KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:14:53 2014 Check: 00 .. Name: ENSP00000341549/1-533 Len: 800 Check: 5896 Weight: 1.00 Name: ENSBTAP00000001567/1-800 Len: 800 Check: 643 Weight: 1.00 Name: bmy_13717T0/1-800 Len: 800 Check: 6718 Weight: 1.00 Name: ENSTTRP00000007405/1-548 Len: 800 Check: 14 Weight: 1.00 // 1 50 ENSP00000341549/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001567/1-800 MSLSDSTRRP SGAEEVSLLV QKDDLDLPLP TQRTPSWPPS PDEDPGLPPF bmy_13717T0/1-800 MSVLDSARRP SDPEQVSLPV QKDGLGLPLP TRRTPSWPPS PDEDPGLPPF ENSTTRP00000007405/1-548 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000341549/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001567/1-800 PLEEPGPRPM TPASLPSPAL SLEEEEEEED EEDGEDSAEP EGLCSEEHPS bmy_13717T0/1-800 PLEEPGPRPM APGSLPSPAL SLEKEEEEEE DEDGEDAEEP EELRSEEHPS ENSTTRP00000007405/1-548 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000341549/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001567/1-800 QFFAEAQRLR EQRLLLDEEV SVGGRAYGVH RVILASVSSL FRGRLLGSRG bmy_13717T0/1-800 QFFAEAQRLR EQRLLLDEDV SVGGRVYGVH RVILAAVSSL FRGRLLGSRG ENSTTRP00000007405/1-548 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000341549/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001567/1-800 PQPPLSLDVT PAAWEAVLTF AYEGVLGPAS REDVLVAAEA LGAPRIKAAA bmy_13717T0/1-800 LQRPLSLDVT PGAWEAMLTF AYEGVLGPAP RGDVLVAAEA LGAPRVKAAA ENSTTRP00000007405/1-548 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000341549/1-533 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001567/1-800 QWGRQGTGSG REDEKQPSQA EELRENLRSI ELLYQEGIGC DLELEAGGCR bmy_13717T0/1-800 QWGREGAGST REDEKQPNQA EELRENLRTV ELLYQEGIGC DLELEAGGCR ENSTTRP00000007405/1-548 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000341549/1-533 ---------- -------MLL SGMRESQGTE VSLRTISTQD LRLLVSFAYS ENSBTAP00000001567/1-800 LRVHRAALAC GSEFFGAMLL SGMRESQGTE VSLHTISAQD LRLLVSFAYS bmy_13717T0/1-800 LRVHRAALAC GSEFFGAMLL SGMRESQGTE VSLHTISAQD LRLLVSFAYS ENSTTRP00000007405/1-548 --VHRAALAC GSEFFGAMLL SGMRESQGTE VSLHTISAQD LRLLVSFAYS 301 350 ENSP00000341549/1-533 GVVRARWPGL LRAAQAALQY QSSSCLDLCQ KGLARGLSPA RCLALFPMAE ENSBTAP00000001567/1-800 GVVRAKWPGL LRAAQAALQY QSSSCLALCQ KALARGLSPA RCLALIPMAE bmy_13717T0/1-800 GVVRARWPGL LRAAQAALLY QSSSCLALCQ RALAQGLNPA RCLALIPMAE ENSTTRP00000007405/1-548 GVVRARWPGL LRATQAALRY QSSSCLALCQ RALAQGLNPA RCLALIPMAE 351 400 ENSP00000341549/1-533 APGLERLWSK ARHYLLTHLP AVALCPAFPS LPAACLAELL DSDELHVQEE ENSBTAP00000001567/1-800 APGLERLWSK ARHYLLTHLP AVALCSTFPT LPAACLAELL DSDELHLQEE bmy_13717T0/1-800 APGLEGLWSK ARHYLLTHLP AVALCSTFPS LPIACLAELL DSDELHLLEE