KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:41 2014 Check: 00 .. Name: ENSTTRP00000012906/1-571 Len: 608 Check: 3329 Weight: 1.00 Name: bmy_08017T0/1-343 Len: 608 Check: 2142 Weight: 1.00 Name: BACU003269/1-608 Len: 608 Check: 9572 Weight: 1.00 Name: ENSP00000294409/1-573 Len: 608 Check: 7902 Weight: 1.00 Name: ENSBTAP00000001544/1-563 Len: 608 Check: 1270 Weight: 1.00 // 1 50 ENSTTRP00000012906/1-571 MANAEVSVPV GDVVVVPTEG NEGENAEDTK TQVILQLQPV QQGLFIDGHF bmy_08017T0/1-343 MANAEVSVPV GDVVVVPTEG NEGENAEDTK TQVILQLQPV QQG------- BACU003269/1-608 MANAEVSVPV GDVVVVPTEG NEGENAEDTK TQVILQLQPV QQGLFIDGHF ENSP00000294409/1-573 MANAEVSVPV GDVVVVPTEG NEGENPEDTK TQVILQLQPV QQGLFIDGHF ENSBTAP00000001544/1-563 MANAEVSVPV GDVVVVPTEG NEGENPEDTK TQVILQLQPV QQG------- 51 100 ENSTTRP00000012906/1-571 YNRIYEAGSE NNTAVVAVET HTIHKIEEGI DASTIEANED MEIAYPITCG bmy_08017T0/1-343 ---IYEAGSE NNRAVVAVET HTIHKIEEGI DASTIEANED MEIAYPITCG BACU003269/1-608 YNRIYEAGSE NNRAVVAVET HTIHKIEEGI DASTIEANED MEIAYPITCG ENSP00000294409/1-573 YNRIYEAGSE NNTAVVAVET HTIHKIEEGI DTGTIEANED MEIAYPITCG ENSBTAP00000001544/1-563 ---IYEAGSE NNTAVVAVET HTIHKIEEGI DASTIEANED MEIAYPITCG 101 150 ENSTTRP00000012906/1-571 ESKAILLWKK FVCPGINVKC VK-------- ---------- ---------- bmy_08017T0/1-343 ESKAILLWKK FVCPGINVKC VK-------- ---------- ---------- BACU003269/1-608 ESKAILLWKK FVCPGINVKC VKLRTRTGHC VQRRIIFSST IGREDGEYKA ENSP00000294409/1-573 ESKAILLWKK FVCPGINVKC VK-------- ---------- ---------- ENSBTAP00000001544/1-563 ESKAILLWKK FVCPGINVKC VK-------- ---------- ---------- 151 200 ENSTTRP00000012906/1-571 -------FND QLISPKHFVH LAGKSTLKDW KRAIRLGGIM LRKMMDSGQI bmy_08017T0/1-343 -------FND QLISPKHFVH LAGKSTLKDW KRAIRLGGIM LRKMMDSGQI BACU003269/1-608 MTKDVIWFND QLISPKHFVH LAGKSTLKDW KRAIRLGGIM LRKMMDSGQI ENSP00000294409/1-573 -------FND QLISPKHFVH LAGKSTLKDW KRAIRLGGIM LRKMMDSGQI ENSBTAP00000001544/1-563 -------FND QLISPKHFVH LAGKSTLKDW KRAIRLGGIM LRKMMDSGQI 201 250 ENSTTRP00000012906/1-571 DFYQHDKVCS NTCRSTKFDL LISSARAPVP GQQTSVVQTP TSADGSITQI bmy_08017T0/1-343 DFYQHDKVCS NTCRSTKFDL LISSARAPVP GQQTSVVQTP TSADGSITQI BACU003269/1-608 DFYQHDKVCS NTCRSTKFDL LISSARAPVP GQQTSVVQTP TSADGSITQI ENSP00000294409/1-573 DFYQHDKVCS NTCRSTKFDL LISSARAPVP GQQTSVVQTP TSADGSITQI ENSBTAP00000001544/1-563 DFYQHDKVCS NTCRSTKFDL LISSARAPVP GQQTSVVQTP TSADGSITQI 251 300 ENSTTRP00000012906/1-571 AISEESMEEA GLEWNSALTA AVSMATEEGM KKDSEEISXX XXXXXXXXXX bmy_08017T0/1-343 AISEESMEEA GLEWNSALTA AVTMATEEGV KKDSEEISED TLMFWKGIAD BACU003269/1-608 AISEESMEEA GLEWNSALTA AVTMATEEGM KKDSEEISED TLMFWKGIAD ENSP00000294409/1-573 AISEESMEEA GLEWNSALTA