KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:15:03 2014 Check: 00 .. Name: ENSTTRP00000012174/1-439 Len: 540 Check: 3810 Weight: 1.00 Name: BACU005139/1-468 Len: 540 Check: 1857 Weight: 1.00 Name: ENSP00000368924/1-437 Len: 540 Check: 3076 Weight: 1.00 Name: bmy_00853T0/1-537 Len: 540 Check: 4025 Weight: 1.00 Name: ENSBTAP00000001651/1-437 Len: 540 Check: 2328 Weight: 1.00 // 1 50 ENSTTRP00000012174/1-439 MKMLWKLTDN IKYED---CE ---------- ---------- ---------- BACU005139/1-468 -MPGGDPSPG APSRDVHTCQ ---------- ---------- ---------- ENSP00000368924/1-437 --MLWKLTDN IKYED---CE ---------- ---------- ---------- bmy_00853T0/1-537 MKMLWKLTDN IKYED---CE VSAALAQSSS RPQARSRTSR SSSSPRSQLR ENSBTAP00000001651/1-437 --MLWKLTDN IKYED---CE ---------- ---------- ---------- 51 100 ENSTTRP00000012174/1-439 ---------- ---------- ---------- ---------- ---------- BACU005139/1-468 ---------- ---------- -------NGG LAGPSRRHQQ RDGTVAPAGH ENSP00000368924/1-437 ---------- ---------- ---------- ---------- ---------- bmy_00853T0/1-537 VELPAFGEGP FSLPGVFAEK NRLGLLSRGG LRTGTGRFPR SPEPCTQCGS ENSBTAP00000001651/1-437 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000012174/1-439 ---------- --------DR HDGTSNGTAR LPQLGTVGQS PYTSAPPLSH BACU005139/1-468 CRSI------ --------SL HERPAAVPXX XXXXXXAGQP PYRPPPPLSH ENSP00000368924/1-437 ---------- --------DR HDGTSNGTAR LPQLGTVGQS PYTSAPPLSH bmy_00853T0/1-537 CNSTPDFLFS ALALALFQDR HDGTSNGTAR LPQLGTVGQS PYTSAPPLSH ENSBTAP00000001651/1-437 ---------- --------DR HDGASNGTAR LPQLGTVGQS PYTSAPPLSH 151 200 ENSTTRP00000012174/1-439 TPNADFQPPY FPPPYQPIYP QSQDPYSHVN DPYSLNPLHA QPQPQHPGWP BACU005139/1-468 PPNADFQPPY FPPPYQPIYP QSQDPYSHVN DPYSLNPLHA QPQPQHPGWP ENSP00000368924/1-437 TPNADFQPPY FPPPYQPIYP QSQDPYSHVN DPYSLNPLHA QPQPQHPGWP bmy_00853T0/1-537 TPNADFQPPY FPPPYQPIYP QSQDPYSHVN DPYSLNPLHA QPQPQHPGWP ENSBTAP00000001651/1-437 TPNADFQPPY FPPPYQPIYP QSQDPYSHVN DPYSLNPLHA QPQPQHPGWP 201 250 ENSTTRP00000012174/1-439 GQRQSQESGL LHAHRGLPHQ LSGLDPRRDY RRHEDLLHGP HGLGSGLGDL BACU005139/1-468 GQRQSQESGL LHAHRALPHQ LSGLDPRRDY RRHEDLLHGP HGLGSGLGDL ENSP00000368924/1-437 GQRQSQESGL LHTHRGLPHQ LSGLDPRRDY RRHEDLLHGP HALSSGLGDL bmy_00853T0/1-537 GQRQSQESGL LHAHRGLPHQ LSGLDPRRDY RRHEDLLHGP HGLGSGLGDL ENSBTAP00000001651/1-437 GQRQSQESGL LHTHRGLPHQ LSGLDPRRDY RRHEDLLHGP