KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:53 2014 Check: 00 .. Name: bmy_09576T0/1-378 Len: 553 Check: 3549 Weight: 1.00 Name: ENSP00000265807/1-454 Len: 553 Check: 3097 Weight: 1.00 Name: ENSBTAP00000001572/1-450 Len: 553 Check: 8507 Weight: 1.00 Name: BACU007773/1-442 Len: 553 Check: 8013 Weight: 1.00 Name: ENSTTRP00000001301/1-450 Len: 553 Check: 2807 Weight: 1.00 // 1 50 bmy_09576T0/1-378 MPSAVPWATA ILPHLA---- ---------- --------W- ---------- ENSP00000265807/1-454 MLKQILSEMY IDPDLLAELS EEQKQILFFK MREEQIRRWK EREAAMERKE ENSBTAP00000001572/1-450 MLKQILSEMY IDPDLLAELN EEQKQILFFK MREEQVRRWK EREASMEKQE BACU007773/1-442 --------MY IDPDLLAELS EEQKQILFFK MREEQVRRWK EREAAMEKQE ENSTTRP00000001301/1-450 MLKQILSEMY IDPDLLAELS EEQKQILFFK MREEQVRRWK EREAAMEKQE 51 100 bmy_09576T0/1-378 -IQLQNRPLG E--ELVHFKK LVKQKEAFII AF-------- -------ILG ENSP00000265807/1-454 SLPVKPRPKK ENGKSVHW-K LGADKEVWVW VMGEHHLDKP YDVLCNEIIA ENSBTAP00000001572/1-450 SLPVKPRPKK DNGRSVHW-K LGADNEVWVW VMGEHHLDKP YDVICDEILA BACU007773/1-442 SLPVKPRPKK DNGKSVHW-K LGADEEVWVW VMGEHHLDKP YNALCDEILA ENSTTRP00000001301/1-450 SLPVKPRPKK DNGKSVHW-K LGADEEVWVW VMGEHHLDKP YDTLCDEIRA 101 150 bmy_09576T0/1-378 IHIHLDEIQT LYVITSVPSV EVIWNLRVSL SVS------- ---------- ENSP00000265807/1-454 ERARLKAEQE AEEPRKTHSE EFTNSLKTKS QYHDLQAPDN QQTKDIWKKV ENSBTAP00000001572/1-450 ERARLKAEQE TPELRKAQPG ELSSSSKSKL PSSEGRAPGA GETGNVGDKV BACU007773/1-442 QGARLKPEQE VRELRKTQSR EFTSSLKPKS HSSDVRAPGD REPRSVCEKA ENSTTRP00000001301/1-450 QRARLKSGQE VRELRKTQSR EFTSSLKPKS HSSDVRAPGD REPRSVCEKA 151 200 bmy_09576T0/1-378 ---------R GGERNLQNEA LSSILKSVKN TP-------- -----GFRDR ENSP00000265807/1-454 AEKEELEQGS RPAPTLEEEK IRSLSSSSRN IQQMLADSIN RMKAYAFHQK ENSBTAP00000001572/1-450 AEAGTPGRGC GPAAPLAEQK APLSSSSSRN IHQMLADSVS RIKEFGFHQK BACU007773/1-442 AEEGGHGRGR GPASPLEEEK TPLPSSSSRN VHQMLADSIS RMKEYGFHQK ENSTTRP00000001301/1-450 AEEGGHGPGR GPASPLEEQK TPLPSSSSRS IHQMLADSIS RMKEYGFHQK 201 250 bmy_09576T0/1-378 ---------- ---------- PRVFKPWSP- ---------- ---------- ENSP00000265807/1-454 KESMKKKQDE EINQIEEERT KQICKSWKED SEWQASLRKS KAADEKRRSL ENSBTAP00000001572/1-450 KVSVKKTQDE EIKQIDEERT KEIYKNWKED SEWQASLRKS KAADEKRRSL BACU007773/1-442 KESVKKTQDE EVKQIDEERT KQIYKSWKED SEWQASLRKS KAADERRRSL ENSTTRP00000001301/1-450 KESVKKTQDE EVKQIDEERT KQIYKSWKED SEWQASLRKS KAADERRRSL 251 300 bmy_09576T0/1-378 ---------- ---------A