KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:02 2014 Check: 00 .. Name: ENSTTRP00000010969/1-1021 Len: 1085 Check: 6953 Weight: 1.00 Name: ENSP00000445306/1-1023 Len: 1085 Check: 5295 Weight: 1.00 Name: ENSBTAP00000001646/1-1021 Len: 1085 Check: 5406 Weight: 1.00 Name: bmy_10616T0/1-1054 Len: 1085 Check: 724 Weight: 1.00 Name: BACU002676/1-1021 Len: 1085 Check: 5287 Weight: 1.00 // 1 50 ENSTTRP00000010969/1-1021 MGKGVGRDKY EPAAVSEHGD K--KKAKKER DMDELKKEVS MXXXXXXXXX ENSP00000445306/1-1023 MAFKVGRDKY EPAAVSEQGD KKGKKGKKDR DMDELKKEVS MDDHKLSLDE ENSBTAP00000001646/1-1021 MEKGVGRDKY EPAAVSEHGD K--KKAKKER DMDELKKEVS MDDHKLSLDE bmy_10616T0/1-1054 ---------- ---------- ---------- -MDELKKEVS MDDHKLSLDE BACU002676/1-1021 MGKGVGRDKY EPAAVSEHGD K--KKAKKER DMDELKKEVS MDDHKLSLDE 51 100 ENSTTRP00000010969/1-1021 XXXXXXXXXX XGLTTARAAE ILARDGPNAL TPPPTTPEWI KFCRQLFGGF ENSP00000445306/1-1023 LHRKYGTDLS RGLTSARAAE ILARDGPNAL TPPPTTPEWI KFCRQLFGGF ENSBTAP00000001646/1-1021 LHRKYGTDLS RGLTTARAAE ILARDGPNAL TPPPTTPEWV KFCRQLFGGF bmy_10616T0/1-1054 LHRKYGTDLS RGLTPARAAE ILARDGPNAL TPPPTTPEWV KFCRQLFGGF BACU002676/1-1021 LHRKYGTDLS RGLTTARAAE ILARDGPNAL TPPPTTPEWV KFCRQLFGGF 101 150 ENSTTRP00000010969/1-1021 SMLLWIGAIL CFLAYGIQAA TEEEPQNDNL YLGVVLSAVV IITGCFSYYQ ENSP00000445306/1-1023 SMLLWIGAIL CFLAYSIQAA TEEEPQNDNL YLGVVLSAVV IITGCFSYYQ ENSBTAP00000001646/1-1021 SMLLWIGAVL CFLAYGIQAA TEEEPQNDNL YLGVVLSAVV IITGCFSYYQ bmy_10616T0/1-1054 SMLLWIGAIL CFLAYGIQAA TEEEPQNDNL YLGVVLSAVV IITGCFSYYQ BACU002676/1-1021 SMLLWIGAIL CFLAYGIQAA TEEEPQNDNL YLGVVLSAVV IITGCFSYYQ 151 200 ENSTTRP00000010969/1-1021 EAKSSKIMES FKNMVPQQAL VIRNGEKMSI NAEEVVVGDL VEVKGGDRIP ENSP00000445306/1-1023 EAKSSKIMES FKNMVPQQAL VIRNGEKMSI NAEEVVVGDL VEVKGGDRIP ENSBTAP00000001646/1-1021 EAKSSKIMES FKNMVPQQAL VIRNGEKMSI NAEEVVVGDL VEVKGGDRIP bmy_10616T0/1-1054 EAKSSKIMES FKNMVPQQAL VIRNGEKMSI NAEEVVVGDL VEVKGGDRIP BACU002676/1-1021 EAKSSKIMES FKNMVPQQAL VIRNGEKMSI NAEEVVVGDL VEVKGGDRIP 201 250 ENSTTRP00000010969/1-1021 ADLRIISANG CKVDNSSLTG ESEPQTRSPD FTNENPLETR NIAFFSTNCV ENSP00000445306/1-1023 ADLRIISANG CKVDNSSLTG ESEPQTRSPD FTNENPLETR NIAFFSTNCV ENSBTAP00000001646/1-1021 ADLRIISANG CKVDNSSLTG ESEPQTRSPD FTNENPLETR NIAFFSTNCV bmy_10616T0/1-1054 ADLRIISANG CKVDNSSLTG ESEPQTRSPD FTNENPLETR NIAFFSTNCV