KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:39 2014 Check: 00 .. Name: ENSP00000246112/1-572 Len: 594 Check: 3842 Weight: 1.00 Name: ENSBTAP00000001533/1-455 Len: 594 Check: 2742 Weight: 1.00 Name: bmy_20997T0/1-408 Len: 594 Check: 5968 Weight: 1.00 Name: ENSTTRP00000006940/1-448 Len: 594 Check: 1849 Weight: 1.00 Name: BACU006458/1-494 Len: 594 Check: 922 Weight: 1.00 // 1 50 ENSP00000246112/1-572 MTSRDQPRPK GPPKSTSPCP GISNSESSPT LNYQGILNRL KQFPRFSPHF ENSBTAP00000001533/1-455 ---------- ---------- ---------- ---------- ---------- bmy_20997T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006940/1-448 ---------- ---------- ---------- ---------- ---------- BACU006458/1-494 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000246112/1-572 AAELESIYYS LHKIQQDVAE HHKQIGNVLQ IVESCSQLQG FQSEEVSPAE ENSBTAP00000001533/1-455 ---------- ---------- ---------- ---------- ---------- bmy_20997T0/1-408 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006940/1-448 ---------- ---------- ---------- ---------- ---------- BACU006458/1-494 ---------- ---------- --MKAENFLQ IVETCGQSLG FQLREHQGNQ 101 150 ENSP00000246112/1-572 PASPGTPQQ- --------VK DKTLQESSFE DIMATRSSDW LRRPLGEDNQ ENSBTAP00000001533/1-455 ---------- ---------- ---------- --LVMRSSDW FQRSPRVNSD bmy_20997T0/1-408 ---------- ---------- ---------- --MATRSSDW LQQTTGVDDH ENSTTRP00000006940/1-448 ---------- ---------- ---------- --MATRSSDW LQQTPGVD-- BACU006458/1-494 AFPSEQPNQD PQHPEAKTAQ PSSLQGPDFE DIMATRSSDW LQQTPGVDDN 151 200 ENSP00000246112/1-572 PETQLF---- WDKEPWFWHD TLTEQLWRIF AGVHDEKAKP RDRQQAPGLG ENSBTAP00000001533/1-455 TVRQRDTQPC WDLEPQFSQD ILTEQLWEIF AGTQDQGEHP RHRSKPPWGG bmy_20997T0/1-408 AGHQLDMRPS WDSEPRFWQD VLTEQLWQIF AGTQDQGERP RRRSALLWAE ENSTTRP00000006940/1-448 TVHQLDTWPS WDSEPRFWQD VLTEQLWQIF TGTQ---EHP RRRKQAPRQG BACU006458/1-494 AGHQLDMRPS WDSEPRFWQD VLTEQLWQIF AGTQDQGEHP RRR------- 201 250 ENSP00000246112/1-572 QESKAPGSCD PGTDPCPEDA STPRPPEASS SPPEGSQDRN TSWG------ ENSBTAP00000001533/1-455 QESQEPGPRY LGVKMLPKDT LVFLPPTPSP SSSEGSREGS PSLGAVEKLS bmy_20997T0/1-408 R--------- ---------- ---------- ---------- --------LT ENSTTRP00000006940/1-448 QESQEPAPRY LGVKLLPKDT LVLSPATPSP SSSEGSRKGS TRGG------ BACU006458/1-494 ---------- ---------- -ILSPVTPSP SSSEGSRKGS TGLGTVGEGV 251 300 ENSP00000246112/1-572 ---VVQEPPG RASRFLQSIS WDPEDFEDAW KRPDALPGQS KRLAVPCKLE ENSBTAP00000001533/1-455 GRLLILRPSL -------SRC WDLEDFENTW NRPDALPWQS RKLAVPHRVE bmy_20997T0/1-408 GRLVTLRPPL -------PRC