GPGQAGHL-- -----RPWFS LRSPSMGPGG ENSP00000265807/1-454 AKQAREDYKR LSLGAQKGRG GERLQSPLRV PQKPERPPLP PKPQFLNSGA ENSBTAP00000001572/1-450 AKQAREDYKR LS---QRGRS GKGQQGPPGG PQKPKRPPLP PKPHFLSPAG BACU007773/1-442 AKQAREDYKR LS---QRGRG GEGPQSPPGG PQKPRRPPLP PKPQFLSPAG ENSTTRP00000001301/1-450 AKQAREDYKR LS---QRGRG GEGPQSPLGG PQKPRRPPLP PKPQFLSPLG 301 350 bmy_09576T0/1-378 FPGFPDNDTE DQHGRRQGVP SADVG----- ---------- --KGAENAAP ENSP00000265807/1-454 YPQKP---LR NQGVVRTLSS SAQEDIIRWF KEEQLPLRAG YQKTSDTIAP ENSBTAP00000001572/1-450 QPHTP---LR NQRVRRPASS PAQEDIRRWF QEEQLPLRAG YLADSDSIAP BACU007773/1-442 HPCRP---LR NQAAARPASR SAQGDIVRWF REEQLPLRAG YLGTSDSVAP ENSTTRP00000001301/1-450 HPCRP---LR NQAAARPASH SAHADIVRWF REEQLPLRAG YLGTSDSIAP 351 400 bmy_09576T0/1-378 QVRGILTLQR ANE-LLSTCV PGSFLIRVSE RIKGYVLSYL SKDGCKHFLI ENSP00000265807/1-454 WFHGILTLKK ANELLLSTGM PGSFLIRVSE RIKGYALSYL SEDGCKHFLI ENSBTAP00000001572/1-450 WFHGILTVNR ANE-LLSTCV PGSFLIRVNE KVKGYTLSYQ SEDGCKHFLI BACU007773/1-442 WFHGILTPQR ANE-LLSTCV PGSFLIRVSE RIKGYVLSYL SKDGCKHFLI ENSTTRP00000001301/1-450 WFHGILTVQR ANE-LLSTCV PGSFLIRVSE RIKGYVLSYL SKDGCKHFLI 401 450 bmy_09576T0/1-378 DASADSYSFL GADQLQHASL AELVEYHKEE PITSLGKELL LYPCGQREQP ENSP00000265807/1-454 DASADAYSFL GVDQLQHATL ADLVEYHKEE PITSLGKELL LYPCGQQDQL ENSBTAP00000001572/1-450 DASSDSYSFL GVDQLQHASL AELVEYHKEE PITSLGKELL LYPCGQQREP BACU007773/1-442 DASTDSYSFL GADQLQHASL AELVEYHKEE PITSLGKELL LYPCGQPEQP ENSTTRP00000001301/1-450 DASTDSYSFL GADQLQHASL ADLVEYHKEE PITSLGKELL LYPCGQQEQP 451 500 bmy_09576T0/1-378 PDYQELRQLG RPPDRHRGDG HLCMKPHHPA ASRSRSSERT LGDPMATSLL ENSP00000265807/1-454 PDYLELFE-- ---------- ---------- ---------- ---------- ENSBTAP00000001572/1-450 PDYLELFE-- ---------- ---------- ---------- ---------- BACU007773/1-442 PDYQELFE-- ---------- ---------- ---------- ---------- ENSTTRP00000001301/1-450 PDYQGLFE-- ---------- ---------- ---------- ---------- 501 550 bmy_09576T0/1-378 HKCWSLINAK RESPLHCTHP SSKGRRTPIS AAPNMKATTL VMYGINEEEI ENSP00000265807/1-454 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000001572/1-450 ---------- ---------- ---------- ---------- ---------- BACU007773/1-442 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001301/1-450 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_09576T0/1-378 GTF ENSP00000265807/1-454 --- ENSBTAP00000001572/1-450 --- BACU007773/1-442 --- ENSTTRP00000001301/1-450 ---