HGLGSGLGDL 251 300 ENSTTRP00000012174/1-439 PIHSLPHAIE DVPHVEDPGI NIPDQTVIKK GPVSLSKSNS NAVSAIPINK BACU005139/1-468 PIHSLPHAIE DVPHVEDPGI NIPDQTVIKK GPVSLSKSNS NAVSAIPINK ENSP00000368924/1-437 SIHSLPHAIE EVPHVEDPGI NIPDQTVIKK GPVSLSKSNS NAVSAIPINK bmy_00853T0/1-537 PIHSLPHAIE DVPHVEDPGI NIPDQTVIKK GPVSLSKSNS NAVSAIPINK ENSBTAP00000001651/1-437 PIHSLPHAIE DVPHVEDPGI NIPDQTVIKK GPVSLSKSNS NAVSAIPINK 301 350 ENSTTRP00000012174/1-439 DNLFGGVVNP NEVFCSVPGR LSLLSSTSKY KVTVAEVQRR LSPPECLNAS BACU005139/1-468 DNLFGGVVNP NEVFCSVPGR LSLLSSTSKY KVTVAEVQRR LSPPECLNAS ENSP00000368924/1-437 DNLFGGVVNP NEVFCSVPGR LSLLSSTSKY KVTVAEVQRR LSPPECLNAS bmy_00853T0/1-537 DNLFGGVVNP NEVFCSVPGR LSLLSSTSKY KVTVAEVQRR LSPPECLNAS ENSBTAP00000001651/1-437 DNLFGGVVNP NEVFCSVPGR LSLLSSTSKY KVTVAEVQRR LSPPECLNAS 351 400 ENSTTRP00000012174/1-439 LLGGVLRRAK SKNGGRSLRE KLDKIGLNLP AGRRKAANVT LLTSLVEGEA BACU005139/1-468 LLGGVLRRAK SKNGGRSLRE KLDKIGLNLP AGRRKAANVT LLTSLVEGEA ENSP00000368924/1-437 LLGGVLRRAK SKNGGRSLRE KLDKIGLNLP AGRRKAANVT LLTSLVEGEA bmy_00853T0/1-537 LLGGVLRRAK SKNGGRSLRE KLDKIGLNLP AGRRKAANVT LLTSLVEGEA ENSBTAP00000001651/1-437 LLGGVLRRAK SKNGGRSLRE KLDKIGLNLP AGRRKAANVT LLTSLVEGEA 401 450 ENSTTRP00000012174/1-439 VHLARDFGYV CETEFPAKAV AEFLNRQHSD PNEQVTRKNM LLATXXXXXX BACU005139/1-468 VHLARDFGYV CETEFPAKAV AEFLNRQHSD PNEQVTRKNM LLATKQICKE ENSP00000368924/1-437 VHLARDFGYV CETEFPAKAV AEFLNRQHSD PNEQVTRKNM LLATKQICKE bmy_00853T0/1-537 VHLARDFGYV CETEFPAKAV AEFLNRQHSD PNEQVTRKNM LLATKQICKE ENSBTAP00000001651/1-437 VHLARDFGYV CETEFPAKAV AEFLNRQHSD PNEQVTRKNM LLATKQICKE 451 500 ENSTTRP00000012174/1-439 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU005139/1-468 FTDLLAQDRS PLGNSRPNPI LEPGIQSCLT HFNLISHGFG SPAVCAAVTA ENSP00000368924/1-437 FTDLLAQDRS PLGNSRPNPI LEPGIQSCLT HFNLISHGFG SPAVCAAVTA bmy_00853T0/1-537 FTDLLAQDRS PLGNSRPNPI LEPGIQSCLT HFNLISHGFG SPAVCAAVTA ENSBTAP00000001651/1-437 FTDLLAQDRS PLGNSRPNPI LEPGIQSCLT HFNLISHGFG SPAVCAAVTA 501 550 ENSTTRP00000012174/1-439 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXKHRK BACU005139/1-468 LQNYLTEALK AMDKMYLSNN PNSHTDSSAK SSDKEEKHRK ENSP00000368924/1-437 LQNYLTEALK AMDKMYLSNN PNSHTDNNAK SSDKEEKHRK bmy_00853T0/1-537 LQNYLTEALK AMDKMYLSNN PNSHTDSSAK SSDKEEKHRK ENSBTAP00000001651/1-437 LQNYLTEALK AMDKMYLSNN PNSHTDNNAK SSDKEEKHRK