ENSP00000358955/1-1013 --------LP DPIKGTECSF SCNAGEFLDM KDQSCKPCAE GRYSLGTGIR ENSBTAP00000001511/1-968 --------LP DPVKGTECSF SCKAGEFLDM KDQSCKPCAE GRYSLGTGIR bmy_15552T0/1-980 VSSPASQLWP LPQASCHPTF SCKAGEFLDM KDQACKPCAE GRYSLGTGIR BACU002746/1-943 --------WS QKAA-----F SCKAGEFLDM KDQACKPCAE GRYSLGTGIR 151 200 ENSTTRP00000009043/1-1011 FDEWDGLPHG FASLSTNIEI EDSTTDSTEN CTSXXXXXXX XXXXXXXXXX ENSP00000358955/1-1013 FDEWDELPHG FASLSANMEL DDSAAESTGN CTSSKWVPRG DYIASNTDEC ENSBTAP00000001511/1-968 FDEWDELPHG FASLSTNMEI EDSTLESTEN CTSSKWVPLG DYIASNTDEC bmy_15552T0/1-980 FDEWDELPHG FASLSTNIEI EDSTTDSTEN CTSSKWVPLG DYISSNTDEC BACU002746/1-943 FDEWDELPHG FASLSTNIEI EDSTTDSTEN CTSSKWVPLG DYISSNTDEC 201 250 ENSTTRP00000009043/1-1011 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358955/1-1013 TATLMYAVNL KQSGTVNFEY YYPDSSIIFE FFVQNDQCQP NADDSRWMKT ENSBTAP00000001511/1-968 TATLMYAVNL KQSGTVNFEY YYPDSSIIFE FFVQNDQCQP NADDSRWMKT bmy_15552T0/1-980 TATLMYAVNL KQSGTVNFEY YYPDSSIIFE FFVQNDQCQP NADDSKWMKT BACU002746/1-943 TATLMYAVNL KQSGTVNFEY YYPDSSIIFE FFVQNDQCQP NADDSRWMKT 251 300 ENSTTRP00000009043/1-1011 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000358955/1-1013 TEKGWEFHSV ELNRGNNVLY WRTTAFSVWT KVPKPVLVRN IAITGVAYTS ENSBTAP00000001511/1-968 TEKGWEFHSV ELNRGNNVLY WRTTAFSVWS KVSKPVLVRN IAITGVAYTS bmy_15552T0/1-980 TEKGWEFHSV ELNRGNNVLY WRTAAFSVWS KVSKPVLVRN IAITGVAYTS BACU002746/1-943 TEKGWEFHSV ELNRGNNVLY WRTTAFSVWS KVSKPVLVRN IAITGVAYTS 301 350 ENSTTRP00000009043/1-1011 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXKGSST ENSP00000358955/1-1013 ECFPCKPGTY ADKQGSSFCK LCPANSYSNK GETSCHQCDP DKYSEKGSSS ENSBTAP00000001511/1-968 ECFPCKPGTY ADQQGSSSCK LCPANFYSNK GETSCHQCDP DKYSEKGSST bmy_15552T0/1-980 ECFPCKPGTY ADQKGSSCCK LCPANSYSNK GETSCHQCDP DKYSEKGSST BACU002746/1-943 ECFPCKPGTY ADQKGSSCCK LCPANSYSNK GETSCHQCDP DKYSEKGSST 351 400 ENSTTRP00000009043/1-1011 CRVRPACTDK DYFYTHTACD ASGETQLMYK WAQPKICSED LEGAVKLPAS ENSP00000358955/1-1013 CNVRPACTDK DYFYTHTACD ANGETQLMYK WAKPKICSED LEGAVKLPAS ENSBTAP00000001511/1-968 CKARPACTDK DYFYTHTACD ANGETQLMYK WAQPKICSED LEGAVKLPAS bmy_15552T0/1-980 CRVRPACTDK DYFYTHTACD ASGETQLMYK WAQPKICGED LEGAVKLPAS BACU002746/1-943 CRVRPACTDK DYFYTHTACD ASGETQLMYK WAQPKICSED LEGAVKLPAS 401 450 ENSTTRP00000009043/1-1011 VVKTRCPPCN PG-FKTN-SS TCEPCPYGSY SNGSDCNHCP AGTEPAVGFE ENSP00000358955/1-1013 GVKTHCPPCN PGFFKTN-NS TCQPCPYGSY SNGSDCTRCP AGTEPAVGFE ENSBTAP00000001511/1-968 