KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:40 2014 Check: 00 .. Name: ENSTTRP00000006944/1-743 Len: 818 Check: 9818 Weight: 1.00 Name: ENSP00000262953/1-743 Len: 818 Check: 177 Weight: 1.00 Name: ENSBTAP00000001534/1-703 Len: 818 Check: 760 Weight: 1.00 Name: BACU006459/1-741 Len: 818 Check: 7643 Weight: 1.00 Name: bmy_20998T0/1-745 Len: 818 Check: 6113 Weight: 1.00 // 1 50 ENSTTRP00000006944/1-743 ---------- ---------- ---------- ---------- ---MYPQGRH ENSP00000262953/1-743 ---------- ---------- ---------- ---------- ---MYPQGRH ENSBTAP00000001534/1-703 ---------- ---------- ---------- ---------- ---------- BACU006459/1-741 ---------- ---------- ---------- ---------- MPRLLP---- bmy_20998T0/1-745 LSRAAPHPSL SPIPPPPLRP LSAPVPISSS SGGVGGGASR IDRMYPQGRH 51 100 ENSTTRP00000006944/1-743 PTPLQSGQPF KFSILEICDR IKEEFQFLQA QYHSLKLECE KLASEKTEMQ ENSP00000262953/1-743 PTPLQSGQPF KFSILEICDR IKEEFQFLQA QYHSLKLECE KLASEKTEMQ ENSBTAP00000001534/1-703 ---------- ---------- ---------- ---SLKLECE KLASEKTEMQ BACU006459/1-741 ---------- ---------- ---------- ---SLKLECE KLASEKTEMQ bmy_20998T0/1-745 PTPLQSGQPF KFSILEICDR IKEEFQFLQA QYHSLKLECE KLASEKTEMQ 101 150 ENSTTRP00000006944/1-743 RHYVM----- ---------- ---------- -----YYEMS YGLNIEMHKQ ENSP00000262953/1-743 RHYVM----- ---------- ---------- -----YYEMS YGLNIEMHKQ ENSBTAP00000001534/1-703 RHYVM----- ---------- ---------- -----YYEMS YGLNIEMHKQ BACU006459/1-741 RHYVMSGGCW KTQHHPEQLD IHGYGGHCQT AFPLQYYEMS YGLNIEMHKQ bmy_20998T0/1-745 RHYVM----- ---------- ---------- -----YYEMS YGLNIEMHKQ 151 200 ENSTTRP00000006944/1-743 AEIVKRLSGI CAQIIPFLTQ EXXXXXXXXX XXXXXXXXXX XXXXXXX--X ENSP00000262953/1-743 AEIVKRLSGI CAQIIPFLTQ EHQQQVLQAV ERAKQVTVGE LNSLIGQQ-L ENSBTAP00000001534/1-703 AEIVKRLSGI CAQIIPFLTQ EHQQQVLQAV ERAKQVTVGE LNSLIGQQ-L BACU006459/1-741 AEIVKRLSGI CAQIIPFLTQ EHQQQVLQAV ERAKQVTVGE LNSLIGQQQL bmy_20998T0/1-745 AEIVKRLSGI CAQIIPFLTQ E--------- ---------- ---------L 201 250 ENSTTRP00000006944/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 QPLSHHAPPV PLTPRPAGLV GGSATGLLAL SGALAAQAQL AAAVKEDRAG ENSBTAP00000001534/1-703 QPLAHHAPAV PLTPRPAGLV GGSATGLLAL SGALAAQAQL AAVTKEERAG BACU006459/1-741 QPLSHHAPPV PLTPRPAGLV GGSATGLLAL SGALAAQAQL AAVAKEDRAG