KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:52 2014 Check: 00 .. Name: ENSBTAP00000001565/1-1061 Len: 1086 Check: 5006 Weight: 1.00 Name: ENSP00000355927/1-1066 Len: 1086 Check: 5714 Weight: 1.00 Name: bmy_17655T0/1-1051 Len: 1086 Check: 7730 Weight: 1.00 Name: BACU006057/1-1074 Len: 1086 Check: 7920 Weight: 1.00 Name: ENSTTRP00000013174/1-1064 Len: 1086 Check: 8256 Weight: 1.00 // 1 50 ENSBTAP00000001565/1-1061 MTSPRERGAD LARFYTVTEP QRHPRGYTVY KVTARVVSRR NPEDVQEIIV ENSP00000355927/1-1066 MTSYRERSAD LARFYTVTEP QRHPRGYTVY KVTARVVSRR NPEDVQEIIV bmy_17655T0/1-1051 MTSPRERGAD LARFYTVTEP QRHPRGYTVY KVTAR----- -------IIV BACU006057/1-1074 MTSPRERGAD LARFYTVTDP QRHPRGYTVY KVTARVVSRR NPEDVQEIIV ENSTTRP00000013174/1-1064 MTSPRERGAD LARFYTVTEP QRHPRGYTVY KVTARVVSRR NPEDVQEIIV 51 100 ENSBTAP00000001565/1-1061 WKRYSDFKKL HKELWQIHKN LFRHSELFPP FAKGIVFGRF DETVIEERRQ ENSP00000355927/1-1066 WKRYSDFKKL HKELWQIHKN LFRHSELFPP FAKGIVFGRF DETVIEERRQ bmy_17655T0/1-1051 WKRYSDFKKL HKELWQIHKN LFRRSELFPP FAKGIVFGRF DETVIEERRQ BACU006057/1-1074 WKRYSDFKKL HKELWQIHKN LFRRSELFPP FAKGIVFGRF DETVIEERRQ ENSTTRP00000013174/1-1064 WKRYSDFKKL HKELWQIHKN LFRRSELFPP FAKGIVFGRF DETVIEERRQ 101 150 ENSBTAP00000001565/1-1061 CAEDLLQFSA NIPALYNSKQ LEDFFKGGII NDGSELIGPV EAYPDSLTDS ENSP00000355927/1-1066 CAEDLLQFSA NIPALYNSKQ LEDFFKGGII NDSSELIGPA EAHSDSLIDT bmy_17655T0/1-1051 CAEDLLQFSA NIPALYNSKQ LEDFFKGGII NDGSELIGPV EAYSDSLIDS BACU006057/1-1074 CAEDLLQFSA NIPALYNSKQ LEDFFKGGII NDGSELIGPV EAYSDSLIDS ENSTTRP00000013174/1-1064 CAEDLLQFSA NIPALYNSKQ LEDFFKGGII NDGSELIGPV EAYSDSLIDS 151 200 ENSBTAP00000001565/1-1061 FPECSTEGFS SDSDLVSLTV DVDSLAELDD GMASNQNSPI RTFGPNLSSD ENSP00000355927/1-1066 FPECSTEGFS SDSDLVSLTV DVDSLAELDD GMASNQNSPI RTFGLNLSSD bmy_17655T0/1-1051 FPECTTEGFS SDSDLISLTV DVDSLAELDD GMASNQNSPI RTFGLSLSSD BACU006057/1-1074 FPECTTEGFS SDSDLISLTV DVDSLAELDD GMASNQNSPI RTFGLSLSSD ENSTTRP00000013174/1-1064 FPECTTEGFS SDSDLISLTV DVESLAELDD GMASNQNSPI RTFGLSLSSD 201 250 ENSBTAP00000001565/1-1061 SSVLGTVFSD SEQNKTEEER ESRSLFPSSL KSKLGKRDYL EKAGELIKLA ENSP00000355927/1-1066 SSALGAVASD SEQSKTEEER ESRSLFPGSL KPKLGKRDYL EKAGELIKLA bmy_17655T0/1-1051 SSALGAVASD SEQSKTEEER ESRGLFPGSL KSKLGKRDYL EKAGELIKLA BACU006057/1-1074 SSALGAVASD SEQSKTEEER