GLKTGCPPCN PGFFKTN-SS TCEPCPYGSY SNGSDCSHCP AGTEPAVGFE bmy_15552T0/1-980 GMKTRCPPCN PGFFKTN-SS TCEPCPYGSY SNGSDCSHCP AGTEPAVGFE BACU002746/1-943 GMKTRCPPCN PGFFKTNSSS TCEPCPYGSY SNGSDCSHCP AGTEPAVGFE 451 500 ENSTTRP00000009043/1-1011 YKWWNTLPTN METTVLSGIN FEYKGMTGWE VAGDHIYTAV GASDNDFMIL ENSP00000358955/1-1013 YKWWNTLPTN METTVLSGIN FEYKGMTGWE VAGDHIYTAA GASDNDFMIL ENSBTAP00000001511/1-968 YKWWNTLPTN METTVLSGIN FEYRGMTGWE VAGDHIYSAV GASDNDFMIL bmy_15552T0/1-980 YKWWNMLPTN METTVLSGIN FEYKGMTGWE VAGDHIYTAV GASDNDFMIL BACU002746/1-943 YKWWNTLPTN METTVLSGIN FEYKGMTGWE VAGDHIYTAV GASDNDFMIL 501 550 ENSTTRP00000009043/1-1011 TLVVPGFRPP QSVMADTENK EVARITFVFE TICSVNCELY FMVGMNSRTN ENSP00000358955/1-1013 TLVVPGFRPP QSVMADTENK EVARITFVFE TLCSVNCELY FMVGVNSRTN ENSBTAP00000001511/1-968 TLVVPGFRPP QSVMADTENK EVARITFVFE TICSVNCELY FMVGVNSRTN bmy_15552T0/1-980 TLVVPGFRPP QSVMADTENK EVARITFVFE TICSVNCELY FMVGMNSRTN BACU002746/1-943 TLVVPGFRPP QSVMADTENK EVARITFVFE TICSVNCELY FMVGMNSRTN 551 600 ENSTTRP00000009043/1-1011 SPVETWRGSK GKQSYTYIIE ENATMSFTWA FQRTSFHETG RKYTSDVAKI ENSP00000358955/1-1013 TPVETWKGSK GKQSYTYIIE ENTTTSFTWA FQRTTFHEAS RKYTNDVAKI ENSBTAP00000001511/1-968 SPVETWKGSK GKQSYTYIIE ENATMSFTWA FQRTTFHETG RKYTSDVAKI bmy_15552T0/1-980 SPVETWRGSK GKQSYTYIIE ENATMSFTWA FQRTTFHETG RKYTNDVAKI BACU002746/1-943 SPVETWRGSK GKQSYTYIIE ENTTMSFTWA FQRTTFHETG RKYTNDVAKI 601 650 ENSTTRP00000009043/1-1011 YSINVTNVMD GVASYCRPCA LEASDIGSSC TSCPAGYYID RDSGTCRSCP ENSP00000358955/1-1013 YSINVTNVMN GVASYCRPCA LEASDVGSSC TSCPAGYYID RDSGTCHSCP ENSBTAP00000001511/1-968 YSINVTNVMD GVASYCRPCA LEASDMGSSC TSCLAGHYID RDSGTCHSCP bmy_15552T0/1-980 YSINVTNVMD GVASYCRPCA LEASDIGSSC TSCPAGYYID RDSGTCRSCP BACU002746/1-943 YSINVTNVMD GVASYCRPCA LEASDIGSSC TSCPAGYYID RDSGTCRSCP 651 700 ENSTTRP00000009043/1-1011 PNTILKAHQP YGAQACVTCG PGTKSNKIHS LCYNDCTFSV STPTRTFDYN ENSP00000358955/1-1013 TNTILKAHQP YGVQACVPCG PGTKNNKIHS LCYNDCTFSR NTPTRTFNYN ENSBTAP00000001511/1-968 PNTILKAHQP YGAQACMPCG PGTKSNKIHS LCYNDCTFSV STSTRTFEYN bmy_15552T0/1-980 PNTILKAHQP YGAQACMTCG PGTKSNKIHS LCYNDCTFSV STPTRTFDYN BACU002746/1-943 PNTILKAHQP YGAQACMTCG PGTKSNKIHS LCYNDCTFSV STPTRTFDYN 701 750 ENSTTRP00000009043/1-1011 FLALENTVSL AGGPSFTSKG LKYFHHFTFS LCGNQGKKMS VCTDNVTDLR ENSP00000358955/1-1013 FSALANTVTL AGGPSFTSKG LKYFHHFTLS LCGNQGRKMS VCTDNVTDLR ENSBTAP00000001511/1-968 FLALEKTVSL AGGPSFTSKG LKYFHHFTLS LCGNQGRKMS VCTDNVTDLR bmy_15552T0/1-980 