KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:40 2014 Check: 00 .. Name: ENSP00000318445/1-340 Len: 342 Check: 3442 Weight: 1.00 Name: ENSBTAP00000001538/1-339 Len: 342 Check: 5053 Weight: 1.00 Name: bmy_09849T0/1-253 Len: 342 Check: 431 Weight: 1.00 Name: ENSTTRP00000000110/1-342 Len: 342 Check: 5456 Weight: 1.00 Name: BACU013263/1-342 Len: 342 Check: 4634 Weight: 1.00 // 1 50 ENSP00000318445/1-340 MVTLRKRTLK VLTFLVLFIF LTSFFLNYSH TMVATTWFPK QMVLELSENL ENSBTAP00000001538/1-339 ---MRKRTLK VLTLLLLFIF LTSFFLNYSH TMLATTWFPK QMVHELSENF bmy_09849T0/1-253 MATMRKRTLK ALTFLILFIF LTSFFLNYSH TMVTTTWFPK QMVLELSENF ENSTTRP00000000110/1-342 MATARKRTLK VLTFLTLFIF LTSFFLNYSH TMVATAWFPR QMVLELSDNF BACU013263/1-342 MATMRKRTLK ALTFLILFIF LTSFFLNYSH TMVATTWFPK QMVLELSENF 51 100 ENSP00000318445/1-340 KRLIK--HRP CTCTHCIGQR KLSAWFDERF NQTMQPLLTA QNALLEDDTY ENSBTAP00000001538/1-339 KKLMKYSNRP CTCTRCIGQR RVSSWFDERF NRSMQPLLTA KNALLEEDTY bmy_09849T0/1-253 RRLVNYPHRP CTCARCIGQP KVSAWFDERF NRSLQPLLTA KNALLEEDTY ENSTTRP00000000110/1-342 RRLVNYPHRP CTCARCIGER KVSSWFDERF NRSLQPLLTA KNALLEEDTY BACU013263/1-342 RRLVNYPHRP CTCARCIGQR GVSAWFDERF NRSLQPLLTA KNALLEEDTY 101 150 ENSP00000318445/1-340 RWWLRLQREK KPNNLNDTIK ELFRVVPGNV DPMLEKRSVG CRRCAVVGNS ENSBTAP00000001538/1-339 NWWLRLQREK QPNNLNDTIK ELFQVVPGDV DPLLEKGSVG CRRCAVVGNS bmy_09849T0/1-253 NWWLRLQREK QPSNLNDTIK ELFQVVPGNV DPLLEKSLVG CRRCAVVGNS ENSTTRP00000000110/1-342 SWWLRLQREK QPSNLNDTIK ELFQVVPGNV DPLLEKSLVG CRRCAVVGNS BACU013263/1-342 NWWLRLQREK QPSNLNDTIK ELFQVVPGNV DPLLEKSLVG CRRCAVVGNS 151 200 ENSP00000318445/1-340 GNLRESSYGP EIDSHDFVLR MNKAPTAGFE ADVGTKTTHH LVYPESFREL ENSBTAP00000001538/1-339 GNLRESWYGP QIDSHDFVLR MNKAPTAGFE ADVGRKTTHH LVYPESFREL bmy_09849T0/1-253 GNLRESWYGP QIDSHDFVLR MNKAPTAGFE ADVGSKTTHH LVYPESFREL ENSTTRP00000000110/1-342 GNLRESWYGP QIDSHDFVLR MNKAPTAGFE ADVGSKTTHH LVYPESFREL BACU013263/1-342 GNLRESWYGP QIDSHDFVLR MNKAPTAGFE ADVGSKTTHH LVYPESFREL 201 250 ENSP00000318445/1-340 GDNVSMILVP FKTIDLEWVV SAITTGTISH TYIPVPAKIR VKQDKILIYH ENSBTAP00000001538/1-339 AENVSMVLVP FKTVDLEWVI SATTKGTISH TYVPVPAKIK VKKNKILIYH bmy_09849T0/1-253 AENVSMVLVP FKTTDLQWVV SATTTGTISH TYVPVPTKIK VKKNKV---- ENSTTRP00000000110/1-342 AENVSMVLVP FKTTDLQWVI SATTTGTISH TYVPVPTKIK VKKNKILIYH BACU013263/1-342 AENVSMVLVP FKTTDLQWVI SATTTGTISH TYVPVPMKIK VKKNKILIYH 251 300 ENSP00000318445/1-340 PAFIKYVFDN WLQGHGRYPS TGILSVIFSM HVCDEVDLYG FGADSKGNWH ENSBTAP00000001538/1-339 PAFIKYVFDS WLQGHGRYPS TGILSVIFSL HVCDEVDLYG FGADSKGNWH bmy_09849T0/1-253 ---------- ---------- ---------- ---------- ----SQGS-- ENSTTRP00000000110/1-342 PAFIKYVFDS WLQGHGRYPS TGILSVIFSL HICDEVDLYG FGADSKGNWH BACU013263/1-342 PAFIKYVFDS WLQGHGRYPS TGILSVIFSL HICDEVDLYG FGADGKGNWH 301 350 ENSP00000318445/1-340 HYWENNPSAG AFRKTGVHDA DFESNVTATL ASINKIRIFK GR ENSBTAP00000001538/1-339 HYWENNPSAG AFRKTGVHDG DFESNVTATL ASINKIRIFK GR bmy_09849T0/1-253 ---------G AL-------- ---------- ---------- -- ENSTTRP00000000110/1-342 HYWENNPSAG AFRKTGVHDG DFESNVTATL ASINKIRIFK GR BACU013263/1-342 HYWENNPSAG AFRKTGVHDG DFESNVTATL ASIHKIRIFK GR