ESRGLFPGSL KSKLGKRDYL EKAGELIKLA ENSTTRP00000013174/1-1064 SSALGAVASD SEQSKTEEER ESRGLFPGSL KSKLGKRDYL EKAGELIKLA 251 300 ENSBTAP00000001565/1-1061 LKKEEEDDYE AASDFYRKGV DLLLEGVQGE SSPTRREAVK RRTAEYLMRA ENSP00000355927/1-1066 LKKEEEDDYE AASDFYRKGV DLLLEGVQGE SSPTRREAVK RRTAEYLMRA bmy_17655T0/1-1051 LKKEEEDDYE AASDFYRKGV DLLLEGVQGE SSPTRREAVK RRTAEYLMRA BACU006057/1-1074 LKKEEENDYE AASDFYRKGV DLLLEGVQGE SSPTRREAVK RRTAEYLMRA ENSTTRP00000013174/1-1064 LKKEEEDDYE AASDFYRKGV DLLLEGVQGE SSPTRREAVK RRTAEYLMRA 301 350 ENSBTAP00000001565/1-1061 ETLSSLCAKP QLDDVSQPPG SLSSRPPWNL RSPAEELKAF RVLGVIDKVL ENSP00000355927/1-1066 ESISSLYGKP QLDDVSQPPG SLSSRPLWNL RSPAEELKAF RVLGVIDKVL bmy_17655T0/1-1051 ESLSSLYVKP QLDDVSQPPG SLSSRPPWNL RSPAEELKAF RVLGVIDKIS BACU006057/1-1074 ESLSSLYVKP QLDYVSQPPG SLSSRPPWNL RSPAEELKAF RVLGVIDKVL ENSTTRP00000013174/1-1064 ESLSSLYVKP QLDDVSQPPG SLSSRPPWNL RSPAEELKAF RVLGVIDKVL 351 400 ENSBTAP00000001565/1-1061 LVMDTRTEQT ---------- FIL-KGLRKS SEYSRNRKTI VPRCVPNMVC ENSP00000355927/1-1066 LVMDTRTEQT ---------- FIL-KGLRKS SEYSRNRKTI IPRCVPNMVC bmy_17655T0/1-1051 LVDKHRAQQA PKATEGTTDL FVLCQGLRKS SEYSRNRKTI IPRCVPNMVC BACU006057/1-1074 LVMDTRTEQT ---------- FIL-KGLRKS SEYSRNRKTI IPRCVPNMVC ENSTTRP00000013174/1-1064 LVMDTRTEQT ---------- FIL--GLRKS SEYSRNRKTI IPRCVPNMVC 401 450 ENSBTAP00000001565/1-1061 LHKYIVSEES VFLVLQHAEG GKLWSYISKF LNRSPEESFD IEEVKKSSVA ENSP00000355927/1-1066 LHKYIISEES VFLVLQHAEG GKLWSYISKF LNRSPEESFD IKEVKKPTLA bmy_17655T0/1-1051 LHKYIISEES VFLVLQHAEG GKLWSYISKF LNRSPEESFD IEAVKKSSLA BACU006057/1-1074 LHKYIISEES VFLVLQHAEG GKLWSYISKF LNRSPEESFD IEAVKKSSLA ENSTTRP00000013174/1-1064 LHKYIISEES VFLVLQHVEG GKLWSYISKF LNRSPEESFD IEAVKKSSLA 451 500 ENSBTAP00000001565/1-1061 KVHLQQPACS PQDSTSFESG GSDGGATLQV LPLKTSLTPS SQDDSNQDDG ENSP00000355927/1-1066 KVHLQQPTSS PQDSSSFESR GSDGGSMLKA LPLKSSLTPS SQDDSNQEDD bmy_17655T0/1-1051 KVQLQQPTSS PQDSSSFESR ESDGGAMLKV LPLKTSLTPS SQDDSNQDDD BACU006057/1-1074 KVQLQQPTSS PQDSSSFESR ESDGGAMLKV LPLKTSLTPS SQDDSNQDDD ENSTTRP00000013174/1-1064 KVQLQQPTSS PQDSSSFESR ESDGGAMLKI LPLKTSLTPS SQDDSTQDDD 501 550 ENSBTAP00000001565/1-1061 GQDSSPQWPD SGSSSEEECT TSYLTLCNEY GQEKIEPGSL SEEPFMKAER ENSP00000355927/1-1066 GQDSSPKWPD SGSSSEEECT TSYLTLCNEY GQEKIEPGSL NEEPFMKTEG