KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:14:58 2014 Check: 00 .. Name: ENSTTRP00000010577/1-666 Len: 725 Check: 6708 Weight: 1.00 Name: ENSBTAP00000001619/1-669 Len: 725 Check: 9027 Weight: 1.00 Name: ENSP00000311747/1-669 Len: 725 Check: 7969 Weight: 1.00 Name: bmy_07809T0/1-725 Len: 725 Check: 3355 Weight: 1.00 Name: BACU003520/1-669 Len: 725 Check: 7966 Weight: 1.00 // 1 50 ENSTTRP00000010577/1-666 ---------- ---------- ---------- ---------- MKIFVGNVDG ENSBTAP00000001619/1-669 ---------- ---------- ---------- ---------- MKIFVGNVDG ENSP00000311747/1-669 ---------- ---------- ---------- ---------- MKIFVGNVDG bmy_07809T0/1-725 LRGGVLGRQP FLGRTAGGSD VSPVAGGEVQ ALREGGCGGK MKIFVGNVDG BACU003520/1-669 ---------- ---------- ---------- ---------- MKIFVGNVDG 51 100 ENSTTRP00000010577/1-666 ADTTPEELAA LFAPYGTVMS CAVMKQFAFV HMRENAGALR AIEALHGHEL ENSBTAP00000001619/1-669 ADTTPEELAA LFAPYGTVMS CAVMKQFAFV HMRENAGAVR AIEALHGHEL ENSP00000311747/1-669 ADTTPEELAA LFAPYGTVMS CAVMKQFAFV HMRENAGALR AIEALHGHEL bmy_07809T0/1-725 ADTTPEELAA LFAPYGTVMS CAVMKQFAFV HMRENAGALR AIEALHGHEL BACU003520/1-669 ADTTPEELAA LFAPYGTVMS CAVMKQFAFV HMRENAGALR AIEALHGHEL 101 150 ENSTTRP00000010577/1-666 RPGRALVVEM SRPRPLNTWK IFVGNVSAAC TSQELRSLFE RRGRVIECDV ENSBTAP00000001619/1-669 RPGRALVVEM SRPRPLNTWK IFVGNVSAAC TSQELRSLFE RRGRVIECDV ENSP00000311747/1-669 RPGRALVVEM SRPRPLNTWK IFVGNVSAAC TSQELRSLFE RRGRVIECDV bmy_07809T0/1-725 RPGRALVVEM SRPRPLNTWK IFVGNVSAAC TSQELRSLFE RRGRVIECDV BACU003520/1-669 RPGRALVVEM SRPRPLNTWK IFVGNVSAAC TSQELRSLFE RRGRVIECDV 151 200 ENSTTRP00000010577/1-666 VK-------- --------DY AFVHMEKEAD AKAAIAQLNG KEVKGKRINV ENSBTAP00000001619/1-669 VK-------- --------DY AFVHMEKEAD AKAAIAQLNG KEVKGKRINV ENSP00000311747/1-669 VK-------- --------DY AFVHMEKEAD AKAAIAQLNG KEVKGKRINV bmy_07809T0/1-725 VKACPAPLIA NPLSAALSDY AFVHMEKEAD AKAAIAQLNG KEVKGKRINV BACU003520/1-669 VK-------- --------DY AFVHMEKEAD AKAAIAQLNG KEVKGKRINV 201 250 ENSTTRP00000010577/1-666 ELSTKGQKKG PGLAIQSGDK TKKPGAGDTA FPGTGGFSAT FDYQQAFGNS ENSBTAP00000001619/1-669 ELSTKGQKKG PGLAIQSGDK TKKPGAGDTA FPGTGGFSAT FDYQQAFGNS ENSP00000311747/1-669 ELSTKGQKKG PGLAVQSGDK TKKPGAGDTA FPGTGGFSAT FDYQQAFGNS bmy_07809T0/1-725 ELSTKGQKKG PGLAIQSGDK TKKPGAGDTA FPGTGGFSAT FDYQQAFGNS BACU003520/1-669 ELSTKGQKKG PGLAIQSGDK TKKPGAGDTA FPGTGGFSAT FDYQQAFGNS 251 300 ENSTTRP00000010577/1-666 TGGFDGQARQ PTPPFFGRDR SPLRRSPPRA SYVAPLTAQP ATYRAQPSAS ENSBTAP00000001619/1-669 TGGFDGQARQ PTPPFFGRDR SPLRRSPPRA SYVAPLTAQP ATYRAQPSVS ENSP00000311747/1-669 TGGFDGQARQ PTPPFFGRDR SPLRRSPPRA SYVAPLTAQP ATYRAQPSVS bmy_07809T0/1-725 TGGFDGQARQ PTPPFFGRDR SPLRRSPPRA SYVAPLTAQP ATYRAQPSVS BACU003520/1-669 TGGFDGQARQ PTPPFFGRDR SPLRRSPPRA SYVAPLTAQP ATYRAQPSVS 301 350 ENSTTRP00000010577/1-666 LGAAYRAQPS ASLGVGYRTQ PMTAQAASYR AQPSVSLGAP YRGQLASPSS ENSBTAP00000001619/1-669 LGAAYRAQPS ASLGVGYRTQ PMTAQAASYR AQPSVSLGAP YRGQLASPSS ENSP00000311747/1-669 LGAAYRAQPS ASLGVGYRTQ PMTAQAASYR AQPSVSLGAP YRGQLASPSS bmy_07809T0/1-725 LGAAYRAQPS ASLGVGYRTQ PMTAQAASYR AQPSVSLGAP YRGQLASPSS