AVTMATEEGV KKDSEEISED TLMFWKGIAD ENSBTAP00000001544/1-563 AISEESMEEA GLEWNSALTA AVTMATEEGV KKDSEEISED TLMFWKGIAD 301 350 ENSTTRP00000012906/1-571 XXXXEEDVCN IQKEIEELLR GVQQRLMQA- -QVTDAAVLN NVAHTFGLMD bmy_08017T0/1-343 VGLMEEVVCN IQKEIEELLR GVQQRLIQAP FQVTDAAVLN NVAHTFGLMD BACU003269/1-608 VGLMEEVVCN IQKEIEELLR GVQQRLIQAP FQVTDAAVLN NVAHTFGLMD ENSP00000294409/1-573 VGLMEEVVCN IQKEIEELLR GVQQRLIQAP FQVTDAAVLN NVAHTFGLMD ENSBTAP00000001544/1-563 VGLMEEVVCN IQKEIEELLR GVQQRLIQAP FQVTDAAVLN NVAHTFGLMD 351 400 ENSTTRP00000012906/1-571 TVKKVLDNRR NQVEQGEEQF LYTLTDLERQ LEEQKKQAQD HRLKSQTVQN bmy_08017T0/1-343 TVKKVLDNRR NQVEQGEEQF LYTLTD---- ---------- ---------- BACU003269/1-608 TVKKVLDNRR NQVEQGEEQF LYTLTDLERQ LEEQKKQAQD PRLKSQTVQN ENSP00000294409/1-573 TVKKVLDNRR NQVEQGEEQF LYTLTDLERQ LEEQKKQGQD HRLKSQTVQN ENSBTAP00000001544/1-563 TVKKVLDNRK NQVEQGEEQF LYTLTDLERQ LEEQKKQAQD HRLKSQTVQN 401 450 ENSTTRP00000012906/1-571 VVLMPVSTPK PPKRPRLQRP ASTTVLSPSP PVQQPQFTVI SPITITPVGQ bmy_08017T0/1-343 ---------- ---------- ---------- ---------- ---------- BACU003269/1-608 VVLMPVSTPK PPKRPRLQRP ASTTVLSPSP PVQQPQFTVI SPITITPVGQ ENSP00000294409/1-573 VVLMPVSTPK PPKRPRLQRP ASTTVLSPSP PVQQPQFTVI SPITITPVGQ ENSBTAP00000001544/1-563 VVLMPVSTPK PPKRPRLQRP ASTTVLSPSP PVHQPQFTVI SPITITPVGQ 451 500 ENSTTRP00000012906/1-571 SFSMGNIPVA TLSQGSSPVT VHALPSGPQL FRYATVVSSA KSSSPDTVTI bmy_08017T0/1-343 ---------- ---------- ---------- ---------- ---------- BACU003269/1-608 SFSMGNIPVA TLSQGSSPVT VHTLPSGPQL FRYATVVSSA KSSSPDTVTI ENSP00000294409/1-573 SFSMGNIPVA TLSQGSSPVT VHTLPSGPQL FRYATVVSSA KSSSPDTVTI ENSBTAP00000001544/1-563 SFSMGNIPVA TLSQGSSPVT VHTLPSGPQL FRYATVVSSA KSSSPDTVTI 501 550 ENSTTRP00000012906/1-571 HPSSSLALLS STAMQDGSTL GNMTTMVSPV ELVAMESGLT SAIQAVESTS bmy_08017T0/1-343 ---------- ------GSKC G--------- ---------- ---------- BACU003269/1-608 HPSSSLALLS STAMQDGTTL GNMTTMVSPV ELVAMESGLT SAIQAVESTS ENSP00000294409/1-573 HPSSSLALLS STAMQDGSTL GNMTTMVSPV ELVAMESGLT SAIQAVESTS ENSBTAP00000001544/1-563 HPSSSLALLS STAMQDGSTL GNMTTMVSPV ELVAMESGLT SAIQAVESTS 551 600 ENSTTRP00000012906/1-571 EDGQTIIEID PAPDPEAEDT EGKAVILETE LRTEEKVVAE MEEHQHQVHN bmy_08017T0/1-343 --------ID ACEHP----- ---------- ---------- ---------- BACU003269/1-608 EDGQTIIEID PAPDPEAEDA EGKAVILETE LRTEEKVMAE MEEHQHQVHN ENSP00000294409/1-573 EDGQTIIEID PAPDPEAEDT EGKAVILETE LRTEEKVVAE MEEHQHQVHN ENSBTAP00000001544/1-563 EDGQTIIEID PAPDPEAEDT EGKAVILETE LRTEEKVVAE MEEHQHQVHN 601 650 ENSTTRP00000012906/1-571 VEIVVLED bmy_08017T0/1-343 -------- BACU003269/1-608 VEIVVLED ENSP00000294409/1-573 VEIVVLED ENSBTAP00000001544/1-563 VEIVVLED