FLALENTVSL AGGPSFTSKG LKYFHHFTLS LCGNQGKKMS VCTDNVTDLR BACU002746/1-943 FLALENTVSL AGGPSFTSKG LKYFHHFTLS LCGNQGKKMS VCTDNVTDLR 751 800 ENSTTRP00000009043/1-1011 IPEGESGFSK SITAYVCQAV IIPPEVTGYK AGVSSQPVSL ADRLIGVTTD ENSP00000358955/1-1013 IPEGESGFSK SITAYVCQAV IIPPEVTGYK AGVSSQPVSL ADRLIGVTTD ENSBTAP00000001511/1-968 IPEGESGFSK PITAYVCQAI IIPPEVTGYK AGVSSQPVSL ADRLIGVTTD bmy_15552T0/1-980 IPEGESGFSK SITAYVCQAV IIPPEVTGYK AGVSSQPVSL ADRLIGVTTD BACU002746/1-943 IPEGESGFSK SITAYVCQAV IIPPEVTGYK AGVSSQPVSL ADRLIGVTTD 801 850 ENSTTRP00000009043/1-1011 MTLDGITSPA ELFHPEPLGI PDVIFFYRSN DVTQSCSSGR STTIRVRCSL ENSP00000358955/1-1013 MTLDGITSPA ELFHLESLGI PDVIFFYRSN DVTQSCSSGR STTIRVRCSP ENSBTAP00000001511/1-968 MTLDGITSPA ELFHPESLGI PDVIFFYRSN DVTQSCSSGR STTIRVRCSP bmy_15552T0/1-980 MTLDGITSPA ELFHLEPLGI PDVIFFYRSN DVTQSCSSGR STTIRVRCSL BACU002746/1-943 MTLDGITSPA ELFHPEPLGI PDVIFFYRSN DVTQSCSSGR STTIRVRCSL 851 900 ENSTTRP00000009043/1-1011 LKPAPGSLSL PSTCSDGTCD GCNFHFLWES VAACPLCSAA DYHAIVSSCV ENSP00000358955/1-1013 QKTVPGSLLL PGTCSDGTCD GCNFHFLWES AAACPLCSVA DYHAIVSSCV ENSBTAP00000001511/1-968 LKPAPGSLSL PSKCSDGTCD GCNFHFLWES VAACPLCSTA DYHAIVSSCV bmy_15552T0/1-980 LKPAPGSLSL PSTCSDGTCD GCNFHFLWES VAACPLCSAA DYHAIVSSCV BACU002746/1-943 LKPAPGSLSL PSTCSDGTCD GCNFHFLWES AAACPLCSAA DYHAIVSSCV 901 950 ENSTTRP00000009043/1-1011 AGIQKTTYVW REPKLCSRGI SLPEQKVTIC KTIDFWLKVG ISAGTCTAIL ENSP00000358955/1-1013 AGIQKTTYVW REPKLCSGGI SLPEQRVTIC KTIDFWLKVG ISAGTCTAIL ENSBTAP00000001511/1-968 AGIQKTTYVW REPKLCSGGI SLPEQRVTIC KTIDFWLKVG ISAGTCTAIL bmy_15552T0/1-980 AGIQKTTYVW REPKLCSGGI SLPEQRVTIC KTIDFWLKVG ISAGTCTAIL BACU002746/1-943 AGIQKTTYVW REPKLCSGGI SLPEQRVTIC KTIDFWLKVG ISAGTCTAIL 951 1000 ENSTTRP00000009043/1-1011 LTVLTCYFWK KNQKLEYKY- KLVMNATLKD CDLPAADSCA IMEGEDVEDD ENSP00000358955/1-1013 LTVLTCYFWK KNQKLEYKYS KLVMNATLKD CDLPAADSCA IMEGEDVEDD ENSBTAP00000001511/1-968 LTVLTCYFWK KNQKLEYKYS KLVMNATLKD CDLPAADSCA IMEGEDVEDD bmy_15552T0/1-980 LTVLTCYFWK KNQKLEYKYS KLVMNATLKD CDLPAADSCA IMEGEDVEDD BACU002746/1-943 LTVLTCYFWK KNQKLEYKYS KLVMNATLKD CDLPAADSCA IMEGEDVEDD 1001 1050 ENSTTRP00000009043/1-1011 LIFTSKKSLF GKIRSFTSKR TPDGFDSVPL KTSSGSPDMD L ENSP00000358955/1-1013 LIFTSKKSLF GKIKSFTSKR TPDGFDSVPL KTSSGGLDMD L ENSBTAP00000001511/1-968 LIFTSKKSLF GKIKSFTSKR TPDGFDSVPL KTSSGGPDMD L bmy_15552T0/1-980 LIFTSKKSLF GKIRSFTSKR TPDGFDSVPL KTSSGGPDMD L BACU002746/1-943 LIFTSKKSLF GKIRSFTSKR TPDGFDSVPL KTSSGGPDMD L