BACU002676/1-1021 ADLRIISANG CKVDNSSLTG ESEPQTRSPD FTNENPLETR NIAFFSTNCV 251 300 ENSTTRP00000010969/1-1021 EGTARGIVVY TGDRTVMGRI ATLASGLEGG QTPIAAEIEH FIHIITGVAV ENSP00000445306/1-1023 EGTARGIVVY TGDRTVMGRI ATLASGLEGG QTPIAAEIEH FIHIITGVAV ENSBTAP00000001646/1-1021 EGTARGIVVY TGDRTVMGRI ATLASGLEGG QTPIAAEIEH FIHIITGVAV bmy_10616T0/1-1054 EGTARGIVVY TGDRTVMGRI ATLASGLEGG QTPIAAEIEH FIHIITGVAV BACU002676/1-1021 EGTARGIVVY TGDRTVMGRI ATLASGLEGG QTPIAAEIEH FIHIITGVAV 301 350 ENSTTRP00000010969/1-1021 FLGVSFFILS LILEYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR ENSP00000445306/1-1023 FLGVSFFILS LILEYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR ENSBTAP00000001646/1-1021 FLGVSFFILS LILEYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR bmy_10616T0/1-1054 FLGMSFFILS LILEYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR BACU002676/1-1021 FLGMSFFILS LILEYTWLEA VIFLIGIIVA NVPEGLLATV TVCLTLTAKR 351 400 ENSTTRP00000010969/1-1021 MARKNCLVKN LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA ENSP00000445306/1-1023 MARKNCLVKN LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA ENSBTAP00000001646/1-1021 MARKNCLVKN LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA bmy_10616T0/1-1054 MARKNCLVKN LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA BACU002676/1-1021 MARKNCLVKN LEAVETLGST STICSDKTGT LTQNRMTVAH MWFDNQIHEA 401 450 ENSTTRP00000010969/1-1021 DTTENQSGVS FDKTSATWLA LSRIAGLCNR AVFQANQENL PILKRAVAGD ENSP00000445306/1-1023 DTTENQSGVS FDKTSATWLA LSRIAGLCNR AVFQANQENL PILKRAVAGD ENSBTAP00000001646/1-1021 DTTENQSGVS FDKTSATWLA LSRIAGLCNR AVFQANQDNL PILKRAVAGD bmy_10616T0/1-1054 DTTENQSGVS FDKTSATWLA LSRIAGLCNR AVFQANQENL PILKRAVAGD BACU002676/1-1021 DTTENQSGVS FDKTSATWLA LSRIAGLCNR AVFQANQDNL PILKRAVAGD 451 500 ENSTTRP00000010969/1-1021 ASESALLKCI ELCCGSVKEM RERYTKIVEI PFNSTNKYQL SIHKNPNTAE ENSP00000445306/1-1023 ASESALLKCI ELCCGSVKEM RERYAKIVEI PFNSTNKYQL SIHKNPNTSE ENSBTAP00000001646/1-1021 ASESALLKCI EVCCGSVKEM RERYTKIVEI PFNSTNKYQL SIHKNANAGE bmy_10616T0/1-1054 ASESALLKCI EVCCGSVKEM RERYTKIVEI PFNSTNKYQL SIHKNLNTAE BACU002676/1-1021 ASESALLKCI ELCCGSVKEM RERYTKIVEI PFNSTNKYQL SIHKNLNTAE 501 550 ENSTTRP00000010969/1-1021 PRHLLVMKGA PERILDRCSS ILIHGKEQPL DEELKDAFQN AYLELGGLGE ENSP00000445306/1-1023 PQHLLVMKGA PERILDRCSS