bmy_20998T0/1-745 QPLSHHAPPV PLTPRPAGLV GGSATGLLAL SGALAAQAQL AAVAKEDRAG 251 300 ENSTTRP00000006944/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 VEAEGSRV-E RAPSRSASPS PPESLVEEER PSGPGGGGKQ RADEKEPSGP ENSBTAP00000001534/1-703 VEAEGSRV-E RVPSRSVSPS PPESVVEEER PSGLGGNGKQ RAEEKDLSGP BACU006459/1-741 VEAEGSRVWG PVSLQSASPS PPESVAEEER PSGPGGNGKQ RAEEKDLSGP bmy_20998T0/1-745 VEAEGSR--- ---------- --ESVAEEER PSGPGGNGKQ RAEEKDLSGP 301 350 ENSTTRP00000006944/1-743 XESDEDKSDY NLVVDEDQPS EPPSPATTPC GKAPICIPAR RDLVDSPASL ENSP00000262953/1-743 YESDEDKSDY NLVVDEDQPS EPPSPATTPC GKVPICIPAR RDLVDSPASL ENSBTAP00000001534/1-703 YESDEDKSDY NLVVDEDQPS EPPSPATTPC GKAPTCIPAR RDLVDSPASL BACU006459/1-741 YESDEDKSDY NLVVDEDQPS EPPTPATTPC GKAPICIPAR RDLVDSPASL bmy_20998T0/1-745 YESDEDKSDY NLVVDEDQPS EPPSPATTPC GKAPICIPAR RDLVDSPASL 351 400 ENSTTRP00000006944/1-743 ASSLGSPLPR TKELVLXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 ASSLGSPLPR AKELILNDLP ASTPASKSCD SSPPQDASTP GPSSASHLCQ ENSBTAP00000001534/1-703 ASSLGSPLPR AKELVLNDLP ASTPASKSCD SSPPQDASTP GPSSVSHLRQ BACU006459/1-741 ASSLGSPLPR AKELVLNDLP AGTPASKSCD SSPPQDASTP GPSSTSHLRQ bmy_20998T0/1-745 ASSLGSPLPR AKELVLNDLP AGTPASKSCD SSPPQDASTP GPSSTSHLRQ 401 450 ENSTTRP00000006944/1-743 XXXXXXXXXX XXXLRSPLTL SSPFTTSFSL GSHSALNGDL SVPSSYVSLH ENSP00000262953/1-743 LAAKPAPSTD SVALRSPLTL SSPFTTSFSL GSHSTLNGDL SVPSSYVSLH ENSBTAP00000001534/1-703 LAAKPAPSTD SIALRSPLTL SSPFSTSFSL GSHSVLNGDL SVPSSYVSLH BACU006459/1-741 LAAKPAPSTD SIALRSPLTL SSPFTTSFSL GSHSALNGDL SVPSSYVSLH bmy_20998T0/1-745 LAAKPAPSTD SIALRSPLTL SSPFTTSFSL GSHSALNGDL SVPSSYVSLH 451 500 ENSTTRP00000006944/1-743 LSPQVSGSVM YGRSPMMAFE SHPHLRGSSI SSSLPTIPGG KPANSFPVSA ENSP00000262953/1-743 LSPQVSSSVV YGRSPVMAFE SHPHLRGSSV SSSLPSIPGG KPAYSFHVSA ENSBTAP00000001534/1-703 LSPQASGSVV YGRSPMMAFE SHPHLRGSSI SSSLPTIPGG KPAYSFHVSA BACU006459/1-741 LSPQVSGSVM YGRSPMMAFE SHPHLRGSSI SSSLPTIPGG KPAYSFHVSA bmy_20998T0/1-745 LSPQVSGSVM YGRSPMMAFE SHPHLRGSSI SSSLPTIPGG KPAYSFHVSA 501 550 ENSTTRP00000006944/1-743 ERQMQTVPFP SDALGGAGIX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 DGQMQPVPFP SDALVGAGIP RHARQLHTLA HGEVVCAVTI SGSTQHVYTG ENSBTAP00000001534/1-703 DGQMQPVPFP SDALVGAGIP RHARQLHTLA HGEVVCAVTI SGSTQHVYTG BACU006459/1-741 