ENSTTRP00000007405/1-548 APGLERLWSK ARHYLLTHLP AVALCSTFPS LPVACLAELL DSDELHLQEE 401 450 ENSP00000341549/1-533 FEAFVAARCW LAANPETQES EAKALLRCVR FGRMSTRELR RVRAAGLLPP ENSBTAP00000001567/1-800 FEAFVAARRW LAANPDTQES EAKALLRCVR FGRMSTRELR RVRAAGLPPP bmy_13717T0/1-800 FEAFAAARRW LAANPDTQES EAKALLRCVR FGRMSTRELR RVRAAGLPPP ENSTTRP00000007405/1-548 FEAFVAALRW LAANPDTQES EAKALLRCVR FGRMSTRELR RVRAARLPPP 451 500 ENSP00000341549/1-533 LTPDLLHQLM VEADVPGQER RREPDRALVV IGGDGLRPDM ALRQPSRAVW ENSBTAP00000001567/1-800 LSPDLLHQLM VEAEVPGQER RREPDQALVV IGGDGLRSDM ATRQPSRGVW bmy_13717T0/1-800 LSPDLLRQLM VEAEVPGQER RREPDQALVV IGGDGLRSDM AMRQPSQGVW ENSTTRP00000007405/1-548 LSPDLLRQLM VEAEVPGQER RREPDQALVV IGGDGLRSDM ATRQPSRGVW 501 550 ENSP00000341549/1-533 WARAFRCGVG LVRTVEWGQL PALPAPGRFR HGAASLAGSE LYVCGGQDFY ENSBTAP00000001567/1-800 WARAFRCGIG LVRTVEWGRL PALPAPGRFR HGAASLAGSV LYVCGGQDFY bmy_13717T0/1-800 WARAFRCGVG LVRTVEWGQL PALPAPGRFR HGAASLAGSE LYVCGGQDFY ENSTTRP00000007405/1-548 WARAFRCGVG LVRTVEWGRL PALPAPGRFR HGAASLAGSE LYVCGGQDFY 551 600 ENSP00000341549/1-533 SHSNTLASTL RWEPSQEDWE EMAPLSQARS LFSLVALDGK LYALGGRHND ENSBTAP00000001567/1-800 SHSNTLASTL RWDPSQEDWE EMAPLCQPRS LFPLVALDGL LYALGGRDSG bmy_13717T0/1-800 GHSNTLASTL RWDPSQGDWE EMAPLCQARS FFPLVALDGL LYALGGRGSG ENSTTRP00000007405/1-548 GHSNTLASTL RWDPRQEDWE EMAPLCQARS FFPLVVLDGL LYALGGRDSG 601 650 ENSP00000341549/1-533 VALDSVETYN PELNVWRPAP ALPAPCFAHA AAILEGQLYV SGGCGGTGQY ENSBTAP00000001567/1-800 IALRSVETYN PELNVWRPAP PLPAPRFAHA AAVLEGQLYV SGGCSETGQY bmy_13717T0/1-800 VALSSVETYS PKLNIWRPAP ALPAPRFAHA AAVLEGQLYV SGGCGGTGRY ENSTTRP00000007405/1-548 VALSSVETYS PKLNIWRPAP ALPAPRFAHA AAVLEGQLYV SGGCSGTGQY 651 700 ENSP00000341549/1-533 LASLMHYDPK LEKPGTFLSP MGVPRAGHVM AALGGRLYVA GGLGETEDLL ENSBTAP00000001567/1-800 QASLLHYDPK LEKPVTLLSP MGVPRAGHVM ASLGGRLYVA GGLGQTGDLL bmy_13717T0/1-800 LASLLHYDPK LEKPGTLLSP MGVPRAGHVM AALGGRLYVA GGLGETGDLL ENSTTRP00000007405/1-548 LASLLHYDPK LEKPGTLLSP MGVPRAGHVM AALGGRLYVA GGLGETGDLL 701 750 ENSP00000341549/1-533 SFEAYELRTD SWTHLAPLPS PHVGAASAVL QGELLVLGGY SHRTYALSHL ENSBTAP00000001567/1-800 SFEAYDPSTG SWTQLTPLPS PHVGAAGAVL QGELLVLGGY SHRTYAPSHL bmy_13717T0/1-800 SFEAYEPRTD SWXHLXPLPS PHVGAAGAVL QGELLVLGGY SHRTYAPSHL ENSTTRP00000007405/1-548 SFEAYEPRTD SWTHLTPLPS PHVGAAGAVL QGELLVLGGY SHRTYAPSHL 751 800 ENSP00000341549/1-533 IHAYCPGLGR WLCLGTLPRP RAEMPACILT LPAVQHIALV PTPHQTKPAG ENSBTAP00000001567/1-800 IHAYCPGLGR WLCLGTLPRP RAEMPACILT LPAVQHVALV PTRHQTKPAG bmy_13717T0/1-800 IHAFCPGLGR WLCLGTLPRP RAEMPACILT QPTVQQIALV PTGHKTKPGR ENSTTRP00000007405/1-548 IHAFCPGLGR WLCLGTLPRP RAEMPACILT LPTVQQIALV PTRHQTKPAG