bmy_17655T0/1-1051 GQDSSPKWPD SGSSSEEECT TSYLTLCNEY GQEKIEPGSL NEEPFIKTER BACU006057/1-1074 GQDSSPKWPD SGSSSEEECT TSYLTLCNEY GQEKIEPGSL NEEPFIKTER ENSTTRP00000013174/1-1064 GQDSSPKWPD SGSSSEEECT TSYLTLCNEY GQEKIEPGSL NEELFIKTER 551 600 ENSBTAP00000001565/1-1061 NDVDTKAIEK FPGQLATDGD SPSRQ----- LKFFPGDDGL EAASSPRTSD ENSP00000355927/1-1066 NGVDTKAIKS FPAHLAADSD SPSTQLRAHE LKFFPNDDP- EAVSSPRTSD bmy_17655T0/1-1051 NDVDTKAIEN FPAHLAADSE SPSTQLTAHE LKFFAGDDGL EAVSSPRTSD BACU006057/1-1074 NDVDTKAIEN FPAHLAADSE SPSTQLTAHE LKFFPEDDGL EAVSSPRTSD ENSTTRP00000013174/1-1064 NDVDTKAIEN FPAHLAADSD SPSAQLTAHE LKFFPGDDGL EAVSSPRTSD 601 650 ENSBTAP00000001565/1-1061 SLSRSKNIPM EFFRIDSKDS TSELLGLDFG EKLYSLKSEP LKPFFTLSDG ENSP00000355927/1-1066 SLSRSKNSPM EFFRIDSKDS ASELLGLDFG EKLYSLKSEP LKPFFTLPDG bmy_17655T0/1-1051 SLSRSKNSPM EFFRIDSKDS TSELLGLDFG EKLYSLKSEP LKPFFTLSDG BACU006057/1-1074 SLSRSKNSPM EFFRIDSKDS TSELLGLDFG EKLYSLKSEP LKPFFTLSDG ENSTTRP00000013174/1-1064 SLSRSKNSPM EFFRIDSKDS TSELLGLDFG EKLYSLKSEP LKPFFTLSDG 651 700 ENSBTAP00000001565/1-1061 ESTPRSVRTS ESKVECVAQD TISRGSDDSV PVISFKDAAF DDVSGTDEGR ENSP00000355927/1-1066 DSASRSFNTS ESKVEFKAQD TISRGSDDSV PVISFKDAAF DDVSGTDEGR bmy_17655T0/1-1051 DSTSRSFSTS ESKVEFIAHD TISRGSDDSV PVISFKDAAF DDVSGTEEGR BACU006057/1-1074 DSTSRSFSTS ESKVEFIAHD TISRGSDDSV PVISFKDAAF DDVSGTDEGR ENSTTRP00000013174/1-1064 DSTSRSFSTS ESKVEFIAHD TISRGSDDSV PVISFKDAAF DDVSGTDEER 701 750 ENSBTAP00000001565/1-1061 PDLLVNLPGE LEPMKDGVAV GPTKFTQTNI GIIESKLLET PDVLCLRLST ENSP00000355927/1-1066 PDLLVNLPGE LESTREAAAM GPTKFTQTNI GIIENKLLEA PDVLCLRLST bmy_17655T0/1-1051 PDLLVNLPGE LEPMKDGAAM GPTKFTQTNI GIIESKLLET PDVLCLRLST BACU006057/1-1074 PDLLVNLPGE LEPMKDGAAM GPTKFTQTNI GIIESKLLET PDVLCLRLST ENSTTRP00000013174/1-1064 PDLL-NLPGE LEPMKDGAAM GPTKFTQTNI GIIESKLLET PDVLCLRLST 751 800 ENSBTAP00000001565/1-1061 EQCQAQEEKG TEELSDPCGP EAHSITEKHY VQGDLGMLFL PAVDHSNTGD ENSP00000355927/1-1066 EQCQAHEEKG IEELSDPSGP KSYSITEKHY AQEDPRMLFV AAVDHSSSGD bmy_17655T0/1-1051 EQCQAREEKG TEELSDPCGP KSHSITEKHY AQGDLGMLFI AADDHSNAED BACU006057/1-1074 EQCQAREEKG TEELSDPCGP KSHSITEKHY AQGDLGMLFV AADDHSNAGD ENSTTRP00000013174/1-1064 EQCQAREEKG TEELSDPCGP KSRSITEKHY AQGDLGMLFV AADDHSNAGD 801 850 ENSBTAP00000001565/1-1061 MSLLDSSESQ FQGLSAVESP GTANNTEERL FHISDPLSGA NEYNVNTDTL ENSP00000355927/1-1066 MSLLPSSDPK FQGLGVVESA VTANNTEESL FRICSPLSGA NEYIASTDTL bmy_17655T0/1-1051 MSLLHSSDPK FQGLSLVASA VTANNAKESL FRISDPLSGA NEYNVNTDTL BACU006057/1-1074 MSLLHSSDPK FQGLSLVASA VTTNNAKESL FHISDPLSGA NEYNVNTDTL ENSTTRP00000013174/1-1064 MSLLHSSDPK FQGLSLVASA VTANNAKESL FHISDPLSGA NEYNVNIDTL 851 900 ENSBTAP00000001565/1-1061 KTEEVLLFTD QADDLAKEEP A-IFQRDLEP KQESGLAQEG DKEIHQIFED ENSP00000355927/1-1066 KTEEVLLFTD QTDDLAKEEP TSLFQRDSET KGESGLVLEG DKEIHQIFED bmy_17655T0/1-1051 KTEEVLLFTD QTDDLAKEEP T-VFQRDSET KAESGLALEG DKEIHQIFED BACU006057/1-1074 KTEEVLLFTD QTDDLAKEEP T-VFQRDSET KAESGLALEG DKEIHQIFED ENSTTRP00000013174/1-1064 KTEEVLLFAD QTDDLAKEEP T-VFQRDSET KAESGLALEG DKEIHQIFED 901 950 ENSBTAP00000001565/1-1061 LDKKLALNSR FYIPEGCIQR WAAEMVVALD ALHREGIVCR DLNPNNILLN ENSP00000355927/1-1066 LDKKLALASR FYIPEGCIQR WAAEMVVALD ALHREGIVCR DLNPNNILLN bmy_17655T0/1-1051 LDKKLALNSR FYIPEGCIQR WAAEMVVALD ALHREGIVCR DLNPNNILLN BACU006057/1-1074 LDKKLALNSR FYIPEGCIQR WAAEMVVALD ALHREGIVCR DLNPNNILLN ENSTTRP00000013174/1-1064 LDKKLALNSR FYIPEGCIQR WAAEMVVALD ALHREGIVCR DLNPNNILLN 951 1000 ENSBTAP00000001565/1-1061 DRGHIQLTYF SRWSEVEDSC DSDAIERMYC APEVGAITEE TEACDWWSLG ENSP00000355927/1-1066 DRGHIQLTYF SRWSEVEDSC DSDAIERMYC APEVGAITEE TEACDWWSLG bmy_17655T0/1-1051 DRGHIQLTYF SRWSEVEDSC DSDAIERMYC APEVGAITEE TEACDWWSLG BACU006057/1-1074 DRGHIQLTYF SRWSEVEDSC DSDAIERMYC APEVGAITEE TEACDWWSLG ENSTTRP00000013174/1-1064 DRGHIQLTYF SRWSEVEDSC DSDAVERMYC APEVGAITEE TEACDWWSLG 1001 1050 ENSBTAP00000001565/1-1061 AVLFELLTGK TLVECHPAG- -------INT HTTLNMPECV SEEARSLIQQ ENSP00000355927/1-1066 AVLFELLTGK TLVECHPAG- -------INT HTTLNMPECV SEEARSLIQQ bmy_17655T0/1-1051 AVLFELLTGK -LDFC---GL IALVLNCLEG TVVITAPPV- -----KVVVE BACU006057/1-1074 AVLFELLTGK TLVECHPAGX XXXXXXXINT HTTLNMPECV SEEACSLIQQ ENSTTRP00000013174/1-1064 AVLFELLTGK TLVECHPAG- -------INT HTTLNMPECV SEEARSLIQQ 1051 1100 ENSBTAP00000001565/1-1061 LLQFNPVERL GAGVAGVEDI KSHPFFTPVD WAELMR ENSP00000355927/1-1066 LLQFNPLERL GAGVAGVEDI KSHPFFTPVD WAELMR bmy_17655T0/1-1051 LSVF-AVHKP CDG-TEYDDV ---------- WDKKYT BACU006057/1-1074 LLQFNPVERL GAGVAGVEDI KSHPFFTPVD WAELMR ENSTTRP00000013174/1-1064 LLQFNPVERL GAGVAGVEDI KSHPFFTPVD WAELMR