KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:47 2014 Check: 00 .. Name: ENSP00000255304/1-1092 Len: 1108 Check: 6220 Weight: 1.00 Name: ENSBTAP00000001562/1-1095 Len: 1108 Check: 4202 Weight: 1.00 Name: ENSTTRP00000011428/1-1061 Len: 1108 Check: 5266 Weight: 1.00 Name: bmy_08463T0/1-1100 Len: 1108 Check: 931 Weight: 1.00 Name: BACU000111/1-1100 Len: 1108 Check: 2372 Weight: 1.00 // 1 50 ENSP00000255304/1-1092 MMDSPKIGNG LPVIGPGTDI GISSLHMVGY LGKNFDSAKV PSDEYCPACR ENSBTAP00000001562/1-1095 MTDSPKSGNG LPMVGPGPDI GNSSLHMVGY LGKNYDSVKV LSDGYCPACR ENSTTRP00000011428/1-1061 ---------- ---------- ---------- ---NYDSSKV PSDGYCPACR bmy_08463T0/1-1100 MMDSPKIGNG LPVIGPGTDI GISSLHMVGY LGKNYDSAKV PSDGYCPACR BACU000111/1-1100 MMDSPKIGNG LPVIGPGTDI GISSLHMVGY LGKNYDSAKV PSDGYCPACR 51 100 ENSP00000255304/1-1092 EKGKLKALKT YRISFQESIF LCEDLQCIYP LGSKSLNNLI SPDLEECHTP ENSBTAP00000001562/1-1095 AKGKLKALKT YRISFQESVS LCEDLQCIYP LGSKSLNNLF SPGLEDCHTP ENSTTRP00000011428/1-1061 TKGKLKALKT YRISFQESVF LCEDLQCIYP LGSKSLNNLI TPDLEDCHTP bmy_08463T0/1-1100 TKGKLKALKT YRISFQESVF LCEDLQCIYP LGSKSLNNLI TPDLEDRHTP BACU000111/1-1100 TKGKLKTLKT YRISFQESVF LCEDLQCIYP LGSKSLNNLI TPDLEDCHTP 101 150 ENSP00000255304/1-1092 HKPQKRKSLE SSYKDSLLLA NSKKTRNYIA IDGGKVLNSK HNGEVYDETS ENSBTAP00000001562/1-1095 NKSQKRKILE TNCEDSPLLA GSKKTKNHRG IDSEQVLNSN HNGGEYDGTS ENSTTRP00000011428/1-1061 DKPQKRKIVE TNSKESPLLA NAKKTKHHNG IDGEQVLNSK HNEEEYDETS bmy_08463T0/1-1100 NKPQKRKIVE TNYKDSPLVA NSKKTKNHSG IDGEQVLNSK HNEEEYDETS BACU000111/1-1100 NKPQKRKIVE TNYKDSPLVA NSKKTKNHSG IDGEQVLNSK HNEEEYDETS 151 200 ENSP00000255304/1-1092 SNLPDS--SG QQNPIRTADS LERNEILEAD TVDMATTKDP ATVDVSGTGR ENSBTAP00000001562/1-1095 PDLPGSLYSG QQNPVRTAGC WEQNEALEAD TVDMASEEDA PMVDVSGTEG ENSTTRP00000011428/1-1061 SDLPRLLHGG QQNPIRTTDS LEQNEILEAD IVDMAAEEDS TVVDVSRTGG bmy_08463T0/1-1100 SDLRGLLHGG QQNPIRTTDS LEQNEILEAD IVDTAAEEDS TMVDVSGTGG BACU000111/1-1100 SDLPGLLHGG QQNPIRTTDS LEQNEILEAD IVDTAAEEDS TMVDISGTGG 201 250 ENSP00000255304/1-1092 PSPQNEGCTS KLEMPLESKC TSFPQALCVQ WKNAYALCWL DCILSALVHS ENSBTAP00000001562/1-1095 TRPQNERCTS ELEKPLESKH TSLCQTSCVQ WKNAHALCWL DCILSALVHL ENSTTRP00000011428/1-1061 TAPQNEGCAS ELEVPLESKH TSFCQTSCVQ WKNAYALCWL DCILSALVHL bmy_08463T0/1-1100 TSPQNEGCTS ELEMPLESKH TSFCQISCVQ WKNAHALCWL DCILSALVHL BACU000111/1-1100 