ILLHGKEQPL DEELKDAFQN AYLELGGLGE ENSBTAP00000001646/1-1021 PRHLLVMKGA PERILDRCSS ILIHGKEQPL DEELKDAFQN AYLELGGLGE bmy_10616T0/1-1054 PQHLLVMKGA PERILDRCSS ILIHGKEQPL DEELKDAFQN AYLELGGLGE BACU002676/1-1021 SRHLLVMKGA PERILDRCSS ILIHGKEQPL DEELKDAFQN AYLELGGLGE 551 600 ENSTTRP00000010969/1-1021 RVLGFCHLSL PDEQFPEGFQ FDTDDVNFPV DNLCFVGLIS MIDPPRAAVP ENSP00000445306/1-1023 RVLGFCHLFL PDEQFPEGFQ FDTDDVNFPI DNLCFVGLIS MIDPPRAAVP ENSBTAP00000001646/1-1021 RVLGFCHLLL PDEQFPEGFQ FDTDDVNFPV DNLCFVGLIS MIDPPRAAVP bmy_10616T0/1-1054 RVLGFCHLFL PDEQFPEGFQ FDTDDVNFPV DNLCFVGLIS MIDPPRAAVP BACU002676/1-1021 RVLGFCHLFL PDEQFPEGFQ FDTDDVNFPV DNLCFVGLIS MIDPPRAAVP 601 650 ENSTTRP00000010969/1-1021 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI ENSP00000445306/1-1023 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI ENSBTAP00000001646/1-1021 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI bmy_10616T0/1-1054 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI BACU002676/1-1021 DAVGKCRSAG IKVIMVTGDH PITAKAIAKG VGIISEGNET VEDIAARLNI 651 700 ENSTTRP00000010969/1-1021 PVSQVNPRDA KACVVHGSDL KDMTSEQLDD ILKYHTEIVF ARTSPQQKLI ENSP00000445306/1-1023 PVSQVNPRDA KACVVHGSDL KDMTSEQLDD ILKYHTEIVF ARTSPQQKLI ENSBTAP00000001646/1-1021 PVSQVNPRDA RACVVHGSDL KDMTPEQLDD ILKYHTEIVF ARTSPQQKLI bmy_10616T0/1-1054 PVSQVNPRDA KACVVHGSDL KDMTSEQLDD ILKYHTEIVF ARTSPQQKLI BACU002676/1-1021 PVSQVNPRDA KACVVHGSDL KDMTSEQLDD ILKYHTEIVF ARTSPQQKLI 701 750 ENSTTRP00000010969/1-1021 IVEGCQRQGA IVAVTGDGVN DSPALKKADI GVAMGIAGSD VSKQAADMIL ENSP00000445306/1-1023 IVEGCQRQGA IVAVTGDGVN DSPALKKADI GVAMGIAGSD VSKQAADMIL ENSBTAP00000001646/1-1021 IVEGCQRQGA IVAVTGDGVN DSPALKKADI GVAMGIAGSD VSKQAADMIL bmy_10616T0/1-1054 IVEGCQRQGA IVAVTGDGVN DSPALKKADI GVAMGIAGSD VSKQAADMIL BACU002676/1-1021 IVEGCQRQGA IVAVTGDGVN DSPALKKADI GVAMGIAGSD VSKQAADMIL 751 800 ENSTTRP00000010969/1-1021 LDDNFASIVT GVEEGRLIFD NLKKSIAYTL TSNIPEITPF LIFIIANIPL ENSP00000445306/1-1023 LDDNFASIVT GVEEGRLIFD NLKKSIAYTL TSNIPEITPF LIFIIANIPL ENSBTAP00000001646/1-1021 LDDNFASIVT GVEEGRLIFD NLKKSIAYTL TSNIPEITPF LIFIIANIPL bmy_10616T0/1-1054 LDDNFASIVT GVEEGRLIFD NLKKSIAYTL TSNIPEITPF LIFIIANIPL BACU002676/1-1021 LDDNFASIVT GVEEGRLIFD NLKKSIAYTL TSNIPEITPF LIFIIANIPL 801 850 ENSTTRP00000010969/1-1021 PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPQ TDKLVNERLI ENSP00000445306/1-1023 PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPK TDKLVNERLI ENSBTAP00000001646/1-1021 PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPQ TDKLVNERLI bmy_10616T0/1-1054 PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPQ TDKLVNERLI BACU002676/1-1021 PLGTVTILCI DLGTDMVPAI SLAYEQAESD IMKRQPRNPQ TDKLVNERLI 851 900 ENSTTRP00000010969/1-1021 SMAYGQI--- ---------- ---------- -GMIQALGGF FTYFVIMAEN ENSP00000445306/1-1023 SMAYGQI--- ---------- ---------- -GMIQALGGF FTYFVILAEN ENSBTAP00000001646/1-1021 SMAYGQI--- ---------- ---------- -GMIQALGGF FTYFVIMAEN bmy_10616T0/1-1054 SMAYGQIGEL GEATISNLFF WSNGLHRCEH LGMIQALGGF FTYFVIMAEN BACU002676/1-1021 SMAYGQI--- ---------- ---------- -GMIQALGGF FTYFVIMAEN 901 950 ENSTTRP00000010969/1-1021 GFLPTHLLGV RVDWDDRWIN DVEDSYGQQW ---------- ---------- ENSP00000445306/1-1023 GFLPIHLLGL RVDWDDRWIN DVEDSYGQQW ---------- ---------- ENSBTAP00000001646/1-1021 GFLPNHLLGI RVTWDDRWIN DVEDSYGQQW ---------- ---------- bmy_10616T0/1-1054 GFLPTHLLGI RVDWDDRWIN DVEDSYGQQW VSEGCPPDQC RTELPQPQGM BACU002676/1-1021 GFLPTHLLGV RVDWDDRWIN DVEDSYGQQW ---------- ---------- 951 1000 ENSTTRP00000010969/1-1021 ---------- --------TY EQRKIVEFTC HTAFFVSIVV VQWADLVICK ENSP00000445306/1-1023 ---------- --------TY EQRKIVEFTC HTAFFVSIVV VQWADLVICK ENSBTAP00000001646/1-1021 ---------- --------TY EQRKIVEFTC HTAFFVSIVV VQWADLVICK bmy_10616T0/1-1054 GPHGLRTHGL ICLPYAFQTY EQRKIVEFTC HTAFFVSIVV VQWADLVICK BACU002676/1-1021 ---------- --------TY EQRKIVEFTC HTAFFVSIVV VQWADLVICK 1001 1050 ENSTTRP00000010969/1-1021 TRRNSVFQQG MKNKILIFGL FEETALAAFL SYCPGMGVAL RMYPLKPTWW ENSP00000445306/1-1023 TRRNSVFQQG MKNKILIFGL FEETALAAFL SYCPGMGVAL RMYPLKPTWW ENSBTAP00000001646/1-1021 TRRNSVFQQG MKNKILIFGL FEETALAAFL SYCPGMGVAL RMYPLKPTWW bmy_10616T0/1-1054 TRRNSVFQQG MKNKILIFGL FEETALAAFL SYCPGMGVAL RMYPLKPTWW BACU002676/1-1021 TRRNSVFQQG MKNKILIFGL FEETALAAFL SYCPGMGVAL RMYPLKPTWW 1051 1100 ENSTTRP00000010969/1-1021 FCAFPYSLLI FVYDEVRKLI IRRRPGGWVE KETYY ENSP00000445306/1-1023 FCAFPYSLLI FVYDEVRKLI IRRRPGGWVE KETYY ENSBTAP00000001646/1-1021 FCAFPYSLLI FVYDEVRKLI IRRRPGGWVE KETYY bmy_10616T0/1-1054 FCAFPYSLLI FVYDEVRKLI IRRRPGGWVE KETYY BACU002676/1-1021 FCAFPYSLLI FVYDEVRKLI IRRRPGGWVE KETYY