BACU003520/1-669 LGAAYRAQPS ASLGVGYRTQ PMTAQAASYR AQPSVSLGAP YRGQLASPSS 351 400 ENSTTRP00000010577/1-666 QSAAASSLGP YGGAQPSDS- LSSY-GQPAA ASSXXXXXXX XXXXXXXXXX ENSBTAP00000001619/1-669 QSAAASSLGP YGGAQPSASA LSSYGGQPAA ASSLNSYGAQ GSSLASYGNQ ENSP00000311747/1-669 QSAAASSLGP YGGAQPSASA LSSYGGQAAA ASSLNSYGAQ GSSLASYGNQ bmy_07809T0/1-725 QSAAASSLGP YGGAQPSASA LSSYGGQPAA ASSLNSYGAQ GSSLASYGNQ BACU003520/1-669 QSAAASSLGP YGGAQPSASA LSSYGGQPAA ASSLNSYGAQ GSSLASYGNQ 401 450 ENSTTRP00000010577/1-666 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000001619/1-669 PSSYGAQAAS SYGVRAAASS YNTQGAANSL GSYGAQAASY GAQSAASSLA ENSP00000311747/1-669 PSSYGAQAAS SYGVRAAASS YNTQGAASSL GSYGAQAASY GAQSAASSLA bmy_07809T0/1-725 PSSYGAQAAS SYGVRAAASS YNTQGAASSL GSYGAQAASY GAQSAASSLA BACU003520/1-669 PSSYGAQAAS SYGVRAAASS YNTQGAASSL GSYGAQAASY GAQSAASSLA 451 500 ENSTTRP00000010577/1-666 XXXXXXXYSA QPSASYNAQS APYAAQQAAS YSSQ-AAYVA QPATAAAYAS ENSBTAP00000001619/1-669 YGAQAASYNA QPSASYNAQS APYAAQQAAS YSSQPAAYVA QPATAAAYAS ENSP00000311747/1-669 YGAQAASYNA QPSASYNAQS APYAAQQAAS YSSQPAAYVA QPATAAAYAS bmy_07809T0/1-725 YGAQAASYSA QPSASYNAQS APYAAQQAAS YSSQPAAYVA QPATAAAYAS BACU003520/1-669 YGAQAASYSA QPSASYNAQS APYAAQQAAS YSSQPAAYVA QPATAAAYAS 501 550 ENSTTRP00000010577/1-666 QPAAYAAQAT TPMAGSYGAQ PVAQTQLNSY GAQASMGLSG SYGAQSAAAA ENSBTAP00000001619/1-669 QPAAYAAQAT TPMAGSYGAQ PVVQTQLNSY GAQASMGLSG SYGAQSAAAA ENSP00000311747/1-669 QPAAYAAQAT TPMAGSYGAQ PVVQTQLNSY GAQASMGLSG SYGAQSAAAA bmy_07809T0/1-725 QPAAYAAQAT TPMAGSYGAQ PVVQTQLNSY GAQASMGLSG SYGAQSAAAA BACU003520/1-669 QPAAYAAQAT TPMAGSYGAQ PVVQTQLNSY GAQASMGLSG SYGAQSAAAA 551 600 ENSTTRP00000010577/1-666 TGSYGAAAAY GAQPSATLAA PYRTQSSASL AASYAAQQHP QAAASYRGQP ENSBTAP00000001619/1-669 TGSYGAAAAY GAQPSATLAA PYRTQSSASL AASYAAQQHP QAAASYRGQP ENSP00000311747/1-669 TGSYGAAAAY GAQPSATLAA PYRTQSSASL AASYAAQQHP QAAASYRGQP bmy_07809T0/1-725 TGSYGAAAAY GAQPSATLAA PYRTQSSASL AASYAAQQHP QAAASYRGQP BACU003520/1-669 TGSYGAAAAY GAQPSATLAA PYRTQSSASL AASYAAQQHP QAAASYRGQP 601 650 ENSTTRP00000010577/1-666 GNAYDGAGQP SAAYLSMSQG AVANANSTPP PYERTRLSPP RASYDDPYKK ENSBTAP00000001619/1-669 GNAYDGTGQP SAAYLSMSQG AVANANSTPP PYERTRLSPP RASYDDPYKK ENSP00000311747/1-669 GNAYDGAGQP SAAYLSMSQG AVANANSTPP PYERTRLSPP RASYDDPYKK bmy_07809T0/1-725 GNAYDGAGQP SAAYLSMSQG AVANANSTPP PYERTRLSPP RASYDDPYKK BACU003520/1-669 GNAYDGAGQP SAAYLSMSQG AVANANSTPP PYERTRLSPP RASYDDPYKK 651 700 ENSTTRP00000010577/1-666 AVAMSKRYGS DRRLAELSDY RRLSESQLSF RRSPTKSSLD YRRLPDAHSD ENSBTAP00000001619/1-669 AVAMSKRYGS DRRLAELSDY RRLSESQLSF RRSPTKSSLD YRRLPDAHSD ENSP00000311747/1-669 AVAMSKRYGS DRRLAELSDY RRLSESQLSF RRSPTKSSLD YRRLPDAHSD bmy_07809T0/1-725 AVAMSKRYGS DRRLAELSDY RRLSESQLSF RRSPTKSSLD YRRLPDAHSD BACU003520/1-669 AVAMSKRYGS DRRLAELSDY RRLSESQLSF RRSPTKSSLD YRRLPDAHSD 701 750 ENSTTRP00000010577/1-666 YARYSGSYND YLRAAQMHSG YQRRM ENSBTAP00000001619/1-669 YARYSGSYND YLRAAQMHSG YQRRM ENSP00000311747/1-669 YARYSGSYND YLRAAQMHSG YQRRM bmy_07809T0/1-725 YARYSGSYND YLRAAQMHSG YQRRM BACU003520/1-669 YARYSGSYND YLRAAQMHSG YQRRM