TSPQNEGCTS ELEMPLESKH TSFCQTSCVQ WKNAHALCWL DCILSALVHL 251 300 ENSP00000255304/1-1092 EELKNTVTGL CSKEESIFWR LLTKYNQANT LLYTSQLSGV KDGDCKKLTS ENSBTAP00000001562/1-1095 EGLKSTVTDL QSKEESVFGR LFTRYSEANK LLHTSQLDGV KDGDCKKLPS ENSTTRP00000011428/1-1061 EGLKNTVTDL CSKEESVFGQ LFTRYNQANE FLHTSQLDGV KDGDCKKLPS bmy_08463T0/1-1100 EGLKNTVTDL CSTEESVFGR LFTRYNQANE FLHTSQLDGV KDGDCKKLPS BACU000111/1-1100 EGLKNTVTDL RSTEESVFGR LFTRYNQANE FLHTSQLDGV KDGDCKKLPS 301 350 ENSP00000255304/1-1092 EIFAEIETCL NEVRDEIFIS LQPQLRCTLG DMESPVFAFP LLLKLETHIE ENSBTAP00000001562/1-1095 EIFAKIETCL NEVRDEIFIR LQPQLRCTLG DMESPVFAFP LLLKIEPHIE ENSTTRP00000011428/1-1061 EIFAKIETCL NEVRDDIFIR LQPQLRCTLG DMESPVFALP LLLKTEPHVE bmy_08463T0/1-1100 EIFAKIETCL NEVRDDIFIR LQPQLRCTLG DMESPVFAFP LLLKTEPHVE BACU000111/1-1100 EIFAKIETCL NEVRDDIFIR LQPQLRCTLG DMESPVFAFP LLLKTEPHVE 351 400 ENSP00000255304/1-1092 KLFLYSFSWD FECSQCGHQY QNRHMKSLVT FTNVIPEWHP LNAAHFGPCN ENSBTAP00000001562/1-1095 QLFTYSFSWN FECSHCGHKY QNRCMKNLVT FTNVIPEWHP LKAAHFGPCN ENSTTRP00000011428/1-1061 KLFTYSFSWN FECSQCGHKY QNRCMKNLVT FTNVIPEWHP VNAAHFGPCN bmy_08463T0/1-1100 NLFTYSFSWN FECSHCGHKY QNRCMKNLVT FTNVIPEWHP VNAAHFGPCN BACU000111/1-1100 NLFTYSFSWN FECSHCGHKY QNRCMKNLVT FTNVIPEWHP VNAAHFGPCN 401 450 ENSP00000255304/1-1092 NCNSKSQIRK MVLEKVSPIF MLHFVEGLPQ NDLQHYAFHF EGCLYQITSV ENSBTAP00000001562/1-1095 NCNNKSQIRK MVLEKVSLVF MLHFVEGLPH NDLQRYSFHS EGCLYQVTSV ENSTTRP00000011428/1-1061 NCNNKSQIRK MVLEKVSLIF MLHFVEGLPH NDLQHYSFHS EGCLYQITSV bmy_08463T0/1-1100 NCNNKSQIRK MVLEKVSLIF MLHFVEGLPH NDLQHYSFHS EGCLYQITSV BACU000111/1-1100 NCNNKSQIRK MVLEKVSLIF MLHFVEGLPH NDLQHYSFHS EGCLYQITSV 451 500 ENSP00000255304/1-1092 IQYRANNHFI TWILDADGSW LECDDLKGPC SERHKKFEVP ASEIHIVIWE ENSBTAP00000001562/1-1095 IQYQANNHFV TWILDADGSW LECDDLKGLC SERHETFQVP ASEIHIVIWE ENSTTRP00000011428/1-1061 IQYQANNHFI TWILDADGSW LECDDLKGPC SERHEKFQVP ASEVHIVIWE bmy_08463T0/1-1100 IQYQANNHFI TWILDADGSW LECDDLKGPC SERHEKFQVP ASEIHIVIWE BACU000111/1-1100 IQYQANNHFI TWILDADGSW LECDDLKGPC SERHEKFQVP ASEIHIVIWE 501 550 ENSP00000255304/1-1092 RKISQVTDKE AACLPLKKTN DQHALSNEKP VSLTSCSVGD AASAETASVT ENSBTAP00000001562/1-1095 RKTSQMTDKA PACHPLKKTS DQYAFGDEKQ VFPAACSAGE AASAEPSSGT ENSTTRP00000011428/1-1061 RKTSQMTDKA PACCPLKKTY DQHAFGDENQ VSPALCSVGD AASAEMSSGT bmy_08463T0/1-1100 RKTSQMTDKA PACCPLKKTY DQHAFGDENQ VSPALCSVGD AASAEMSSGT BACU000111/1-1100 RKTSQMTDKA PACCPLKKTY DQHAFGDENQ VSPALCSVGG AASAEMSSGT 551 600 ENSP00000255304/1-1092 HPKDISVAPR TLSQDTAVTH GDHLLSGPKG LVD-NILPLT LEETIQKTAS ENSBTAP00000001562/1-1095 HPTDVSMVPN TLSQDEAVAP GRHSLPNLKG SVDSGILPLT LEEV------ ENSTTRP00000011428/1-1061 HPTKASVAPN TLSQDEAVTF EHHLFSGLKG LVDKNISPLT CEEI------ bmy_08463T0/1-1100 HPTNVSVAPN TLSQDEAVTF EHHLFPGLKG LVDKNISPLT FEEI------ BACU000111/1-1100 HPTNVSVAPN TLSQDEAVTF EHHLFPGLKG LVDKNISPLT FEEI------ 601 650 ENSP00000255304/1-1092 VSQLNSEAFL LENKPVAENT GILKTNTLLS QESLMASSVS APCNEKLIQD ENSBTAP00000001562/1-1095 --QSNSEGFL LEHKPVAENA GVVEANTLQS EEPLIALLVA -PFEDKLTHN ENSTTRP00000011428/1-1061 --QVNSEGFL LENKPVAENA GVVKTHTLQS QASLMASLVS APGKDKLTQD bmy_08463T0/1-1100 --QVNSEGFL LENKPVAENA GVVKTHTLQS QESLMASLVS APCKDKLTQD BACU000111/1-1100 --QVNSEGFL LENKPVAENA GVVKTHTLQS QESLMASLVS APCKDKLTQD 651 700 ENSP00000255304/1-1092 QFVDISFPSQ VVNTNMQSVQ LNTEDTVNTK SVNNTDATGL IQGVKSVEI- ENSBTAP00000001562/1-1095 Q-PDLSFSSQ LL--TMPSVQ VSTEDTAVTQ PVNDTQAGGL IQQVKPVDTE ENSTTRP00000011428/1-1061 QFVDLSFSSQ LVNTNVPSVQ LNTEDAVVTQ PVNDMRATDL AQRVNSVET- bmy_08463T0/1-1100 QFVDLSFSSQ LVNTNVPSVQ LNTKDTVVTQ PVNDIRATDL TQRVKSVETE BACU000111/1-1100 QFVDLSFSSQ LVNTNVPSVQ LSTEDTVVTQ PVNDIRATDL TQRGKSVETE 701 750 ENSP00000255304/1-1092 -----EKDAQ LKQFLTPKTE QLKPER-VTS QVSNLKKKET TADSQTTTSK ENSBTAP00000001562/1-1095 GAVALERNAS LKQFLVAETE KLNPEQHVTS QVSDWKEKET TAFSQTVTAK ENSTTRP00000011428/1-1061 -----EKDAP SKQSLLPRPE KLQPEQHVTS QVSDLKEKET AASSQTVTAK bmy_08463T0/1-1100 GTVALEKDAP SKQFLLPKTE KLKPERHVTS QVSDLKEKET AASSXTITAK BACU000111/1-1100 GTVALEKDAP SKQFLLPKTE KLKPERHVTS QVSDLKEKET AASSQTVTAK 751 800 ENSP00000255304/1-1092 SLQNQSLKEN QKKPFVGSWV KGLISRGASF MPLCVSAHNR NTITDLQPSV ENSBTAP00000001562/1-1095 PLQNPPLKEN QKKPFVGSWV KGLLSKGVSF MPSCVSAHNR NTVTDLQPSV ENSTTRP00000011428/1-1061 LSQNPFLKEN QKKPFVGSWV KGLLSKGVSF MPFYVSAHSR NTVTDLQPSV bmy_08463T0/1-1100 PSQNPSLKEN QKKPFVGSWV KGLLSKGVSF MPFCVSAHNR NTMTDLQPSV BACU000111/1-1100 PSQNPSLKEN QKKPFVGSWV KGLLSKGVSF MPFGVSAHNR NTVTDLQPSV 801 850 ENSP00000255304/1-1092 KGVNNFGGFK TKGINQKASH VSKKARKSAS KPPPISKPPA GPPSSNGTAA ENSBTAP00000001562/1-1095 KGASNFGGFQ TKGSRQKASQ ASRKAHRRAA KPPLLSNSPP SHQSPTSTAS ENSTTRP00000011428/1-1061 KGASNFGGFK TKGTKQKGNW ASREAHSCAG