DGQMQPVPFP SDALVGAGIP RHARQLHTLA HGEVVCAVTI SGSTQHVYTG bmy_20998T0/1-745 DGQMQPVPFP SDALVGAGIP RHARQLHTLA HGEVVCAVTI SGSTQHVYTG 551 600 ENSTTRP00000006944/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 GKGCVKVWDV GQPGAKTPVA QLDCLNRDNY IRSCKLLPDG RSLIVGGEAS ENSBTAP00000001534/1-703 GKGCVKVWDV GQPGAKMPVA QLDCLNRDNY IRSCKLLPDG RSLIVGGEAS BACU006459/1-741 GKGCVKVWDV GQPGAKTPVA QLDCLNRDNY IRSCKLLPDG RSLIVGGEAS bmy_20998T0/1-745 GKGCVKVWDV GQPGAKTPVA QLDCLNRDNY IRSCKLLPDG RSLIVGGEAS 601 650 ENSTTRP00000006944/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 TLSIWDLAAP TPRIKAELTS SAPACYALAV SPDAKVCFSC CSDGNIVVWD ENSBTAP00000001534/1-703 TLSIWDLAAP TPRIKAELTS SAPACYALAV SPDAKVCFSC CSDGNIVVWD BACU006459/1-741 TLSIWDLAAP TPRIKAELTS SAPACYALAV SPDAKVCFSC CSDGNIVVWD bmy_20998T0/1-745 TLSIWDLAAP TPRIKAELTS SAPACYALAV SPDAKVCFSC CSDGNIVVWD 651 700 ENSTTRP00000006944/1-743 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000262953/1-743 LQNQTMVRQF QGHTDGASCI DISDYGTRLW TGGLDNTVRC WDLREGRQLQ ENSBTAP00000001534/1-703 LQNQTMVRQF QGHTDGASCI DISDYGTRLW TGGLDNTVRC WDLREGRQLQ BACU006459/1-741 LQNQTMVRQF QGHTDGASCI DISDYGTRLW TGGLDNTVRC WDLREGRQLQ bmy_20998T0/1-745 LQNQTMVRQF QGHTDGASCI DISDYGTRLW TGGLDNTVRC WDLREGRQLQ 701 750 ENSTTRP00000006944/1-743 XXXXXXXIFS LGHCPNQDWL AVGMESSNVE ILHVRKPEKY QLHLHESCVL ENSP00000262953/1-743 QHDFSSQIFS LGHCPNQDWL AVGMESSNVE ILHVRKPEKY QLHLHESCVL ENSBTAP00000001534/1-703 QHDFSSQIFS LGHCPNQDWL AVGMESSSVE LLHVRKPEKY QLHLHESCVL BACU006459/1-741 QHDFSSQIFS LGHCPNQDWL AVGMESSNVE ILHVRKPEKY QLHLHESCVL bmy_20998T0/1-745 QHDFSSQIFS LGHCPNQDWL AVGMESSNVE ILHVRKPEKY QLHLHESCVL 751 800 ENSTTRP00000006944/1-743 SLKFASCGRW FVSTGKDNLL NAWRTPYGAS IFQSKESSSV LSCDISGNNK ENSP00000262953/1-743 SLKFASCGRW FVSTGKDNLL NAWRTPYGAS IFQSKESSSV LSCDISRNNK ENSBTAP00000001534/1-703 SLKFASCGRW FVSTGKDNLL NAWRTPYGAS IFQSKESSSV LSCDISGNNK BACU006459/1-741 SLKFASCGRW FVSTGKDNLL NAWRTPYGAS IFQSKESSSV LSCDISGNNK bmy_20998T0/1-745 SLKFASCGRW FVSTGKDNLL NAWRTPYGAS IFQSKESSSV LSCDISGNNK 801 850 ENSTTRP00000006944/1-743 YIVTGSGDKK ATVYEVVY ENSP00000262953/1-743 YIVTGSGDKK ATVYEVVY ENSBTAP00000001534/1-703 YIVTGSGDKK ATVYEVVY BACU006459/1-741 YIVTGSGDKK ATVYEVVY bmy_20998T0/1-745 YIVTGSGDKK ATVYEVVY