KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:15:00 2014  Check: 00 ..

 Name: ENSTTRP00000016362/1-233  Len:    235  Check:  4721  Weight:  1.00
 Name: bmy_03278T0/1-225         Len:    235  Check:  7669  Weight:  1.00
 Name: ENSP00000278949/1-235     Len:    235  Check:  7287  Weight:  1.00
 Name: ENSBTAP00000001630/1-234  Len:    235  Check:  7782  Weight:  1.00

//


                          1                                                   50
ENSTTRP00000016362/1-233  MLQSGAAGGR GCALCPLLGV LFFQ-XXXXX XXXXXXXXXX XXXXXXXXXX 
bmy_03278T0/1-225         MLQSGAAGGR GCALCPLLGV LFFQGVYIVL SLEIKADAHV WGYVGENIRL 
ENSP00000278949/1-235     MQQRGAAGSR GCALFPLLGV LFFQGVYIVF SLEIRADAHV RGYVGEKIKL 
ENSBTAP00000001630/1-234  MQQSGVPGSR GCALCPLLGV LFFQGVYVIF SLEIKADAHV RGYVGENIKL 


                          51                                                 100
ENSTTRP00000016362/1-233  XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XFHYQSFQYP TTVGTFRNRI 
bmy_03278T0/1-225         KCTFKSTSSI TDKLTIDWTY RPPSSSRTES IFHYQSFQYP TTVGTFRDRI 
ENSP00000278949/1-235     KCTFKSTSDV TDKLTIDWTY RPPSSSHTVS IFHYQSFQYP TTAGTFRDRI 
ENSBTAP00000001630/1-234  RCTFKSSSSI TDKLTIDWTY RPPSSSRTES IFHYQSFQYP TTAGTFRDRI 


                          101                                                150
ENSTTRP00000016362/1-233  SWVGDVYNGD ASISIINPTI KDNGTFSCAV KNPPDVYHNI PGTELTVTER 
bmy_03278T0/1-225         SWVGDVYKGD ASISIINPTI KDNGTFSCAV KNPPDVYHNI AGTELTVTER 
ENSP00000278949/1-235     SWVGNVYKGD ASISISNPTI KDNGTFSCAV KNPPDVHHNI PMTELTVTER 
ENSBTAP00000001630/1-234  SWVGDVYKGD ASISINNPTM KDNGTFSCAV KNPPDVHHNI PATELTVTER 


                          151                                                200
ENSTTRP00000016362/1-233  GFGMMLSSVA LLSILVFIPS AVVGVLLLVR MGRKSAGLKK RSKSGSKKSS 
bmy_03278T0/1-225         GFGTMLSSVA LLSILVFIPS AVVCVLLLVR MGRKSAGLKK RSKPGSKKSS 
ENSP00000278949/1-235     GFGTMLSSVA LLSILVFVPS AVVVALLLVR MGRKAAGLKK RSRSGYKKSS 
ENSBTAP00000001630/1-234  GFGTMLSSVA LLSILVFIPS TVVVILLLVR MGRKSAGLKK RSKSGYKKSS 


                          201                                                250
ENSTTRP00000016362/1-233  IEVSADSDQE KDD-CMGKLC VRCAECLDSD YEETY 
bmy_03278T0/1-225         IEVSAEIR-- ----TMKR-- -HVDESLHDR RRVT- 
ENSP00000278949/1-235     IEVSDDTDQE EEEACMARLC VRCAECLDSD YEETY 
ENSBTAP00000001630/1-234  IEVSDDTDQE GDD-CMAKLC VRCAECVDSD YEETY