KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:40 2014 Check: 00 .. Name: bmy_01309T0/1-294 Len: 424 Check: 8301 Weight: 1.00 Name: ENSP00000228027/1-388 Len: 424 Check: 6370 Weight: 1.00 Name: ENSBTAP00000001536/1-361 Len: 424 Check: 1839 Weight: 1.00 Name: BACU015929/1-396 Len: 424 Check: 5362 Weight: 1.00 Name: ENSTTRP00000009424/1-386 Len: 424 Check: 1602 Weight: 1.00 // 1 50 bmy_01309T0/1-294 ---------- ---------- ---------- ---------- ---------- ENSP00000228027/1-388 MKTLIAAYSG VLRGERQAEA DRSQRSHGGP ALSREGSGRW GTGSSILSAL ENSBTAP00000001536/1-361 MKTLIAAYSG VLR------- ---------- ---------- GTGSSILSAL BACU015929/1-396 MKTLIAAYSG VLR------- ---------- ---------- GTGSSILSAL ENSTTRP00000009424/1-386 MKTLIAAYSG VLRGEHRAQD WRE--SFDGT VLSRESSRSW GTGSSILSAL 51 100 bmy_01309T0/1-294 ---------- ---------- ---------- ---------- -MYTFCTDCW ENSP00000228027/1-388 QDLFSVTWLN RSKVEKQLQV ISVLQWVLSF LVLGVACSAI LMYIFCTDCW ENSBTAP00000001536/1-361 QDLFSVTWLN RSKVEKQLQV ISVLQWVLSF LVLGVACSVI LMYTFCTDCW BACU015929/1-396 QDLFSITWLN RSKVEKQLQV ISVLQWVLSF LMLGVACSII LMYTFCTDCW ENSTTRP00000009424/1-386 QDLFSITCLN RSKVEKQLQV ISVLQWVLSF LMLGVTCSVI LMYTFCTDCW 101 150 bmy_01309T0/1-294 LIAVLYFTWL VFDWNTPKKG GRRSQWVRNW AVWRYFRDYF PIQLVKTHNL ENSP00000228027/1-388 LIAVLYFTWL VFDWNTPKKG GRRSQWVRNW AVWRYFRDYF PIQLVKTHNL ENSBTAP00000001536/1-361 LIAVLYFTWL VFDWNTPKKG GRRSQWVRNW AVWRYFRDYF PIQLVKTHNL BACU015929/1-396 LVAVLYFTWL VFDWNTPKKG GRRSQWVRNW AVWRYFRDYF PIQLVKTHNL ENSTTRP00000009424/1-386 LIAVLYFTWL VFDWNTPKKG GRRSQWVRNW AVWRYFRDYF PIQLVKTHNL 151 200 bmy_01309T0/1-294 LTTRNYIFGY HPHGIMGLGA FCNFSTEATE VSKKFPGIRP YLATLAGNFR ENSP00000228027/1-388 LTTRNYIFGY HPHGIMGLGA FCNFSTEATE VSKKFPGIRP YLATLAGNFR ENSBTAP00000001536/1-361 LTSRNYIFGY HPHGIMGLGA FCNFSTEATE VSKKFPGIRP YLATLAGNFR BACU015929/1-396 LTTRNYIFGY HPHGIMGLGA FCNFSTEATE VSKKFPGIRP YLATLAGNFR ENSTTRP00000009424/1-386 LTTRNYIFGY HPHGIMGLGA FCNFSTEATE VSKKFPGIRP YLATLAGNFR 201 250 bmy_01309T0/1-294 MPVLREYLMS GGICPVNQDT IDYLLSKNGS GNAIIIVVGG AAESLSSMPG ENSP00000228027/1-388 MPVLREYLMS GGICPVSRDT IDYLLSKNGS GNAIIIVVGG AAESLSSMPG ENSBTAP00000001536/1-361 MPVLREYLMS GGICPVNRDT IDYLLSKNGS GNAIIIVVGG AAESLSSMPG BACU015929/1-396 MPVLREYLMS GGICPVNQDT IDYLLSKNGS GNAIIIVVGG AAESLSSMPG ENSTTRP00000009424/1-386 MPVLREYLMS GGICPVNRDT IDYLLSKNGS GNAIIIVVGG AAESLSSMPG 251 300 bmy_01309T0/1-294 KNAVTLRNRK GFVKLALRHG ADLVPTYSFG ENEVYKQVIF EEGSWGRWVQ ENSP00000228027/1-388 KNAVTLRNRK GFVKLALRHG ADLVPIYSFG ENEVYKQVIF EEGSWGRWVQ ENSBTAP00000001536/1-361 KNAVTLRNRK GFVKLALRHG ADLVPTYSFG ENEVYKQVIF EEGSWGRWVQ BACU015929/1-396 KNAVTLRNRK GFVKLALRHG ADLVPTYSFG ENEVYKQVIF EEGSWGRWVQ ENSTTRP00000009424/1-386 KNAVTLRNRK GFVKLALHHG ADLVPTYSFG ENEVYKQVIF EEGSWGRWVQ 301 350 bmy_01309T0/1-294 KKFQKEINF- ---LHFRSHD PDSPLTLVIH KSRTRSDV-- ---------- ENSP00000228027/1-388 KKFQKYIGFA PCIFHGRGLF SSDTWGLVPY -SKPITTV-- ---------- ENSBTAP00000001536/1-361 KKFQKYIGFA PCIFHGRGLF SSDTWGLVPY -SKPITTV-- ---------- BACU015929/1-396 KKFQKYIGFA PCIFHGRGLF SSDTWGLVPY -SKPITTVEP KSIREDPLTA ENSTTRP00000009424/1-386 KKFQKYIGFA PCIFHGRGLF SSDTWGLVPY -SKPITTV-- ---------- 351 400 bmy_01309T0/1-294 ---------- ---------- ---LGEPITA PKLEHPTQQD IDLYHAMYVE ENSP00000228027/1-388 ---------- ---------- ---VGEPITI PKLEHPTQQD IDLYHTMYME ENSBTAP00000001536/1-361 ---------- ---------- ---VGEPITI PRLERPTQQD IDLYHAMYVQ BACU015929/1-396 KTNKGCEEDV QGALEGHNGP QGGVGEPITT PKLEHPTQQD IDLYHAMYVE ENSTTRP00000009424/1-386 ---------- ---------- ---VGEPITT PKLEHPTQQD IDLYHAMYVE 401 450 bmy_01309T0/1-294 ALVKLFDQHK TKFGLPETEV LEVN ENSP00000228027/1-388 ALVKLFDKHK TKFGLPETEV LEVN ENSBTAP00000001536/1-361 ALVKLFDQHK TKFGLPETEV LEVN BACU015929/1-396 ALVKLFDQHK TKFGLLETEV LEVN ENSTTRP00000009424/1-386 ALVKLFDQHK TKFGLPETEV LEVN