WDPEDFENTW NRPDALPWQS KKLAVPQRVE ENSTTRP00000006940/1-448 ---VAQELPV KTYQFLKPIC WDPEDFENTW NRPDALPWQS KKLAVPHRVE BACU006458/1-494 FSRVTQELAV KSYQFLKPIC WDPEDFENTW NRPDALPWQS KKLAVPHRVE 301 350 ENSP00000246112/1-572 KMRILAHGEL VLATAISSFT RHVFTCGRRG IKVWSLTGQV AEDRFPESHL ENSBTAP00000001533/1-455 KMRRLEHGEP VLATAISSFT RHAFTCSRGG VKVWSLVGQV MKARFPESFL bmy_20997T0/1-408 KMRRLEHGEP VLATAVSSFT RHAFTCGRGG VKVWSLVGQV VEAKFPESYL ENSTTRP00000006940/1-448 KIRRLEHGEP VLATAVSSFT RHAFTCGRGG VKVWSLVGRV VEARFPESYL BACU006458/1-494 KMRRLEHGEP VLATAVSSFT RHAFTCGRGG VKVWSLVGQV VEAKFPESYL 351 400 ENSP00000246112/1-572 PIQTPGAFLR TCLLSSNSRS LLTGGYNLAS VSVWDLAAPS LHVKEQLPCA ENSBTAP00000001533/1-455 RVETPGAYLR TCLLFSNSTT LLTGGHNLAG VSLWDLTAPS LRVRAELPCA bmy_20997T0/1-408 RVQTQGAYLR TCLLFSNSTA LLTGGHNLTS VSLWDLTAPS LYVRVELPCA ENSTTRP00000006940/1-448 RVQTQGAYLR TCLLFSNSTA LLTGGHNLTS VSLWDLTAPS LYVRAELPCA BACU006458/1-494 RVQTQGAYLR TCLLFSNSTA LLTGGHNLTS VSLWDLTAPS LYVRVELPCA 401 450 ENSP00000246112/1-572 GLNCQALDAN LDANLAFASF TSGVVRIWDL RDQSVVRDLK GYPDGVKSIV ENSBTAP00000001533/1-455 GLTCQALAAS PEDSLAFAGF TNGSVRIWDL RDWSVARDLP GHPNGAKSIA bmy_20997T0/1-408 GLTCQALAAS PEDNLAFAGF TDGSXRIWDL RNQSVVRDLP GHLNGAKSIA ENSTTRP00000006940/1-448 GLTCQALAAS PEDNLAFAGF TDGSVRIWDL RNQSVVRDLP GHLNGAKSIA BACU006458/1-494 GLTCQALAAS PEDNLAFAGF TDGSVRIWDL RNQSVVRDLP GHLNGAKSIA 451 500 ENSP00000246112/1-572 VKGYNIWTGG PDACLRCWDQ RTIMKPLEYQ FKSQIMSLSH SPQEDWVLLG ENSBTAP00000001533/1-455 VKDQHVWTGG LDACLRCWDL RATGEPQEYQ FESQIMSLSP SPHEDWVLVG bmy_20997T0/1-408 VKDQHIWTGG LDACLRCWDL RTTGEPQEYQ FESQIMSLSP SPSEDWVLVG ENSTTRP00000006940/1-448 VKDQHIWTGG LDACLRCWDL RTTGEPQEYQ FESQIMSLSP SPWEDWVLVG BACU006458/1-494 VKDQHIWTGG LDACLRCWDL RTTGEPQEYQ FESQIMSLSP SPWEDWVLVG 501 550 ENSP00000246112/1-572 MANGQQWLQS TSGSQRHMVG QKDSVILSVK FSPFGQWWAS VGMDDFLGVY ENSBTAP00000001533/1-455 TANGQQWLQP SLGGQKRMVG CKDGTILELK FSPVGQWWVS VGTDNLVSIF bmy_20997T0/1-408 TANGQQWLQP SLGGQKHMVG CKDGTILGLK FSPLGQWWVS VGTDNLVSVF ENSTTRP00000006940/1-448 TANGQQWLQP SLGGQKHMVG CKDGTILGLK FSPLGQWWVS VGTDNLVSVF BACU006458/1-494 TANGQQWLQP SLGGQKHMVG CKDGTILGLK FSPLGQWWVS VGTDNLVSVF 551 600 ENSP00000246112/1-572 SMPAGTKVFE VPEMSPVTCC DVSSNNRLVV TGSGEHASVY QITY ENSBTAP00000001533/1-455 SMPAGTLALQ VPERSSVMCC DVSPSNHLIV TGCRDHASVY QLTY bmy_20997T0/1-408 SMPMGTTVVQ VPETSSIXCC DVSPSNHLIV TGSRDHASVY QITY ENSTTRP00000006940/1-448 SMPMGTTVVQ VPETSSIMCC DVSPSNHLIV TGSRDHASVY QITY BACU006458/1-494 SMPMGTTVVQ VPETSSIMCC DVSPSNHLIV TGSRDHASVY QITY