KPPPVSNPAP SHPSPVSTAS bmy_08463T0/1-1100 KGASNFGGFK TKGTKQKGNW ASREAHRCAS KPPPVSNPAP SHPSTVSTAS BACU000111/1-1100 KGASNFGGFK TKGTKQKGNW ASREAHRCAS KPPPVSNPAP SHPSPVSTAS 851 900 ENSP00000255304/1-1092 HPHAHAA--S EVLEKSGSTS CGAQLNHSSY G--NGISSAN HEDLVEGQIH ENSBTAP00000001562/1-1095 PPRADGTGDS EVWKRCESAS CGAYLNHNSH GNENGVSSPN HGDTIEGQIH ENSTTRP00000011428/1-1061 ALPADGNGDV EVLKKCENAS CGAHLNHNSH GNENGVSSAN RGDSVEGQIH bmy_08463T0/1-1100 PLPANGNGDL EVLKKCENAS YGAHLNHSSH GNENGVSSAN HGDSVEGQIH BACU000111/1-1100 PLPANGNGDL EVLKKCENAS YGAHLNHSSH GNENGVSSAN HGDSVEGQIH 901 950 ENSP00000255304/1-1092 KLRLKLRKKL KAEKKKLAAL MSSPQSRTVR SENLEQVPQD GSPNDCESIE ENSBTAP00000001562/1-1095 KLRLKLLKKL KAKKKKLASL MSSPQNGTLP SEPSEQVSHC GSPNDSESIE ENSTTRP00000011428/1-1061 KLRLKLLKKL KAKKKKLAAL MSSPQNGTLP SENLEPMSHC GSPNDCESIE bmy_08463T0/1-1100 KLRLKLLKKL KAKKKKLAAL MSSPQNGTLP SENLEHMSHC GSPNDCESIE BACU000111/1-1100 KLRLKLLKKL KAKKKKLAAL MSSPQNGTLP SENLERMSHC GSPNDCESIE 951 1000 ENSP00000255304/1-1092 DLLNELPYPI DIA-SESACT TVPGVSLYSS QTHEEILAEL LSPTP-VSTE ENSBTAP00000001562/1-1095 GLLQELQRQI DIADNKSGCA TVPGVSPYGG QTHEEILAEL LSPATVVSTE ENSTTRP00000011428/1-1061 DLLKELQHQI DIADGKSGCP AVPGVSSYSS QTHEEILAEL LSPTTVVSTE bmy_08463T0/1-1100 DLLKELQHQI DIADSKSGCA TVPSVSSYSS QTHEEILAEL LSPTTVVSTE BACU000111/1-1100 DLLKELQHQI DIADSKSGCT TAPSVSAYSS QTHEEILAEL LSPTTVVSTE 1001 1050 ENSP00000255304/1-1092 LSENGEGDFR YLGMGDSHIP PPVPSEFNDV SQNTHLRQDH NYCSPTKKNP ENSBTAP00000001562/1-1095 LSENGEADFR YLEMGDSHIP APVPNELNSI AHNTHLRQEH NYCSP-KKNQ ENSTTRP00000011428/1-1061 LSENEEADFR YLEMGDNHIP APVPNELNSI PQNIHLRQDH NYCSPTKKNQ bmy_08463T0/1-1100 ISENEEADFR YLEMGDNHIP APVPSELNNI PQDIHLRQDH NYCSPTKKNQ BACU000111/1-1100 LSENEEADVR YLEMGDNHMP APVPSELNNI PQDIHLRQDH NYCSPTKKNQ 1051 1100 ENSP00000255304/1-1092 CEVQPDSLTN NACVRTLNLE SPMKTDIFDE FFSSSALNAL ANDTLDLPHF ENSBTAP00000001562/1-1095 SELQPDSLTN NAFIRTLNLE SPMKTDIFDE FFSASALNSL ANDTLDLPHF ENSTTRP00000011428/1-1061 CKVQPDSLTN NAYVTTLNSE NSMKTDIFDE FFSTSALNSL ASDTLDFPHF bmy_08463T0/1-1100 CKVQPNSLTN NAYVTTLNSE NPMKTDIFDE FFSTSALNSL ASDTLDFTHF BACU000111/1-1100 CKVQPDSLTN NAYVTTLNSE NPMKTDIFDE FFSTSALNSL ASDTLDFTHF 1101 1150 ENSP00000255304/1-1092 DEYLFENY ENSBTAP00000001562/1-1095 DEYLFENC ENSTTRP00000011428/1-1061 DDYLFENC bmy_08463T0/1-1100 DDYLFENC BACU000111/1-1100 DDYLFENC